Chanodichthys erythropterus (predatory carp): 137006218
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Entry
137006218 CDS
T10334
Symbol
jmjd1ca
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cery03036
]
137006218 (jmjd1ca)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
137006218 (jmjd1ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
FYVE
zf-UDP
C1_2
Motif
Other DBs
NCBI-GeneID:
137006218
NCBI-ProteinID:
XP_067222927
LinkDB
All DBs
Position
18:complement(29554106..29619212)
Genome browser
AA seq
2639 aa
AA seq
DB search
MAVELVGKRCLCVSGGEPLELASVSRWSWRAGVIRAITDSPALTVCVHWDDEQSAERKWR
RLREECEVVLLEQELVWAAKRTGTNGSSSAQEKRRLHPALRFRPLIGQSCVGGLSVVEFI
SDRQLEFYTEKEDLQPFEDEVGDGNPAVRDDPSLQEQVQAWLKQNQFQNILQQGTYKLCQ
MSMIITGACSLNGLRVKVFRQESKTQWLPGVIAHYDQNKRTVAVMTDQVRETVNIDPLLV
QVVLLDDITHSSIMGDNSKRKSHITKINRIFLGTESISNNTTTNEQLCTSRAMQQQSAPS
SQNCGLEDDEKEGMRDGKRSDEGRDSSKSKNSNGERKRKKDDEEKDDKQRTRCGLKRLKA
CSVVSDLSENTDSENSSCRVQDSSSDSGSKRQLKQHYTSKRSLDCEVHLSHKGGEHSPGQ
LGECETQKLGKTPPTDFPSESCNGAFRKTEAQECAAGVSGGKSNEKGDGGTTEIEDRTEG
ASREDSEAVSALLASQESEQLVSMETTCVLLHASPLECEGAEGEHEMSTNDPEVRGSEFT
HAEAKGSEFNQSEVKRSEFPHCVAITTSNDTAVTVEEEPRGASPHSPVKPCSKKEDDDSK
RRCSPEAVNAEYGPVISLEATHKPSVHVSPCSSPEIISKPQNVQEISRQQSASLEMLKED
TPLLKSMDRTLSSLKMPPNLKMTCSATPVLTQTPSPSPNRSRTPTHSPPCTPNRTPTPDK
SSKSPLIVDRKEPFTIYRDPALVRAELEAHPTYIQPPHTPPNPKHHLKAPSPSSSSPSLT
PTSSHSKLLSPSPHPAHLSPIPLHSQPPLCSLSSPHSTIPHPHLLPSLLPALPPSGALLA
GHPRIGAMGLPHHPLALSGNPSLMGQTSGAAPLAPLGLYPLLWPPFPNGAHSYPGLGLQA
SKWTHPDGTGISDSNVRRNPSSPWLSQPTPVTNADGQGMQPPLPIRPSSADPQRASRSTQ
HCMPSSKTTEELDRRAVAESTLIHTHFKSEQERVRAALGKNGQSYSPVPPESPPSRTKQS
LVVYDLTGERPNCYQEENRRILLESSEVAPFTAKLGSDREPRYPRSPTSVLPSKEREREM
DRERDQERKRDVHAFRHTLPPRPHSAHPTPTLTPSSYYTSLSNSIENKPPQRRVPASKEL
YERLSASNTVTPVLTSSSSQVSMRARPPPLIKRHHEKEEGLLGKITEQLAHKASSMEAVE
VATVERRGPGSSLISVSSCPRNVPLLHRAPIFHPPAPTILVSKDSGHGRLSPPTLTPIQP
MSLSGKGQKQQRPPTLLPELKHVTLDGKRPVPEKATSLQACDNQWGGVMFGREKVGGGHT
TNGGVIKPQSATASVIVRPTSHTHATINYTVSDSSVSQVHCGHIKPLESLSNPHSKEGSV
QHKRGVLWTPMDTVHPINMTAQKGDLNTPINMTTKPINTDQPSHRATHPLINMNATCSRI
DLIAEHCKRRDGLAVQPKMEPSPTSGCISRDFPHLKKHRAGLVTAESRLNTHMIQPQHTT
HPLNTMKHTSLLSNSRYGTCTTLTTHTVCSTHASEREKESVFNTSNSECFRLASGTSSPV
PTTKQGLLANEQISASAVTNQSAQFSQNNYHKLKKAWLTRHSEQDRGSTASQTIDGTKTA
VTLTSTSTSVPIKQEVNGLVDNWCTQEDKDSSLDSRKSKIIDKKPTQDNWKSGLEDRKSN
SNGTSFNSEDKKSVIAYEKPVIAGKKSSLDDVKPVLDRNGKLECKESFVEDKKANEKQST
PTHIKPEREKRGEKRPLESCGNSESGGDSGNESESGGSGRGFKRPSKSSFKIKPNDNQKK
KVDEEEKEEEAKPNGTLQSANDKPQQRLANSNGIPRSVLKDWRKVRKLKQTGETFLQDDS
CKEIGTNVQKCRECRLDRSRKSQEPAISPVFCRFYYFRRLSFSKNGVVRADGFSMSEQTD
EEAVTVWTGSSEDEEDKKKREMDLETSKSVLALIGDKFCQLIKTEDTAFTWVKKDTQIMW
KRAVRGVREMCDACEATLFNMHWACHKCGFVVCMDCYKAREKKKSKDKELYVWVRCVKNQ
PHDLKNLMPTQIVPETVLADMQSSMHSMKEKFGISSHCPCTDDKTLNPSAATTNGLSPLS
DKDQSDLKSRQIPDQQKNSQNVTLRAHTERREKAECDSRKSVSPEQGSTLRDLLTSTAGK
LRLGSAGGAFAPVFNMSEQVTQNTRMPNILDDIIASVVENKIPATKMARMGLNQDLLPEE
EVGQRPEGVKLDESPLADPHTVVPHNWLGNHRLLWLKDHRHQGNQRLFKENWTQEQPVLV
SGLHKSLNANLWKPEHFSREFSSLHSDLYNCRDGSVTNSKVKEFWDGFEDVSKRPKSAKG
ESVVYRLKDWPSGEEFLALMPARYHDVMKSLPVPEYTDPEAHLNLASHLPSFFIRPDLGP
RLCCAHGITTCPEQDFGTSNLHVEISDTMSILVYVGVAKGNGAPSKAGVLKLLEGEFLDE
SVKKRMKDPNEMPGALWHIYMSKDLQKIQEFLQKVAAEQQTEADPGTDSDSEWDSDADPL
REGGWYLSPRLRKKLQEEYGVESRTLLQFHGDAVIIPAGALHQVMNLHSCIQVNVDFVSP
EHAHNSYYLTQELRLLKDQVNYEDKLQVKNIFYHSVKDAVATLRKHLKENTDELKQEKS
NT seq
7920 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagctggtggggaagcgctgcctgtgcgtgagcggcggagagccgttggag
ctcgcgagtgtctcgcgctggagctggagagccggagtcatccgcgcgatcactgactcg
cctgcgctgacggtgtgtgtgcactgggatgacgagcagagcgcggagaggaagtggagg
agactccgagaggaatgtgaggtggttttgttggagcaggaactcgtctgggccgccaag
agaaccggcacaaatggcagcagcagtgcccaggagaagaggagactgcatcccgccctg
agattccggcctctgattggtcagtcatgcgtgggaggcttgtcggtggtggagttcatc
tctgacagacagctggagttctacacggaaaaagaggatctccagccatttgaggatgaa
gtgggcgatggaaatccggctgtgagagatgatccttctctgcaggaacaggtccaggcc
tggctcaaacagaaccaattccagaacattcttcagcaagggacatacaaactgtgtcaa
atgtcaatgataataacaggtgcttgttctcttaatggccttagagtgaaagtgttcaga
caggagtccaaaacccagtggcttcctggagtcatcgcacattacgatcagaacaaaaga
accgtagctgtcatgactgaccaggttcgagagactgtgaatatagatccgttgctggtt
caggtggtgttactagatgatatcacccactcctcgataatgggagacaactcaaaacgc
aaatcacatatcaccaagatcaataggatttttcttggcacagaaagcatatcaaataac
actacaacaaatgaacagttgtgcacctccagggcaatgcagcagcaatctgcgccgagc
tcacagaactgcggcttggaagatgatgaaaaagaaggaatgagggacggaaagaggagt
gatgagggaagagattcttccaaatctaaaaacagcaatggtgagagaaaaaggaagaaa
gacgatgaggaaaaagatgacaagcagagaacaagatgtgggttgaagaggctgaaagcg
tgcagtgtggtgtccgacctgtctgagaacactgattctgaaaattccagctgcagagtg
caggattcatcctcggattcaggatcaaagagacagctgaaacagcattacacttcaaag
agatcattggactgtgaggttcacctctcccataaaggcggggaacattcccccggccaa
ttaggagagtgcgagactcagaaattgggaaaaactcctccaaccgatttccctagtgaa
tcctgcaatggggcattcaggaaaacagaggcacaggagtgtgctgctggtgtcagtggt
gggaaatcaaatgagaaaggtgatggaggaacgacagaaatagaagacaggactgagggg
gcgtctcgggaggactcggaggccgtgtctgcactgctggcatcccaagagagtgaacag
ctggtctccatggaaaccacgtgtgtgctgctacatgcatcacctctggagtgtgaagga
gcggaaggtgagcatgagatgtcgacaaatgatccagaggtcagagggtcagagttcacc
cacgcagaagctaaggggtctgagtttaaccaatcagaggtcaagaggtcagaatttccc
cattgtgtggctattaccaccagcaatgacactgcggtcacagtagaagaggagccaagg
ggtgcatcccctcactctcctgtcaaaccttgcagcaaaaaggaggatgatgattctaaa
cggagatgttctccagaagctgtgaacgcagaatacggacctgtcatttctttggaagct
acccacaagcctagtgtgcacgtcagtccttgctcctctcccgagatcatatcgaaacct
cagaatgtacaggagatttccagacagcagagtgcatctctagagatgttgaaagaggac
actcctctgcttaaatctatggacagaacccttagcagccttaaaatgccacctaatctg
aaaatgacctgctctgcaactccggtcctgactcagactccttctccatccccaaaccga
tccagaaccccaacacattctcctccctgtacacctaatcgcactcccactccagacaag
tcctccaaaagtcccctcattgttgacaggaaggagcctttcactatatacagagaccct
gctttagtcagggcagagcttgaggcccaccccacctacatccagccccctcacacaccc
ccaaaccccaaacaccacctgaaagcaccatctccctcctccagctcacccagccttacc
cctacttcctcccacagcaagctactgagtccctcccctcatcctgcacatctctctccc
attcccctccactcccagcctcccctctgctccctgagctcaccccactcaaccatccct
cacccgcacctccttccatcccttctgcctgcgctgcccccatctggcgcactcttagct
ggacatcctcgtatcggagctatgggccttccccaccatcccttagccctttcaggtaac
ccatctctcatgggccagacctctggtgcagctcctctggcacctcttggcctatatccc
ctcctgtggcctcctttccccaatggagcccatagctaccctggactgggcctgcaagca
tccaaatggacacacccagatggcactggtatctctgacagcaacgtgaggaggaacccc
tcaagcccttggctttctcagcccacccctgttactaatgcagatggtcaagggatgcaa
ccaccactccccatccgaccctccagtgcggaccctcagagagcatctaggagcactcaa
cattgcatgccctcctccaaaaccacagaagagctggatagaagagctgtcgccgagagc
acactcatccacactcacttcaagtctgaacaggagcgtgtccgtgcagcattgggcaaa
aatggacagagttactccccagtcccccctgagtcgcctccaagtcgaaccaaacagtca
cttgttgtttatgatctcacaggtgagagacccaactgctaccaagaagagaaccggcgc
attcttctggagagcagtgaggtggcaccgttcactgctaaactgggctcggatagggaa
ccgcgataccctagaagccccacatccgtccttccttccaaggagagggagagagagatg
gacagagagagagaccaggagagaaagagagatgtgcatgcattcagacacactcttcct
cctcggccacattcggcccatcccaccccaaccctcactccgagcagctactacacatct
ctgtccaacagtatagagaacaagcctccacagcgcagagtgccagccagcaaagaactc
tatgagaggctcagtgccagcaacactgttacccctgtcttaacttcttccagctcacag
gtctcaatgagagccagacctccacctctcattaaacgccaccacgagaaagaagaaggt
ctcctgggaaagatcacagagcaacttgcacataaagcatcttccatggaagcagtagag
gtagcgactgtggagagaagggggccaggctcttctctcatttctgtctcctcttgtccc
cgcaatgtgcctttacttcaccgtgcccctattttccaccctccggcaccaaccattcta
gtttctaaagattctggacatggcagattgtccccacctactctcacacccattcagcca
atgagcttgtctggtaaaggtcagaagcaacagaggccacccaccctgttgcctgagctc
aaacatgtcaccttagatggtaaaagacctgtgccagagaaagcaacttcattacaagcc
tgtgataaccaatggggtggagtcatgtttggcagagagaaagtaggtggtgggcacaca
acaaatggaggtgtaatcaaacctcagtcggccactgcgtcagtcattgtacgaccaaca
agtcacacacatgcaacaataaattacacagtgtccgacagctcagtttcccaggtgcat
tgtggccacataaagccattggaaagtttatccaacccacactctaaggagggcagtgtt
cagcataagagaggtgtcctgtggactccaatggatactgttcacccaatcaacatgact
gcccaaaagggagatctcaacacacccataaacatgacaaccaaacctattaacacagat
caaccgagtcacagagcgacacaccccttaataaatatgaatgccacatgctctaggata
gatctgatcgcagaacactgcaagaggagagatggtctagccgttcaaccgaagatggag
ccctctcccacctctggttgcatttctagagacttccctcatctgaagaaacacagagct
ggactagttactgctgaatctagacttaacacacatatgattcagcctcaacacactaca
catcctttaaacactatgaaacatacctctctcctctcaaatagtaggtatgggacttgc
actacactcactacacacactgtgtgttctacacatgcttctgaaagagaaaaagagtct
gtattcaacactagcaattctgaatgtttcagactggcatcagggacttctagcccggta
ccaacaaccaaacaaggtttgctagccaatgagcagatatctgcttcagctgtaaccaac
cagtcagctcaattcagtcagaacaactaccataaactgaaaaaagcctggctgacccgc
cattctgagcaagatagaggcagtacggcctcccagacaatagatggcactaagacagct
gtaactttgaccagcacaagcacctctgtgccaatcaaacaggaagtgaatggactggtg
gataattggtgcactcaggaggacaaagattcctccttagacagcagaaagtccaaaata
attgacaagaagcctactcaagacaactggaagtctggtttagaggacaggaagtctaat
agtaatgggacaagtttcaattcagaggacaaaaaatctgtcatagcctatgagaaacca
gtgatagcaggcaagaagtcttccttggatgatgttaaacctgtcttggacagaaatgga
aagctggaatgtaaggagtcctttgtggaggacaagaaagcaaatgaaaaacaatcaacc
ccaacacatataaagcctgagagggagaaacgaggcgagaaacgcccattagagtcctgc
ggtaacagcgaaagtggaggagactccggcaatgagagtgagagtggtggatcaggacgg
gggtttaaacggccctctaagtcctcttttaaaataaagccgaatgacaaccagaagaag
aaagtagatgaggaggaaaaggaagaagaggccaaacccaatggaactttgcaaagtgca
aatgataagcctcaacagaggctcgctaacagcaatggcatccctcgctctgtgctgaag
gactggaggaaggtgagaaagctcaagcaaactggagaaactttcttgcaggacgactca
tgtaaagagatcgggaccaatgtgcagaagtgccgagagtgtcgcttggatcgctcacgt
aaatctcaggagcctgccatctcacccgtcttctgccgattttactacttccgacgtctg
tcgttcagtaagaatggcgttgtccgtgcggatgggttttcgatgtctgagcagacagat
gaggaggcggttacagtgtggacgggcagctcagaggacgaggaggataagaagaagaga
gagatggaccttgagacatcaaaatctgtccttgcgctcatcggagacaagttctgccag
ctcataaagacagaggacactgctttcacctgggtcaagaaagacacccagatcatgtgg
aagcgagcggtgagaggtgtgagggagatgtgtgatgcgtgcgaggccactctcttcaac
atgcactgggcgtgtcacaaatgtggctttgtggtttgcatggactgctacaaagccagg
gagaagaagaaatccaaagataaggagctgtatgtctgggtccgatgcgtgaagaaccag
cctcatgacctgaagaacctaatgcctactcagattgtacctgaaacagtgttggcagac
atgcagagctctatgcactcgatgaaagaaaagtttggaatctcatcccattgtccctgc
actgacgacaaaaccctcaaccccagtgcggccactaccaacggactctcaccactttca
gacaaagatcagagtgacttgaagagccggcagatcccagatcagcagaagaactcacag
aatgtcacactgagagcacacactgagagaagagagaaggccgagtgtgacagtaggaag
tccgtgagccctgaacaaggatcaacattgcgtgaccttttgacctccacagctgggaag
ttacgccttgggtctgctggaggtgcttttgcaccagttttcaacatgtctgaacaggta
acccagaacactcgcatgcccaacatcctggatgacatcattgcttctgtagtagaaaat
aagattcccgctacaaagatggccaggatggggctgaatcaggatttgctgccagaggag
gaggtggggcagaggccagagggggtaaagcttgacgaaagcccattggctgatccccac
accgttgtccctcacaattggctaggaaaccaccggctgctttggctcaaagatcaccgt
caccaaggcaaccaaagactgttcaaagaaaactggacacaagagcagccagtgctggtg
tctggattgcacaagagtttgaacgctaatctgtggaagcctgagcacttcagtcgtgag
ttctccagcctccacagtgacctgtacaattgcagagacggaagcgtcacaaactccaag
gtcaaggagttctgggatggttttgaagatgtgtcaaagaggcctaaatctgctaaaggg
gagtcagtagtgtatagactgaaagactggccatcaggggaggagtttttggcactcatg
cctgccagatatcatgatgtgatgaagtctttgccagtaccagaatacacagacccagag
gctcatctgaacctagcctcacatctgccctccttcttcattcgacccgaccttggtcct
cgcctctgctgcgcccacggcataacaacatgtccagagcaagatttcgggaccagtaat
ctacatgttgaaatctcagacaccatgagtattctggtatatgttggagtggctaaagga
aacggagccccatccaaagcaggtgtattgaagctcttggagggggaatttctggatgag
agtgtgaagaaacgaatgaaagaccctaatgagatgccaggtgctctgtggcacatctac
atgagcaaagacctacaaaagatccaggagttcctacaaaaggttgctgctgagcagcag
accgaagcagatccagggacggactcggactcagagtgggatagtgatgccgaccccctg
cgtgagggcggatggtatctgagccccaggctaagaaagaagttacaagaggaatatggc
gttgagagccgcacactcctccagttccatggagatgctgttatcatccctgctggagct
ctgcaccaggtgatgaatctgcacagttgcatccaagtgaatgtagactttgtgtcccct
gaacatgcgcacaactcctattatctaactcaagagctccgccttctcaaagaccaagtg
aactatgaagacaaactccaggtgaaaaacatcttttatcactctgtgaaagatgctgtg
gccacattgaggaaacatttaaaggagaacacagatgagctaaaacaggagaagtcctga
DBGET
integrated database retrieval system
