Chanodichthys erythropterus (predatory carp): 137007139
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Entry
137007139 CDS
T10334
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03013
Nucleocytoplasmic transport
cery03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137007139 (srrm1)
Spliceosome [BR:
cery03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
137007139 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137007139
NCBI-ProteinID:
XP_067224552
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Position
18:22168560..22181635
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AA seq
948 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLEKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFVFNQLEEKNPDGKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKIDEDKREKEIKERAQSKSPKRRKSRSPVKRDRKS
SPSRSPRRKPSPAASPPSSPPNNKEEPKQEPDQSESSKPEPLVQEASSTSDLVGEMKPDS
LTEAVKESSPDKTSKSEDRPKPRERDRDKDGRRDRPRHRSRSPRSRKRPRSRSRSFSPRR
RSPRRRISPRRRSPPRRRPPSRHRRSRSPVRSRRRSRSRSSSGSSSSRSPHKRAGKRRSV
TPPRKLPRRLDPASPSRRRGRSPSGPDTSPSAVKHRPGGRNDTPSPKPRRSDASESEEEK
VGKGSTADSVQQRRQYRRQNQQSSSDTGSSSSSEDEGPRRQNRGAGARNGEIRRRRSHSP
ASPRRRHRDASPRKRRSPSPAGRRHRSPSPVRRRRSPSPPPRRRSPSPPHRRFTPPIQRR
YSPSPPLAQKRRSSVSPPKRRRSPSPVSKHRGSPSPLSKRRGSPSPISKRRGSPSPLSKR
RGSPSPVSKRRGSPSPISKRRGSPSPMSKRRGSPSPMSKRRGSPSPMSKRRASPSPVAKR
RASPSPVAKRRGSPSPVGKRRGSPSPVAKRRSSRSPKRSRGSSPGKRGTSPSSVSPPPRH
RRSSPNPPAAQRGRDARSSPSAHATRVSSSPPARYGPSSLSPQRQRRQTSPSHSTRPIRR
VSRTPEPRKSQRGSQSPQPVRRQVSHSPSASPPPPPTAHKRTASVSPSRSASRSPPPPAK
KNSSVSPSPSPNKNSDAEGGKKKKKKKEKKHKKEKKHKKHKKQKKEKSGEEKSGGVAGGH
GQEAEPDSDQKKESESEVEDSLDDLEKHLREKALRSMRKAQMSPSSQS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggtttttccgcggcaccagtgcggagcaggataaccgcttcagcaacaaa
cataagaagctgttgaagcagctgaagtttgcagaatgtctggagaagaaggtggatatg
accaaggtcaacctggaagtcatcaagccctggatcacccagcgtgtgacggagatcctt
ggatttgaggatgatgtcgtcatcgaatttgtcttcaaccagctggaggaaaagaatcca
gatgggaagatgatgcagattaatttgacagggtttttgaatgggaagaacgctcgggaa
ttcatgaaggacctctggccgctgttgctaagtgcccaggagaacatcgccggtatcccg
tctgccttcctggagcaaaagaaagaggagatcaaacagagacagatcgaacaggagaaa
ctcgcctctctgaaaaaaatagatgaagataaaagggagaaggagatcaaagagcgagct
cagtcaaaaagccctaaaaggaggaagtcccgctcccctgtgaagcgtgaccgtaaatcc
agtccctctcgctctcctcgccgaaaaccgagcccggctgcctcgccgccttctagtccg
cccaataataaagaagaaccaaagcaagaaccggaccaatcagagagctccaaaccagag
ccacttgttcaggaggcttcctctaccagtgatctggtgggtgaaatgaagccagactcc
ttaacagaggctgtgaaagaatcctctccagacaaaacatccaaatcggaagacaggcct
aaacctagagaacgggacagagacaaggatggacggagagatcgcccacgccaccgctct
cgttctcctcgctctcgcaaaagacctcgatcccgctctaggtcgttctctcctcgccgc
agaagtcccaggaggcgaatctctccaagacgtaggagcccccctagacgtcgacctccc
tctaggcatagacgtagtcgttcacctgtccgcagcaggcggcgctctcgctcccggtcc
tcctcaggcagctcctcctctcggtcaccccataagagagcagggaaacgtaggtcagtt
acaccgcccagaaaacttccacggcgcttagaccccgccagcccctccagaagacgaggc
cgcagtccttcaggaccagacaccagcccttcagctgtgaagcacaggcctggtggaaga
aatgacacaccttctccaaaacctagacggtccgatgcatcagagtctgaagaggagaag
gtgggcaaagggtcaacggcagattctgtccagcagcgccgtcagtatcggagacagaat
cagcagtcctcttcagacactggctcatcctcttcttctgaagatgaaggtccaaggagg
cagaataggggggcaggtgccaggaatggagaaatcagaaggcggcgaagccattcacct
gcatcaccacggaggcgacacagagatgcatccccaagaaagagacgttctccatcacct
gctggccgtagacatcgatcaccctctcctgttcgccgccgcaggtcaccctctcctccc
ccgagacgcagatctccatctccacctcatcggcgtttcactcctcctatccagcgcaga
tacagtccctcccctcccctagctcaaaaaaggcgctcatcagtgtctcctcctaaacgt
agaaggtctccatcccctgtatccaaacatagagggtctccttcacctctgtccaagagg
agaggatcaccttcacccatttcaaaacgcagagggtctccttcacccttgtccaagagg
agaggatctccttcccccgtttcaaaacgcagagggtctccttcccccatttcaaaacgc
agagggtctccttcacccatgtccaaacgcagagggtctccttcacccatgtccaagcgt
agagggtctccttcacctatgtccaagcgcagggcgtctccctcgccagtggccaaacgc
agggcatctccctcgccagtggcgaagcgtagaggatccccctcccctgtggggaagcgt
agagggtcgccctcccctgtggccaaacgtcgctcctctcgatcccccaaacggagccgt
ggcagtagtccaggaaaaagaggtacttcaccctcgtcagtttcgcctccaccccgccac
cgtagaagctctccaaatccccctgcagcccaacggggcagagatgcccgctcctctccc
tctgcccatgctactcgagtgtcttccagtcctccagctcgatacgggccctcgagttta
tcaccacagagacaaagacgtcagacgtccccatctcacagcaccagacccattcgcagg
gtttcccgcacaccagaaccacgcaaatctcagagaggttctcagagcccccagcctgta
aggaggcaggtttcacattcaccatctgcttctcctcctcctcctcccacggctcacaag
cgaactgcttcagtctcaccctctcgttctgctagccgttctccacctccacctgccaaa
aagaacagcagtgtctccccgagcccatcacctaacaagaactcagatgcagaaggtggt
aaaaagaagaaaaagaagaaagagaagaaacacaagaaagagaaaaaacacaagaagcat
aagaaacagaagaaggagaagagtggagaagaaaagagtggaggggtggcaggaggacac
ggacaggaagcagagccagactctgaccagaaaaaggaatcagagagtgaagtagaagac
agtttggatgatctggagaagcacctacgtgagaaagctcttcgctcaatgaggaaggcc
cagatgtctccatcatctcagtcctga
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