Entry |
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Symbol |
rp1l1a
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Name |
(RefSeq) retinitis pigmentosa 1-like 1 protein
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KO |
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Organism |
cery Chanodichthys erythropterus (predatory carp)
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Brite |
KEGG Orthology (KO) [BR:cery00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:cery03037]
137007151 (rp1l1a)
04812 Cytoskeleton proteins [BR:cery04812]
137007151 (rp1l1a)
Cilium and associated proteins [BR:cery03037]
Primary cilia and associated proteins
Other primary cilia associated proteins
137007151 (rp1l1a)
Cytoskeleton proteins [BR:cery04812]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
137007151 (rp1l1a)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
18:complement(7425879..7436216)
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AA seq |
2514 aa
MPRAAPGSFDADTHFQNEQFPHPPTSSFGSSVKAASSAKRITFYKSGDTQFKGVKMAIHK
RSFKCFDALLDDLSQKVPLPFGVRTITTPRGTHSIKHLEQLEDGGCYLCSDRRYVKPINI
EAAGKRPAVWHHHSHPHNTRRKPSRPEEPPMGHQHHHRHPKRIVLVKNNDPAVRRSIVLS
RRTARSLRVFMDEISELMQCHVKKLYTLEGRKIDNIQSLMQCPSVLVCVGREPFRPLLME
SLKKLSDEKLPGMGTRSHSSICSEGHESKKNVNFGLETKKSIIHPRSDSSNRSTRFSLSS
EKSYQNGICMTPGQSGCVSSCPYVKELVVNDDIEKRVLVNKDGSLSVEMKVRFRLFNDET
LQWSTEIKKSATKVNNTGSIKDGDYLQAKAEYSDPDSISPSEETDEAFATKLHQKHLEET
LCQNCCNHCQEYDIWKNPMHKDPVACKSPSSSGSSHRVVRKKSSVDSTHTISRSSGEYTE
HVVEKASCFQQTMEEGDTRVEYCAVSRCCNRSEVSSAGITSKSQRSCEGEVFKVMEERPI
SAVSNSSNVLESLKEDQDDDYDDLPPSISRATDWSQSESDDQPKCAHCCGCQSSPRSYLS
PRPPSKESSSVVNSLKLKKYKTTFAAPVEPDGMSTTSPVSKVSSRSHPCHCGAITPSSAA
SGQQHRPEGRACSTISRHSQVSCKSRGKASNHGINASNALEICEGNAENRSLSPTSGVSR
RSGKSSVCSCNPEGNDPEKADSTLLKSNKSAASTSNAHENCEAVNNTLEVEATREHSESA
LSKNSNASSTSKISKRSNCSAHEMCSIGKSLKYEHNEAERVEERTKSATSAMSARSDFII
SEREPTPALVLTETDEAEEKSQERVVSPISMHSNLSTISRTSFKSKSEYSEKAKMPRSCS
PNDFKEVPSKLLNPQGDKSASAAAQNHTMSDNHCGQDTEFLQEVRSASAMSNKSNQFSEH
SSHTSEQTTRSVKSCCDLQDKATPKSSLFDIQCEPETEVTTGERLCSSLSNSSKTSVKSN
VSSKHSPTESKSTERVHSAMSIKTNASKGSCKSCKSNHNFSENTVTSVPNDVTPEECASP
KSESKRATSTMSQTSEKSNACSERSVKSSAKSPAFQKMDNGKDMIQNALTVTSPLPRTKR
SPSPRSNNDTEIKKTNSRATSGMSVSSNVSLQSQISSKCNCHCSSSCNLRETNPEKLKED
AKDESEESLSGKSKLSAKSLINNITSSGNQLDEPLSPTSTASVSLGLGEEHKGEDFDEQS
ISGISATTEDGGHKIKNVNGVDAEERPMTEMSVNSAISDSPRKSHHKNCKTPVQALSPVS
TASIMSAELKKRMSGSQLNENNIRVPSTLSLSSSRSKSPSRVSQRSAKNTVMKERDCEAV
NNTNHAEMTETSSKHDQSETASGKATPASDCLHSSETLQMSKNSQSTRESDKRSKCSSQC
LEINGLNIKYNRDNDGGMVKSLKTSTSERRSVKNYTSRPNSAVMSDISQNCRSLPQQMPN
KKKASDNHPDSSSDSVLSQALSAADLLRDIIDNARPVSRGSKSVTSSKNVDKVENKSQKS
SRSKHEEVNNSSDCNNKELVPSCLPNTSPIEVVNDWLRNIPIEGHVYEMDVELTEYMTLA
QGVDETSERDKGEEPESIIEVEEPCEDQAGENHIQQETNDSCGEKAQLETHEMDPNPEAL
TKQDSLQKQCHSSVQVMKVLLGPKLDRSTSLPEVSPVYGRRLSQSAQGLLDCLANLRLID
SDSKNEKHRKYNEIMMILQSLWLQKPSEDEQKKQNTKEHRSEDEFNPRSSSGVDVSGGST
GSVKGSMNGVVEKIETTQGTIPPIAEREASVQDKDEEENEEKSTTPAFECLDPSKVLSDP
VTPDIAEQVQGSPVNTQLDEDQENGILHKEDIQSSENMNDSDQTPQTTSYKSSGNESYTM
KSQENTSSGTPPSVQRAPLTKRVSQDPDPIWVLSLLKKLEKQFMLHYADAMAEFKVRWDL
DDNEMLDTMISELKEEVHKRIQLSINRELQKIQSRAGRGPRPPGNTLSRESTAQTEQRRK
RLRVMRNKSISMSRSDENYNASGTENSDQRSDDEYCPCDACMKKKMASRAVQQAQALSLA
PVMMEFDLRKILQMKKDPAKPLESKPEEQRTTNLTCGVDKEEKNLEVVHEEIEDTNNDTK
GHDVEMADQEEPDGALNAVDKGKNAHNIKDVSLDSEKRDPNEEETNDKRESGDVEGDEDE
EKEGEHVKEVVNGKTDTGGKEEVEFVEEETEKGDTEKDEEEKVSLKEDAENSDAAAKAEK
ENEMTETGEETESGDNGAETEIGEESTQDKSAEDGSESKSNKEYTPETTEDEKSDETPNE
ESASDKNADGNQDGSEEDNGTSDTGQDEDQPEGKANVPKVKIEVEVRGDTENETDKCSSV
EEDFENDKSDETIDDGCESTLPKQVTRTSMESQPGSVENCTNQTAQAKLKDLQSFMESVE
SQGDNMVVITKQPPYKEPHGPGNQKDMCNGLTEWQVSPKISNRTSIQKNTKDGQ |
NT seq |
7545 nt +upstreamnt +downstreamnt
atgccgagggcggccccaggctccttcgacgctgatacccattttcaaaatgaacagttt
cctcatcctccaacatcatcttttggctccagtgtgaaagcggccagctcagccaaaaga
attaccttctacaagagtggcgacactcagttcaaaggggtcaagatggccatccataaa
cgcagcttcaaatgctttgatgccttattggatgacctttcccaaaaggttcctctacct
tttggtgtgcgtactatcacgacccccaggggcacccacagcattaaacatttagagcag
ttagaggacggaggctgttacttgtgctctgatcgccgctacgtcaagccaatcaacata
gaagctgcagggaagaggccagcggtctggcaccaccacagccacccacataatactcgc
aggaagccctcccgacctgaggaaccccccatgggacatcagcaccaccatcggcacccc
aaaagaattgttctagtgaaaaacaatgaccctgctgttaggcgatccattgttctgagc
agacgaactgctcgaagtcttcgtgtcttcatggacgagatttcagaactcatgcagtgt
catgtcaagaaactctacactctggaaggacgcaagattgacaacattcagagtctgatg
cagtgccctagtgtgctggtctgtgtgggtcgagaacccttcagaccgctgctcatggaa
agcttaaagaagctctcagatgaaaagcttccaggaatgggcacaaggtctcactctagt
atctgcagtgaaggtcatgaaagcaaaaagaatgttaactttggcctggagacaaagaaa
agcattatccatccaagatctgactcgagtaatagatctacaagattctctctttcttca
gaaaagtcctatcagaatggaatatgtatgacaccaggacagtccggttgcgtcagctcc
tgtccttacgttaaagaactcgtagtgaatgatgacattgagaagagagtgcttgttaac
aaagatggcagcctttctgtggagatgaaggttcgctttcggctcttcaacgatgagact
ctccagtggtccaccgagatcaaaaagtcagccacaaaagtgaataacactggctccata
aaagacggtgattatcttcaagctaaagctgagtattcagacccagactccatctctcca
tctgaagagactgatgaagcctttgcaacaaagttgcatcagaagcatcttgaggagaca
ctttgtcagaactgttgcaaccactgccaagagtatgacatctggaaaaaccccatgcat
aaagacccggtggcctgcaaatcacccagttccagtggatcctctcacagagttgtacgc
aaaaagtcatcagtggatagtacgcacacaatttctcgctccagcggggagtacactgag
catgtggtggaaaaggcctcatgctttcagcagacaatggaggaaggggacaccagagta
gaatactgtgcagtaagtcgttgctgcaatcgaagtgaagtgtcatctgctggaatcacg
tcaaaaagccaaagatcttgtgagggtgaggtctttaaggtcatggaagagcgtccaatt
tctgcagtcagcaactcatccaatgtgcttgagtctttgaaggaagatcaggatgatgat
tatgatgacctgcctccaagcatctcgagagcaacagactggtctcaaagtgaaagtgat
gatcaacccaaatgtgctcattgttgtggctgccagtcttcaccaagatcttatttgtcc
cccagacctccaagtaaagaatcaagcagtgttgttaactcactgaagctgaaaaagtat
aaaaccacttttgcagcaccagtagagccagacgggatgagtacgacatctccagtttca
aaagtgtcctccaggtcccatccatgtcattgtggagccataaccccaagttcagctgca
tctggtcagcagcacaggcctgaggggagggcttgtagtacaatttctagacatagccaa
gtgtcttgtaaatctagaggcaaagcaagcaaccatggaatcaatgcatcaaatgctctg
gagatatgtgaaggtaatgctgaaaacagatctttaagtcccacgtcaggtgtgtcgaga
agatctggcaagtcttctgtatgttcatgcaatccagaggggaacgatccagagaaagct
gattccacattgttgaagtcaaacaaatctgctgcatccacttcaaatgctcatgaaaac
tgtgaagctgttaataatacattggaagtggaagccacacgggaacactctgagtctgca
ctgtctaaaaattcaaatgcctcttctacttcaaaaatctccaaaaggtccaactgctct
gctcatgaaatgtgttctattgggaaatcattgaaatatgaacataatgaagcagaaaga
gttgaagaaagaaccaaaagtgccacatcagcaatgtcagccaggtcagactttattatt
tcagagagagagcccacaccagccttggtcctgacagaaacagatgaagcagaagaaaaa
agccaagaaagagttgtcagcccaatttctatgcattcaaatttatcaactatatcgagg
acgtccttcaaatcaaaatctgaatattcagagaaagctaaaatgcctagatcttgtagt
ccaaatgatttcaaagaagtgccatcaaagttacttaatcctcagggtgataaatcagca
agtgctgctgctcaaaatcataccatgtcagataatcattgtggacaagacacagagttt
cttcaagaagtgagatcagctagtgccatgtctaataaatcaaatcaattttctgaacat
tcatcacatacatcagagcaaacaactaggtctgtcaaatcgtgttgcgacttacaagac
aaagccactccaaagtccagcctttttgatattcagtgtgagccggaaactgaagtaacc
acaggagaaagactatgcagttcactgtccaactcctcaaaaacttctgtaaagtcaaat
gtatcctcaaagcattcacccacagagtctaaatctacggaaagagttcacagtgcaatg
tctattaaaacaaatgcatctaaagggtcatgtaagtcctgtaaatcaaaccacaacttt
tcagaaaacacagttacctcagtaccaaatgatgtaacacctgaagaatgtgcaagtcca
aaaagcgagtcaaagagagctaccagcacaatgtctcagacctcagaaaagtctaatgcc
tgctctgaaagatctgtcaaatccagtgcaaagagccctgcattccagaaaatggacaat
ggcaaagacatgatacagaatgccttaactgtgacctctccattacctaggacaaagagg
tctccatctcctagatcaaacaatgacactgaaattaagaagactaatagcagagcaaca
agtgggatgtcagtaagctctaatgtatcattgcaatcccaaatatccagtaaatgtaat
tgtcactgctcctcaagttgtaatttgagagagacaaatcctgagaagctaaaagaggat
gccaaagatgaatctgaagaaagcttgtcaggaaaatcgaaactatcagctaaatctctt
atcaataacattacatcttcaggcaaccagttagatgagcctctaagcccgacatcgaca
gcatctgtttctcttggactaggagaagagcacaagggtgaagactttgatgaacaatca
atcagtggcatatctgccaccacagaggacggtggacataagataaagaatgtaaatgga
gtggatgctgaggaaaggccaatgacagaaatgtctgtgaactctgcaatttcagacagt
cccagaaagtcccatcacaagaactgcaagactcctgttcaagccctctcgcctgtctca
actgcaagcatcatgtcagcagaactgaagaagagaatgtcaggaagccagttaaatgaa
aacaacatcagagtgccctccactttgtcactgtcatcttcacgaagtaagtcaccctcc
agagtttcacagagaagtgctaaaaatacagttatgaaagagagagattgtgaagctgtc
aacaacaccaaccatgcagaaatgactgaaacgtcctcaaaacatgaccaaagtgaaaca
gcttctggaaaagctacaccagcaagtgactgtttacactcttcagaaactcttcaaatg
tctaaaaatagccaaagtactagagagagtgataaaagatctaaatgttcttcccaatgt
ttggaaataaatggactgaatataaaatataacagagacaatgatggggggatggttaag
tctcttaaaacatccacatcagaaagaagatctgtgaaaaattatacatccaggccgaat
tcagcagtaatgtctgatatttcccaaaattgtagaagtctaccacaacagatgccaaac
aagaaaaaagcatcagacaatcatcctgattcctcaagtgacagtgttttatctcaggca
ctttcagcagcagatttgttgagagatattattgataatgctagaccagtgagtagagga
tcaaagtcagttacctccagcaaaaatgttgacaaggtagaaaataaaagccaaaaaagc
agtaggagcaaacatgaggaagtcaacaactcatcagattgcaacaacaaggaactggtg
ccgtcatgcttaccgaacacttcccctatagaagttgtgaatgactggcttaggaacatt
cccattgaaggccatgtttatgaaatggatgtggaactcactgaatatatgaccctagct
caaggtgttgatgaaacttctgaaagggacaaaggtgaggaaccagaaagtataattgag
gtagaggaaccttgtgaggatcaagcaggcgagaatcatattcagcaggagaccaatgac
agttgcggtgaaaaagcacaattggaaactcatgaaatggatcctaaccctgaagcttta
accaaacaagacagtttacaaaagcagtgccattcttcggttcaggtcatgaaggtttta
ctgggtccaaaactagacagatccactagtttacctgaagtctcccctgtttatggcaga
agattaagtcagtctgctcaaggactgttggactgccttgcaaatttacgattgattgac
tcagactctaaaaatgaaaaacatcgtaaatataatgaaatcatgatgattctacagtct
ctctggctccaaaagccctctgaggatgaacagaaaaagcagaacacaaaggaacatcgg
tccgaggatgaatttaacccacggtcttcatctggggttgatgtaagcggtggctccact
ggctctgttaaaggtagcatgaatggcgtagtagaaaaaatagagacaactcaaggcaca
ataccaccaattgccgaacgagaagcctcagtgcaagataaagatgaagaagaaaatgag
gaaaagtctacaactcctgcatttgaatgtttagatccatccaaagttctctcagatcca
gttactccagacattgcagagcaagtacaggggagtccagtaaatacacaactagatgaa
gaccaagaaaatggcatattgcacaaagaagatattcaaagtagtgagaatatgaatgat
tcagatcaaacaccacaaacaacctcttataagagctctgggaatgagagttacacaatg
aaatctcaagaaaatacaagctcaggaactccaccgtctgttcagagagctccgcttacc
aaaagagtttcacaagacccagatcccatttgggtactgagcttattaaaaaagttagaa
aagcagttcatgttgcactatgcagatgccatggcagaattcaaagtgaggtgggatttg
gatgacaacgagatgctcgatacaatgatcagcgaactaaaagaggaagtacacaaacgg
attcagttaagtattaaccgtgaactgcaaaaaatccaaagtcgggctggtaggggtccg
agacctccgggaaatactctatcaagagagtctacggcccagactgagcagcgacgcaaa
cgtcttcgggtcatgcgcaataagtccatctccatgtcaaggagtgatgaaaattacaat
gcttcaggtacagaaaacagtgatcaacgcagtgatgatgaatactgcccatgtgatgca
tgcatgaaaaagaaaatggcatccagagcagtccagcaagctcaggctttgagtttggct
ccagttatgatggaatttgatctgcggaaaattttacaaatgaaaaaggatccagccaaa
cctctagaatcaaagccagaagaacaacgtacaaccaacttgacttgtggagtggataaa
gaagaaaaaaacttagaagtagttcatgaagagatagaagatacgaataacgatactaaa
ggccatgatgttgagatggcagatcaagaagagccagatggtgctcttaatgcagtagac
aaaggcaaaaatgcacacaacatcaaagatgtatctttagactctgagaaaagagatcca
aatgaagaggaaacaaatgacaaaagagagtctggtgatgtggaaggtgatgaagatgag
gagaaagaaggtgagcatgtgaaagaagttgtaaatggtaagacagacactggggggaaa
gaggaagtagagtttgttgaggaagaaactgagaaaggagatacagaaaaggatgaggag
gagaaagtcagtcttaaggaagatgcagaaaacagtgatgcagctgcaaaggcagaaaaa
gagaatgagatgacagaaactggtgaggaaaccgaatcaggtgacaacggagcagaaact
gagattggggaagagagtacacaagacaagtctgcagaagatggtagtgaatctaagtca
aataaagagtatacacctgaaactaccgaagatgaaaagtcagatgagacaccaaatgaa
gagtctgccagtgacaagaatgctgatggaaaccaagatggatctgaagaggacaatggg
acatcagacacaggacaggacgaggaccagcctgagggaaaagccaatgtgccaaaggta
aagatcgaggttgaggtcagaggagacacagaaaatgaaacggacaaatgtagctctgtt
gaggaagattttgagaatgataaatctgatgaaaccattgatgatggctgtgagagcaca
ctaccaaagcaggtaacaagaacatcaatggaatctcaaccaggatcagtggagaactgc
acaaatcagacagcgcaagctaaactgaaagatcttcagagtttcatggagagtgttgaa
agtcaaggagacaacatggttgtgattactaaacaaccaccatacaaagagccacatgga
ccaggaaaccaaaaggacatgtgcaatggcttgactgaatggcaagtgtctcctaaaata
agcaacaggaccagtatacaaaagaatacaaaggatggacaataa |