Chanodichthys erythropterus (predatory carp): 137007406
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Entry
137007406 CDS
T10334
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cery01002
]
137007406 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cery04121
]
137007406 (usp42)
Enzymes [BR:
cery01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
137007406 (usp42)
Peptidases and inhibitors [BR:
cery01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
137007406 (usp42)
Ubiquitin system [BR:
cery04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
137007406 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
137007406
NCBI-ProteinID:
XP_067224941
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All DBs
Position
19:20565968..20580171
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AA seq
1173 aa
AA seq
DB search
MTIVDKPPEKSDLESVRCKHSSSLTPFSSRDMESSSSSWSVSPSATELSRAKTACMAPTI
GATVNGSNNAALQVERPREQVMTSGDGIALPQKVLFPPERLCLKWNQGHRIGAGLHNLGN
TCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIS
VLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQATTFVHQIFGGYLR
SRVKCLNCKAVSDTFDPYLDVSLEIKTAQTLTKAFEQFVKPEQLDGDNAYKCSKCKKMVT
ASKRFTIHRSSNVLTVSLKRFTNFNGGKITKDVRYTEYLDLRPFMSQSQGEPQIYALYAV
LVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTVLNQQAYLLFYIRSPDVKNGS
DFSQMNHTPGQSSPRPSIPVKMNGPQYTSTSFIGPQLPPHMLKNSYINGNGSSKDYHGGS
KPNRSFCGVTKIGSGLSHASSSASASSSTSLVRPMGIPDSSKRPKLTFLIGQGKPVRPAQ
TQSSPNCSLSSASHPQPTSSSSSMSTSGFPQLKQVNGTHTGASFLVPYGQESSEESDQEA
GALENGSAKPYLAPDLSNGNGVKDDAQSHNSSSLPQLTSIKNGSNGFHVRENGSEPAHKS
QNGLPKANGFNHTDKVMGTSHSSSHISNASDSSELQFSLKCGNSESSSSKPPSTDDQPCS
SPSNKRMNPPLDSLSQSGAHVESAPPSNASLVSKIAETDLHGQTASKVESIQSHATNTAT
GMSDVQVNNSLSLQMGDGHTSPHRLKEVFRCNEAESKESKPSHLDKFGSGDGQRLSEDRN
NILERPQFSSTLKDRDRYRHHREYSERSRSRYGYSHRDSRPIRECSSSRDRHHRDREVER
HSDRFSHHRREHHHSQRRPREERNWSRDRRFVSESYRPSGYHNRDGYSSHSHRGVEGAHG
RTAHAVNSSKGRPSSSRSPSPLSGHCKRKRSPSVDARESSDECRVKKSKKKKRNKDKHRH
SEKDPSEVNEDSSSKRHKKKKKKKKRRREDEDRPHTGRDVALRREDRDSRGRNGSERGSQ
HHSSASLHSVHRHHMKDQQHLNGQKANGLSCYSGRELDMCHTGIDKDVKCKHFDHTTTVD
STKTLSNGNGDVDGVYHRTLSDVEEVTTLLKGN
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaacctccagagaagtctgacctggagtcagtgcggtgcaagcac
tccagctccctgacacctttctcttccagagacatggagagcagtagttcgagctggagt
gttagcccttctgccactgagctttcaagggccaagactgcctgtatggccccaactatt
ggagcgactgtgaacggtagtaataacgcagcactacaagtcgaaaggcccagagagcaa
gtgatgaccagtggggatggcattgctcttcctcaaaaggtcctgtttcccccagagcgg
ctttgcttgaaatggaaccagggccatcgcattggagcaggtctccataacttgggcaac
acatgtttcctgaactctaccctgcagtgtctgacctacaccgctccccttgccaactac
atgctgaccagagagcattccaaaacatgtcatgagcctgggttttgtatgatgtgtacc
atgcagaatcacatcatccaagtgttcgccaactctggaaacgtcattaagcccattagt
gtgcttaatgaactgaaacgaataggaaaacatttcagatttggaagccaagaagatgcc
catgagttcttgaggtacacagtggatgctatgcaaaagtcctgcctgcctggaaacaaa
ctggacaggcaaacacaagcaaccacttttgtacatcagatatttgggggttatctgaga
tccagagtgaaatgtttgaattgcaaagcagtctcagatacttttgacccttatctggat
gtttcactggagataaagaccgctcagacactaactaaggcatttgagcagtttgttaag
cctgagcaacttgatggggacaatgcttataaatgctccaaatgtaagaaaatggttact
gcatcaaagagatttaccattcatcgcagttctaatgttctcactgtctcactgaagcgg
tttaccaatttcaatggaggaaaaattacaaaggatgtgagatacacagagtacctagat
ttgcggccattcatgtctcagtctcaaggggagccacaaatctatgctctatatgctgtg
ctggttcattctggtttcagttgccacgctggacactactactgctacattaaggcaagc
aatgggcagtggtatcagatgaacgactcatcggtatctctcagcgatataagaacagtg
cttaatcagcaagcatacttactgttctacattaggtcacctgatgtgaaaaatggaagt
gacttcagccagatgaaccacactccaggccagtcatctccacgaccatccattccagtc
aagatgaatgggcctcagtacacctccacgtccttcattggtcctcagttgccacctcat
atgctgaagaactcatacataaatgggaatggttcttcaaaagattaccatggtggctcc
aaacccaacagaagtttctgtggtgtgaccaaaataggctctggcttatctcatgcatcc
tcttctgcatccgcatcctcttctacttcgcttgttcggcccatgggcattcctgactca
tccaagaggccaaagttgacgtttctcattggtcagggcaagcctgtgagacctgctcag
actcagtcaagccctaactgctctttatcttcagcctctcaccctcagcccacatcctct
agctcctcaatgtctacctcaggcttcccacagctcaagcaggtcaatggaactcacact
ggagcttctttcttggttccttatggtcaggaatcatctgaggaatccgaccaagaggct
ggagccttagagaatggatcagctaagccttatcttgctcccgatttaagcaatgggaat
ggggtaaaggatgatgcccaatcccacaattccagttcactgcctcagcttacctcaata
aaaaacggatctaatggctttcatgtgcgtgaaaatggatcagaacctgctcacaaatct
cagaatggccttcccaaagccaatggttttaatcatactgataaggttatgggcacttca
cattcttcatcccacatttctaatgcttctgatagttcagaactgcaattcagcttaaag
tgtggaaacagtgaatcatcaagctccaaaccgccaagtactgatgaccaaccatgctcc
tcaccttcaaacaaaaggatgaaccctcctttggactctttatctcagtctggtgcacat
gtagagtctgcacctccatctaacgcctcattggtctcaaagattgcagaaactgacctt
catggccagacagcttcaaaagttgagtcgattcagagtcatgccaccaatacagcgact
ggcatgtcagatgttcaggtcaacaacagtctcagcctccaaatgggtgatggccacaca
agtccacacaggttaaaggaggtgttcaggtgcaatgaagcggaaagcaaagagtcaaaa
ccatcacacttagacaagtttggctctggagatggacagaggctgagtgaggaccggaat
aacattttagagcggccacaattttcttcaaccctgaaggacagggaccggtacagacac
cacagggaatacagcgaaagaagccggagccgctatgggtacagccatcgagatagccgt
cccattagagagtgctcctccagtagagaccggcatcacagagatcgtgaggtagagaga
cactcggacagattctcacatcatcgtcgagagcaccaccactcccaaagaagacccaga
gaggaacgcaactggagtagagataggaggtttgtgagtgaatcttatcgtccttctgga
taccacaacagggatggatattccagtcacagccatcgtggggtggaaggtgcccatgga
agaacggcccatgcagtgaacagttcaaagggcagaccctcatcttcccgctctcccagc
ccactgtccggacattgcaagcggaaacggagtccgtcggttgatgcaagagaaagctca
gatgaatgccgagtgaagaaatctaaaaagaaaaagagaaacaaagacaaacacaggcac
tcagagaaggatccatcagaggtaaatgaggatagcagctccaagagacacaagaagaag
aagaaaaagaaaaagaggaggagggaggatgaggacaggcctcacacggggagagacgtc
gctctaaggcgggaagatcgcgattctagaggtaggaatggttcagaaagaggaagtcag
caccacagctctgcgtctcttcacagcgtccaccgacaccatatgaaggaccagcaacac
ctcaatggacaaaaagctaatggcctgagctgttacagtggacgtgaacttgatatgtgt
catactgggatagacaaagatgtgaaatgcaaacattttgatcacactaccactgttgac
agcacaaagacactctcaaatggaaatggagatgtagacggtgtctatcacaggaccctt
tcagatgttgaagaagtcacaaccttgttaaagggaaactga
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