Chanodichthys erythropterus (predatory carp): 137006322
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Entry
137006322 CDS
T10334
Symbol
vps39
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04140
Autophagy - animal
cery04142
Lysosome biogenesis
cery04145
Phagocytosis
cery04148
Efferocytosis
cery05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
137006322 (vps39)
04142 Lysosome biogenesis
137006322 (vps39)
04140 Autophagy - animal
137006322 (vps39)
04148 Efferocytosis
137006322 (vps39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
137006322 (vps39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137006322 (vps39)
Membrane trafficking [BR:
cery04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
137006322 (vps39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
VPS18_solenoid_2nd
CYP38_PsbQ-like
Motif
Other DBs
NCBI-GeneID:
137006322
NCBI-ProteinID:
XP_067223065
LinkDB
All DBs
Position
18
Genome browser
AA seq
875 aa
AA seq
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MHDAYEPVPILEKLPLQIDCLAAWDDWLLVGTKPGHLLQYRIKKDAGTNRFEVTLEKSNK
NFSKKIQQLFVVSQYKILVSLLENNIHVHDLLTFQQITVVSKARGATLFACDLQKSSSGE
AKLRMCVAVKRKIQLYYWKDREFHELQGDFAAPDIPKSMAWCENSICVGFKRDYYLIRMD
GRGSVKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTLEPRLLVQSVELQRPRFITSAGSNVVYVASNHFVWRLVPVSI
ASQIRQLLQDKQFELALQLAKMKDDSDADKRQQIHHIQNLYAFNLFCQKRFDDSMQGFAK
LGTDPTHVIGLYPDLLPSDYRKQLHYPNPLPALSGAELEKAHLALIDYLTQKRSHLVKQL
NDSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES
EYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGVENLG
IIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDKVLNFLKEGFKELAIPYLEHIIYMWE
ETRPEFHNVLIQLYLEKVQGLMKVYLNSLPEGVSAVAAGKEVGELGEFRNKLLTFLEVSS
SYEPERLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHSHYDPTAN
GNKDVYLSLLRMYLSPPDVHFLGPIKMELCEPQANLQAALKVLQLHHSKLNTTKAINLLP
ANTQIREIQVFLENVLEEKAGRKRFDQILKSLLQAEFLRVQEERIFHQQVKCVITDEKTC
RVCKKKIGNSAFARYPNGVVVHYFCCKDRSMCPAE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgcatatgaaccggttcctattctggagaaattacctctgcagattgactgt
ctggcggcatgggatgattggctccttgtcgggaccaaaccgggtcatctccttcagtac
aggatcaagaaagatgcaggcacaaataggtttgaagttacattagagaaatccaataag
aacttctcaaagaagattcagcagctgtttgtggtttcgcagtacaagattttggttagt
cttctggaaaataacatccacgttcatgacttgctgacgttccagcagataactgtggtg
tccaaagccagaggggccacactgtttgcctgtgacctgcagaagtccagctcaggtgag
gccaaactgcgcatgtgtgttgcagtcaagaggaagattcagctgtattactggaaggac
agagaattccatgaattacagggagatttcgccgctccagacattcccaagtccatggct
tggtgtgagaactctatatgcgtgggtttcaaaagagactactatctgatccggatggac
ggacgtggctcagtcaaggaactgttccccacggggaaacagctggaaccattggtggcc
cctttggctgatgggaaggtagcggtgggtcaggatgacctcacagttgttttgaacgaa
gaaggcgtctgcactcagaaatgtgcccttaactggacggacattcctgttgcgatggag
caccagccaccttacatcattgcagtgttgccacggtatgtggagatccgcaccctcgaa
cccagactgctggtgcagagcgtagaactgcagagaccacgtttcatcacctccgctgga
tcaaatgttgtctatgtcgctagcaatcattttgtttggcgtctggtgccggtctctata
gccagccagatacggcagctgctacaggacaaacagtttgaactggcgcttcagctagcg
aaaatgaaggatgattcagatgcagacaagagacaacagatccatcacattcagaacctg
tatgccttcaacctgttctgtcagaagcgctttgacgactccatgcaggggtttgcaaag
ttaggcacagatcccactcatgttataggactgtatccagacctccttccctctgactac
cgcaaacagctgcactaccccaaccctctgcccgcgctgtctggagccgagttggagaaa
gcccacctagcccttatagattacttgacacagaaacgcagtcatttagtgaagcagctg
aatgactcggacccctctaccacctcccctctcatggagggaacccccaccatcaagagc
cgcaagaaactccttcagatcatcgataccaccctgctcaaatgttacctccataccaat
gtagccttggtgtcgcctctcctgcgcctggagaacaaccactgtcacatagaggagagc
gagtatgtgttaaagaaagctcataaatacagcgaactcatcatcctctacgagaagaaa
ggccttcatcagaaagctctgcaggttctgctggatcagtccactaaagccaactctccc
ctgaagggtcatgagagaactgtacagtatcttcagaggctgggtgtggagaacctgggc
atcatatttgagttttcaccatgggttctgaagatttgtcctgaggatggactgaagatc
ttcactgaggacctgacggaggtggagactctacccagggataaggtgttgaacttcctg
aaggaggggttcaaggagctggccatcccatacctggaacacatcatttacatgtgggaa
gagacacggcccgagttccacaatgttctgatccagctgtacctggagaaggtgcaaggc
ctcatgaaagtgtacctcaactcactgcctgaaggtgtttcagctgtagctgcaggaaag
gaggtgggagagcttggagaattccggaacaagcttctgacatttctggaagtttccagc
agctatgagccagagagactcatcagtgatttcccttttgacggtctgttggaggagagg
gctctgctcttgggtcgtatggggaaacatgagcaggctctcttcatctatgttcacatt
ctgaaagacacacgtatggctgaagagtactgccacagtcattatgatccaacagcaaac
ggcaataaagatgtgtatctgtccctcctgcgcatgtatctgtctcctccagatgtgcac
ttcctcgggcccattaagatggagttatgtgagccacaagcgaacctccaggcagccctg
aaagttcttcagcttcaccacagcaaactgaacaccaccaaagccataaacctgctgcca
gccaacacacagatccgcgagatccaggtcttcttggagaatgtgttggaggagaaggct
ggaaggaagcgctttgaccagatcctgaagagcctcctacaggctgagttcctgcgggtg
caggaggaacgtatctttcaccaacaggtgaagtgcgtcatcacagatgaaaagacctgc
agagtgtgcaagaagaagatcgggaatagtgcctttgccaggtatccaaacggtgtggtg
gttcactacttctgctgtaaagatcgcagcatgtgtccagcagagtag
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