Chanodichthys erythropterus (predatory carp): 137007105
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Entry
137007105 CDS
T10334
Symbol
scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8
KO
K13191
RNA-binding protein 16
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
Transcription machinery [BR:
cery03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
137007105 (scaf8)
Spliceosome [BR:
cery03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
137007105 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137007105
NCBI-ProteinID:
XP_067224511
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Position
18:complement(4350674..4399190)
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AA seq
1285 aa
AA seq
DB search
MEAVKAFNGELYSLNEYKPPISKAKMTQITKSAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSKNIINTFQNLYRCPTDDKSKIVRVLNLWQKN
SVFKSDIIQPLLDMAAGLPPPSVTPVSASSAVPVNSTTPGTPATPATPANIVQSLPDWAS
QISNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAAAANTLNPLEQRVSSFNKKLLGQFDFGNESEHSEDSKKDSTSSQLPVVSDSINSSIF
HQLAEHLQQQNLEQFQKQLMEHQQHQQKSMTMESQDAIFGPESSAPPGQSSAPPQLPEQE
AKMDDSIDNQQQDMDIDEGQDTVDEELFEAEEKKTSSTRSRTRSRSRSRSPKRRRSRSRS
GSRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSKVLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRALQKLSTGSYKIG
SKVIKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLDDFAEGGMIDQETVNNEWE
SQRNTETAKETQSQAVTAETRTTSSTPSEAFTQPVTMMPMQIPVAQTVSAVGLVPPSFPV
TMAVPPPGFGPPPPFLRAGFNASQPPPGFMATPGVGPSAVGTSLASAQTSLVQPSLPTTQ
ENSKDSPFGAMIPPTSTIPGSFMPSAMPGAGVFNPVGAQHQQSSTDKPPQSAETMEAASE
ITLQGMHNAVRSGMGLLGMHPSASLTHPLSGQRMAGLLPLELRPNLLQGPGGRFPLLMQP
GLAHQANNVLDASLQAQARVRVPFSQMEQFNRAEGNFARAPNPSSAGPDSLAKANNETPP
RSDVGGQQEGDQDYRFPPPEKQSTGLLKTPPLEMRTEPVPARPPLLERPPRAVDGREGRR
ENMSGGFRTESRWGPPRGDFDERDMRGMSAGPPKGFQEDRSNPNFQGRFDGRGGNSSGPA
WNRGTGPSFNANMHQDYDDRRRPWERQKDRDDRDMDFRGEMNGNRHSRERDRERERERDR
NRDRERARERNRERERERDRERENEKDKERERWTPLSSQSQPQPLLPQPKSQPLLPLPTP
LLAQPQAQEQAQNNLPSPPPVPVPQHQPHTEPKPDAELQPEEKPESLSPPKESPSTQEQE
EASFVNGTEADSKPQLDISEPASQTATEPSRSPSPSLTSANEPSKEEKTPEMCVSSPVDA
DTKQTGPKVNAETEPELEKTDTEET
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaggcgtttaacggcgagctgtactcactgaatgaatacaaaccacct
atctccaaagcaaagatgacccagattacaaaatctgcaataaaagctataaagttctac
aaacatgtggtccaaagtgtggagaaattcattcaaaagtgcaagcctgagtacaaagtc
cctggtctgtatgtcatcgactccattgtacggcagtctcgtcaccagtttggtcaagag
aaagatgttttcgctccacgctttagtaagaacatcattaacacgttccaaaacctctac
cgctgcccgacggatgacaagagcaagattgtccgtgtgctcaatctgtggcagaaaaac
agtgtctttaagagtgacatcatccagcctctactggatatggcagcagggctcccaccc
cccagtgtcacgcccgtctctgccagcagtgctgtacctgtcaacagcactactcctgga
actcctgcaactccagccactccagccaacatagtgcagagtctcccggactgggcatct
cagatttccaacacagacacagtggcagcggttgcccagatcttacaaagtcctcagggc
cagcagttgcagcagctggttcagagcctgcagatgcagcagcagaagcctcagccgtcc
ctgctgcaggcgctggatgcgggtttggtggtgcagctgcaggccctgaccgcacagctc
actgcggccgcagcagccaacacgctcaacccgctggaacagagggtttcatcctttaac
aagaagctgttgggtcagttcgatttcgggaatgagtcggaacacagcgaggattccaag
aaagattctacgtcatctcagttacctgtggtgtcagattccatcaatagctcaatattt
catcagctggccgagcatcttcagcagcaaaaccttgagcagtttcagaaacagctaatg
gagcaccagcagcatcaacagaagtccatgaccatggagagccaggatgccatctttggt
cctgaaagttctgcccctcctggccaaagcagtgccccaccacagctcccagaacaagaa
gcaaaaatggatgactccattgataaccaacaacaagacatggatattgatgagggacag
gatactgtagatgaggagctctttgaggctgaggagaagaaaaccagcagcacccgttca
aggacacgctcaagatctcggtccaggtcacctaagagaaggaggtcaagatctcgttca
gggtctcggaagcgcaaacacaggaagcgatcgcggtctcgatcaagggacagaaagagg
aagtcctcccgttcttactccagtgagcggcgagcgcgggaaagagaaaaggaacggcag
aaaaaaggacttcctcctatccgctcaaaggttcttagtgtttgcagcactaccctatgg
gttggtcaagtggacaagaaggccacccaacaagatcttactaaccttttcgaagagttt
ggtcagattgaatctatcaacatgattcctcccagaggctgtgcttacatctgtatggtc
catcgtcaggatgcataccgtgctcttcagaaactgagcacgggctcctacaaaattggt
tcaaaggtcatcaaaatcgcttgggccctcaacaaaggggtgaaacaggagtacaagcag
ttctgggatgtggaccttggggtcacttatattccatgggagaaggtcaaactggatgac
ctagatgattttgcagagggaggcatgattgaccaggagaccgtcaacaacgaatgggaa
tcccagaggaatactgagacggctaaagagactcagagtcaggctgttacagctgaaacc
aggacaaccagcagcacaccaagtgaggccttcacacagcctgttacgatgatgcccatg
cagattccagtggcacagacggtctctgctgttggccttgtgcctccatccttccctgtc
accatggcagtgcccccaccagggtttggtcctcctccaccctttctgagggcagggttt
aacgcctcacagcctcccccaggttttatggccacaccaggagtaggaccgtcagcagtt
ggaaccagtcttgcttcagctcagacatctctagtgcagccttcattgccaaccactcaa
gagaacagcaaagattctccgtttggagccatgattcctcccaccagtactattcctggg
agttttatgccatcagcaatgcccggggcaggagtctttaaccctgtgggagcacagcat
cagcagagcagcacagacaaacctcctcagtctgcagaaactatggaggccgcttctgag
ataacactacaaggaatgcataacgcagtgcgcagtggaatgggtctgctgggtatgcac
ccctctgcatctctaacacaccctctctctggtcagaggatggcagggctgcttcccctg
gaactgcggcccaacctgctccagggacccggcggccgcttccccctgctcatgcagcca
ggtcttgctcatcaggccaataacgtcctggatgcctcgcttcaagcccaagcccgtgtt
cgggttccgttctctcaaatggagcaattcaaccgcgccgagggcaattttgcaagagcg
cctaacccctcatctgctgggcctgacagtctggccaaggccaataatgagacaccgccc
aggtcagacgtaggtggccaacaagagggagatcaggactatcgctttccaccgccagaa
aagcagagcacgggcttgttgaagacccctcctttggagatgcgtactgagcctgtgccc
gccagaccccctttactcgaacgacctccaagagcagtcgacggtcgagagggtagaaga
gaaaacatgtcaggagggttcagaacagaaagtcgctgggggccacccaggggggacttc
gatgagcgagacatgagggggatgtctgccggacctccgaagggtttccaggaggaccgc
tccaaccctaactttcagggtcgtttcgacggccgtggcggaaattcatcaggacctgct
tggaatcgtggaaccgggccttcttttaacgccaacatgcaccaggactacgacgatcgg
cgcagaccttgggaaaggcagaaggaccgagacgacagggacatggacttcaggggcgaa
atgaacggcaaccgtcatagccgagagcgagacagagaacgcgaaagggagagggacagg
aatcgggatcgcgaacgagccagagagcgcaatcgcgagagagaacgagagcgcgacagg
gagagggagaacgagaaggacaaagagcgggaacgctggactcccctttcttcgcaatct
cagcctcaaccgctgcttcctcaacccaaatctcagccgcttctcccacttccgaccccc
ctgctcgctcagcctcaagcacaggaacaagcgcaaaataatttgccgtctccgccgccg
gtgccggtgccccaacaccagcctcacacggaaccgaaaccagatgctgaactgcaaccg
gaagagaaaccagagtcactcagcccccctaaagagtcgccaagtactcaagagcaggag
gaagcttcgtttgtcaatggaacggaggcggattcaaaacctcaattagacatttcagag
cccgcgtcccagactgctacagagccctctcgtagcccctctccatccctcacctccgct
aacgagccctcgaaggaagagaagaccccagaaatgtgtgtttcctcacctgtggatgca
gacactaaacagactgggccaaaggtgaacgctgagactgaacctgagctagagaaaact
gacactgaggaaacataa
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