Chanodichthys erythropterus (predatory carp): 137006178
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Entry
137006178 CDS
T10334
Symbol
dicer1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
137006178 (dicer1)
microRNA pathway
RISC loading complex
137006178 (dicer1)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137006178
NCBI-ProteinID:
XP_067222839
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All DBs
Position
18:11213370..11251096
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AA seq
1882 aa
AA seq
DB search
MAGLQLVTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGK
TFIAVLLIKELSHQIRGEDRKRTVFLVNAASSVVQQASTVRTHSDLQVGDYMSEEMTTWP
EEIWNREMMGNQVLVMTCHIFLHVLKNGVLPLSKINLLVFDECHLAITDHPYQEIMKICE
GCPGCPRILGLTASILNGKCDPCDLEEKIQNLEKILQSNAETATDLVVLDRYASQPREVV
LDCGLYHDQSGLSDRLLSELDEALHFLNDCNLSTHREDRDPTFISKQVLNDCRAVLTVLG
PWCADKAAGIMVRELQKYIKHEQEELNRKFLLFTDTILRKIHALCEEHFSPASLDLKFVT
PKVIRLLDILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEAEAKEKPEANF
PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPRNKQM
EVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR
APVSNYIMLADSERTKTFEEDLKTYKAIEKILRNKCSKSAECNEFELEPVTDDDNVLPPY
VLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTVELKTGGYRSTLFLPINSP
LRVPVTGPTMNCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEET
NVPGRPGSTKRRQCYPKAIPECLRGCYPVPEQPCYLYVIGMVLTTPLPDELNFRRRKLYP
PEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFTLSAEQLELITRLHQYIF
SHILRLEKPALEFKPVEADSAYCVLPLNIVEDSNTLDLDFKFMEDIEKSEARIGIPNTQY
TKQNPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKT
KYNLDLSNVNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV
PELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGVGAQTLPPDFRYPNL
DFGWKKSIDSKSFISCPSACMEDDDHCKHGSSSDSDHTAEESCSTEASQPPEGALPCENC
NTPDEKLETQVLPVTDVQMLNKDKSNCVCFRNLPNSTWGDSDDLPHRHDICQCSQLGPLE
SDLSTQTTTSVPVRPSPVGEPQPQPQPSDECTPGRNSDLCDRHVKKPTSNRCPKPETATS
TTAPLEVSSEVSDMTSTTTCTGPAWDSPKTLGPNPGLILQALTLSNASDGFNLERLEMLG
DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN
WLPPGYVVNQDKSTTDKWDSDENKDLANGKASDEEDDDDEAEDVEVEPSKEEVNVEDDLE
YYYEHIRFIDNMLIGSGAFGKKISLQPAEPGCEWKAPKKAHNSHFSPDGGADEFDYSSWD
AMCYLDPSKAGEEDDFVVGFWNPSEENCGTDIGKQSISYDLHTEQCIADKSIADCVEALL
GCYLTSCGERAAQLFLCSLGLKVLPAEKQSSGGSAELQYGWLKIPPRCMFDHPDAERTLN
HLISGFENFEKKINYMFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHL
YEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKN
EMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRP
LIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIA
KSAAARRALRSLKANQPQVQNN
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atggctggcctacagctggtgacccctgcctcctcacccatggggcccttcttcggtctc
ccgtggcaacaggaagctatccatgacaacatatacacaccaagaaaatatcaggttgaa
cttcttgaagcagctcttgaacacaatactatagtctgcttaaatactggctcagggaag
acctttatcgcagtactcctaatcaaagaactctcccaccaaatccgtggagaggataga
aagagaacagttttcctggtgaatgcagcatcatctgtggttcagcaagcatctactgta
agaacccactctgatctccaggtaggcgactacatgtcagaggaaatgacaacatggcct
gaggagatatggaacagagagatgatgggaaatcaggtgctggtgatgacgtgccacatc
ttcctgcatgtgttaaagaatggagtcttgccactatcaaaaatcaacctgctggttttt
gacgaatgccaccttgcaatcacggaccatccttatcaggaaataatgaagatttgtgag
ggttgcccgggctgtcctcgcattttgggtctgactgcttccattttaaatggcaaatgt
gatccttgtgatctggaggagaagattcagaacctggagaagattttgcagagcaatgca
gaaactgccaccgatcttgtggtgctggataggtatgcgtcccagcctcgtgaggtggtg
ctggactgtgggttgtatcacgatcagagtgggctctctgataggcttttgagcgagttg
gacgaagcccttcattttcttaatgactgcaacttatctactcatcgagaagatagagac
cccacgttcatctccaaacaggtgctgaatgactgtcgtgccgtgttgactgtgctgggc
ccttggtgcgcagataaagctgcgggaatcatggtccgggagctgcagaaatatatcaaa
catgaacaggaagagctgaaccgcaagttcctgttgttcacggacaccattctgagaaaa
atccatgcattatgtgaggagcatttctctccagcttccctagacctgaagtttgtcact
cccaaggtcatcagacttctggatattctccacgagtacaaaccttttgaacggcagcag
tttgagagtgtggagtggtacaacaatcgcaatcaggacaattacgtttcttggagcgat
tctgaggacgatgacgaggatgaagaggcggaggcaaaggagaagcctgaagcaaatttt
ccctcgcctttcaccaacatcctctgtggaatcatctttgtggaaaggcgatatacagcg
gtggttttaaacagacttattaaggaggcggggaagcaggacccagagctggcttacatt
agtagcaacttcatcacaggtcacagcattggcaagaaccagcctcgcaacaaacaaatg
gaggtggagttcagaaaacaagaggaggtcctgaggaagttcagagctcatgaaaccaac
ttgctcattgcaaccagcattgtggaagaaggtgttgatattccaaagtgcaatttggtt
gttcggtttgacctgccgacagagtaccggtcctacgtgcaatctaaaggtcgtgcccgt
gctccagtctccaattacatcatgctcgctgacagcgaacggacaaaaacatttgaagaa
gacctcaagacctacaaggccatagaaaagatcctccgaaataagtgctcgaagtcagca
gaatgcaatgaatttgaattggagccagtgaccgatgatgacaacgttctcccaccttac
gtcctgcgctcagaggacggaggccctcgcgtcacgattaacacagccattgggcacatc
aacagatattgtgcgcgtttgcccagtgatccgttcactcatcttgctccgaagtgtaaa
actgtggagctgaagactggaggttatcgatccacactcttcctacccatcaactcacca
ctcagagttcctgtcactgggccaacaatgaattgtgcaagacttgcagagaaagctgtc
gctcttctctgttgtgaaaaactgcacaaaattggtgaactggatgatcatttgatgcca
gtgggaaaggaaactgtaaagtatgaggaggagctggacctgcatgatgaggaagagacg
aacgtgccaggaagaccaggctccaccaaacggagacagtgttacccaaaagccatacca
gagtgtctgcgggggtgttaccctgtgccagagcagccttgttacctttacgtcataggg
atggtcctcaccacccctcttcctgatgagcttaacttccggcggaggaagctgtatccg
ccagaggacactacccgatgttttggcattctaacagctaaaccaatacctcggatccct
cacttccctgtgtatacacgttctggtgaggtgaccatctcgattgagcttcagaagtcg
ggcttcactctgagcgcagagcagctggagctgatcacacgtctgcaccagtacatcttc
tcccacatcctccgtctggaaaagccagcactagagtttaagcctgtagaggcagattct
gcctactgcgttctacctctcaacattgttgaggattccaataccttggacctggatttc
aagttcatggaggatattgaaaagtctgaagcacgcattggcattccaaatactcagtac
accaagcaaaacccattcattttcaaattagaggactaccaggatgctgtcatcattccg
aggtatcgtaattttgaccagccacatcggttctatgtggctgacgtttacacagacctc
accccgctcagtaaattcccctctccagagtatgagacttttgctgagtactacaaaacc
aagtacaacctggacctgtctaatgttaaccagcctctactggatgtggaccacacatct
tcaagattgaatcttttaactccccggcaccttaatcaaaaggggaaagcccttcctctc
agcagtgcggagaagagaaaggccaagtgggaaagcctacaaaacaaacagattttagtt
ccggagctttgtgccattcaccccatcccagcctctttgtggaggaaagctgtctgcctt
cccagcattctctacagacttcactgccttctgacggccgaagagctgcggtctcagaca
gccattgatgctggtgttggggctcagaccctgcctcctgatttcaggtatcctaatttg
gatttcggatggaagaaatccatcgacagcaaatctttcatttcctgccccagtgcatgt
atggaagacgacgatcactgtaaacacggctcaagctcagattcagaccacactgccgag
gagagctgcagtacggaggcctcccagcctccagagggcgctctcccttgtgagaactgc
aacacaccagatgaaaagctagaaacccaggtgctccctgtgactgatgtccagatgctg
aacaaagacaagagcaactgcgtctgtttccgaaacctccctaacagcacttggggcgac
agtgacgacctcccacacagacatgacatttgccaatgctctcagctgggccctctggag
agtgacctatcaacgcaaaccactacctcagttcctgtgcggccctctccagtcggcgag
ccacagccccagccccagcccagcgatgaatgtaccccaggcaggaactcagatctctgc
gacagacatgtgaaaaaacctacctcaaaccgttgccccaaaccagagacggcaaccagc
accacagcacctttagaagtgtcatcagaggtatctgacatgacatctacaacaacctgc
acaggtccagcctgggattctccgaaaaccttgggccccaaccccggcctcatcttgcag
gccctgaccctctccaatgccagtgacggcttcaatctggagaggttggagatgttgggc
gactctttcctgaaacacgccatcaccacctacctgttctgcacttatcctgacgcccat
gagggcaggctgtcatacatgagaagcaagaaggtcagcaactgtaacctttatcgcctg
gggaagaaaaagggccttcctagtagaatggtggtatctatctttgatcccccagtaaac
tggcttcctccgggctacgtggtgaatcaggacaaaagcaccacggacaagtgggactca
gatgagaataaagatttggccaacggaaaagccagtgatgaggaggatgacgacgatgaa
gcagaggatgtggaggtcgagccttctaaagaagaggtcaatgtggaagatgatctggag
tactactatgagcacatcagattcatcgataacatgctgattggctccggcgccttcggg
aagaagatctccctacagccggccgagcctggctgtgaatggaaagcacccaaaaaagct
cacaactcccacttttccccagacggtggcgctgacgagttcgactacagttcctgggat
gccatgtgctacctggaccccagcaaagctggcgaggaggatgactttgtggtgggcttc
tggaacccttctgaagaaaactgtggcacggatattgggaaacagtccatctcctacgac
ctccacaccgagcagtgcatcgctgataagagcatagccgactgtgtggaggccctgctg
gggtgctacctcaccagctgtggggagagggcagcgcagctgttcctgtgctcccttggc
ctgaaggtgctcccggcggagaagcagagttcaggggggtcggccgagctgcagtacggc
tggctgaagatccctccacggtgtatgttcgaccacccggatgccgagcggaccctcaac
cacctcatttcaggcttcgagaactttgagaagaagataaactacatgtttaaaaacaag
gcatatcttctgcaggccttcacccacgcctcgtatcattacaacaccataacagattgt
tatcagcggttggagttccttggtgatgcaattttagactacctcataacaaagcacctt
tatgaagatccccggcagcactctccaggcgtgctgaccgacctgcgctctgcacttgtc
aacaacaccatatttgcttccctggctgtcaagtacgattaccacaagtacttcaaagct
gtctcgcccgaactgttccacgtgatcgatgattttgtgcaatttcaactggagaagaat
gaaatgcaaggaatggattcggagcttcgccgatcggaagaagatgaggagaaggaagaa
gacattgaggtccccaaagcaatgggagacatctttgaatcgctagctggtgcaatttac
atggatagcgggatgtcacttgagacagtttggcaagtgtattatccaatgatgaggccg
ctcatagaaaaattctccgctaatgtccctcgatccccagtgcgtgaactcctggagatg
gaaccagagactgcgaagttcagccctgcggagagaacctatgatggaaaagtacgggtg
accgtggaagtggtgggcaaaggcaagttcaaaggcgtgggacgcagctaccggatagcc
aagtcagcagctgcccgccgagccctgcgcagtctcaaagccaatcaacctcaggtccaa
aacaactga
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