Chanodichthys erythropterus (predatory carp): 137007398
Help
Entry
137007398 CDS
T10334
Symbol
sox8a
Name
(RefSeq) transcription factor SOX-8a
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137007398 (sox8a)
Transcription factors [BR:
cery03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
137007398 (sox8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
137007398
NCBI-ProteinID:
XP_067224920
LinkDB
All DBs
Position
19:25081434..25087125
Genome browser
AA seq
406 aa
AA seq
DB search
MSKEPDKTSSGTESSFIGDADSDSPSSPSVSDEQGSQTGTGNRADSEEDARFPPCIRDAV
SQVLKGYDWSLVPMPMQGSRSLKDKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSK
TLGKLWRLLSESEKRPFVEEAERLRLQHKKDYPDYKYQPRRRKSLKPGQSELDAGAEKIH
HPSDQMYKTEAGMRGMHNQPVHGVQAHGPPTPPTTPKSDQHQSAKRATENTRQNIDFSNV
DISELSSDVIGSMGPFDVREFDQYLPLNGHAENNGGQHSSPGCFSASYHHHGSVSAWNKA
SGSPSTSSHNQSSQQRLLIKTEQLSPSHYGESHGSPTQSELSDCPDMQNSTYFTTFSGYP
AGIYQYPYFHSSRRSYVTPVLNSLSSPSHSPGANWEQPVYTTLTRP
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggagccggataaaactagttctgggacagaaagctcttttatcggcgatgca
gactctgattcaccgtcctctccatcagtgtccgacgaacaagggtcgcaaaccggcacc
ggcaaccgggcggacagcgaggaagacgcccgtttccccccgtgcatccgagatgccgtg
tcgcaggttctcaaaggctacgactggtccctggtgccgatgcctatgcagggtagcagg
tctttgaaagacaagcctcacgtcaagagacccatgaacgcgtttatggtgtgggcgcag
gctgcgcgcaggaagctggcggatcagtacccgcatctgcacaacgccgagctcagcaag
accctgggcaagttatggaggctgctctctgagagcgagaagaggccatttgtggaagag
gcagagagactgcgactccagcacaagaaagactatccggattataagtaccagccacgg
agacggaagagcctgaagccgggtcagagtgaactggacgcgggagctgagaagatccat
catccctcggatcaaatgtacaagacggaagcgggaatgagagggatgcacaatcaaccg
gtccatggtgttcaagcgcacggccctccgacgcctccgaccaccccgaagtctgatcag
catcaaagcgcgaagcgtgccacggaaaacacaagacagaacatcgactttagcaacgtg
gacatatcggagctcagcagcgacgtcatcggcagcatgggcccgttcgacgtgcgtgag
ttcgaccagtacctgccgttaaacggccacgccgagaacaacggcgggcagcactccagc
cccggctgtttcagcgcgtcctatcaccatcacggcagcgtttcggcatggaacaaggcg
tccgggtcaccgtccacatcctcgcataaccagtcgagccaacaaaggctgctcattaaa
acagaacaattgagtccttctcattacggagagtctcacgggtcgccgacccaatctgaa
ctgagtgactgtcctgacatgcagaactcgacgtacttcaccacattttctgggtatcct
gctggtatttatcaatatccgtacttccattcctccagaagatcatacgtgactcctgtt
ctcaacagtctgtccagtccatctcatagtcccggtgcaaactgggagcaaccggtttac
acgactttaacgcgcccctga
DBGET
integrated database retrieval system
