Chanodichthys erythropterus (predatory carp): 137007479
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Entry
137007479 CDS
T10334
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03430
Mismatch repair
cery03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
137007479 (pms2)
03460 Fanconi anemia pathway
137007479 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cery03400
]
137007479 (pms2)
DNA repair and recombination proteins [BR:
cery03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
137007479 (pms2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
137007479
NCBI-ProteinID:
XP_067225079
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Position
19:complement(20549992..20556474)
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AA seq
854 aa
AA seq
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MSDSCPGSAGAIKAIDKQSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDSGT
ELVEVSDNGKGVEEQNFEGLTLKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSDLSVV
TCHESAQIGARLVYDHDGRLSQRVPHPRQPGTTITLQKLFSTLPVRHKEFHRNIKKEYSK
MIFVLQSYCIISTGVRITCTNQMGQGKRTTVLCTSGSNSMRDNIGAVFGPKQLQSLIPFQ
QISPNETIKEDYGLGGVDVPKDLFIIEGFVSQGDHGVGRSATDRQFFFINKRPCDPVKVS
KLVNEVYHMYNRHQYPFVALNITVASDCVDVNVTPDKRQILLQEEKLLLAILKSSLIAMF
ETGVNKISLNHISPAITSLCRPTETSVGLEDCETGSVSEALPDDGPPKTSINLAGLKEAF
SNHQAPGIGSKQSSHKAACAGPSQKKMFSFVSCSKKITDIMRPPLKSSPSFTDVTSNKST
ACLAKFKSTFDSDADDSGAANQSSAEDHKEILHENNSENKSDLHPIIHETDVKAETIDES
VDEKFWSHETLVPETKSEQNQDRMYSPEAKRARREDEPPAWSGLVDSKNKNASLQLDSPV
SIRKKTVLLQFSMQELSKRTQRLQAQVTENNDRELKYRRFRAKINPGENQSAEDELKKEI
SKDMFKDMEIIGQFNLGFIITKLKSDLFIIDQHATDEKYNFEMLQQNTVLKGQRLIVPQN
LHLPAISETVLMENLDIFRKNGFDFLIDEDAQVMERVKLVSLPTSKNWTFGPSDIEELIF
MLSDSPGIMCRPSRVRQMFASRACRKSVMVGTALNISEMKKLVLHMGEIEQPWNCPHGRP
TMRHLANLDMISHD
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattcgtgcccaggttctgctggagccattaaggcgatagacaaacagtctgtg
catcagatctgctctggacaggtggtgctgagtctggccacagctgtgaaagagttggtg
gagaacagtattgatgctggtgccacaaatgttgatgtcaagctaaaagatagtggaaca
gagttggtggaagtgtccgacaatggaaaaggtgttgaggagcaaaactttgaaggacta
actttaaaacatcacacctctaaattaagagatttttccgacctgatacatgtggagaca
tttgggttccgaggtgaagctctcagctcactttgtgctcttagtgatcttagtgtcgtg
acctgtcatgagagcgctcagatcggagctcggctggtgtatgaccacgatggtcgtctc
agtcagcgtgtgccacatccccgtcaacccggcactaccatcactcttcagaagctcttc
tccacattacctgttcgacacaaggagttccaccgcaacatcaaaaaggaatattccaag
atgattttcgtcttgcaatcctactgcatcatctccactggtgtgcgcattacatgcact
aaccagatgggacaaggcaaacgcaccacagtactgtgcacaagcggcagtaacagcatg
agagacaacattggagctgtgtttggacctaaacagctacaaagtttgattcctttccaa
caaatatctcccaatgaaacaattaaggaagactatggtctgggtggggtagatgttcca
aaagaccttttcatcattgaagggtttgtgtcacaaggggatcatggtgttggtcgaagt
gctactgacagacagttcttctttatcaataaaagaccctgtgatccagttaaggtctcc
aagcttgtgaatgaggtttatcacatgtacaatcggcatcaatacccttttgtcgctcta
aacatcactgtcgcttcagactgtgtcgacgtgaatgtcactccagataaacgtcaaatc
cttctacaggaggaaaaactcttgctggccattctgaaaagctcactcattgctatgttt
gagactggtgtcaataaaatcagtctcaatcacatttctccagcaattaccagcctgtgt
agaccaactgagacaagcgttggtttagaagattgtgaaacgggatcagtctctgaagct
cttccagatgatgggcccccaaagacttccatcaatcttgcaggacttaaagaagcattt
tcaaatcatcaggctccaggaattgggtcaaagcagtctagtcataaagctgcttgtgct
ggtccttctcagaagaagatgttttcctttgtgagctgctctaaaaaaattactgacatt
atgaggccgcctttaaaatcctctccaagtttcactgatgttacttccaataaatcgact
gcttgtctagctaaatttaaaagcacctttgatagtgatgctgatgattctggggctgca
aaccaaagttctgctgaagatcataaagagattctacatgaaaacaattcagaaaacaag
tcagatttacaccctattatacatgaaactgatgttaaagctgagactattgatgaatct
gtagatgagaagttctggagtcatgaaactttggtgccagagacaaagtcagaacaaaac
caggacagaatgtacagtcctgaagctaaaagagctagacgtgaagatgaacctccagca
tggagtggtttggtggactccaaaaacaagaatgcttccctgcagttggattcacctgtc
agcatacggaagaaaacggtgcttttgcagttttctatgcaggaactttctaaaaggacg
cagaggctgcaggctcaggtgacagagaacaatgatcgagagctaaaatatagacgattc
agggcaaagattaaccctggagaaaaccagagtgctgaagatgaacttaagaaagaaata
agcaaagatatgttcaaggatatggaaatcattggtcagtttaacctgggttttattatc
accaagctgaaatctgaccttttcataatagaccagcatgccacagatgaaaagtacaat
tttgagatgctacaacagaatacggtcttaaaggggcagcggctcatagttccacaaaat
ctccacctcccggctatcagtgaaacagtgctcatggaaaaccttgatatcttcagaaag
aatggatttgacttcctcattgatgaggatgctcaggttatggagagggtgaagctggtg
tctttacctacaagtaagaattggacctttggcccaagtgacattgaagaactcatcttc
atgcttagcgacagtccaggaatcatgtgtcgaccttctcgagtaaggcaaatgtttgca
tccagggcttgtcgcaaatcggtgatggttggcactgccctcaacatcagtgaaatgaag
aaactagtgcttcacatgggggaaattgaacagccctggaattgtccacatggtagaccc
accatgagacacctggctaatctggatatgatttctcatgactga
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