Chanodichthys erythropterus (predatory carp): 137007512
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Entry
137007512 CDS
T10334
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03430
Mismatch repair
Brite
DNA repair and recombination proteins [BR:
cery03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
137007512 (msh2)
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Gene cluster
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NCBI-GeneID:
137007512
NCBI-ProteinID:
XP_067225151
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Position
19:15876933..15890901
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AA seq
936 aa
AA seq
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MAVQPKQNLSMDSASEHGFLNFYFSMPEKPDTTVRVFDRNDYYTVHGKDAVFAAKEVFKT
NGVIKNLGTGNKRLESVVLSKMNFESFVRDLLLVRQYRVEVYKNASKSSKDHDWQISFKA
SPGNLTQFEEILFGSGGGPGEGAAGVVGVRLGTGADGQRVVGVGYVDSTLRKLGVCEFPD
NDQFSNLEALLVQIGPKECVLPGGDAGGDLGKLKQVVQRGGILLTDRKKSEFTTKDIVQD
LNRLLKARKGETVSSAALPEMEKQIAMSCLEAVIKYLELLSDEANFGSFKMTTFDLNQYM
RLDNAAVQALNLFQGSSDDATGTHSLAGLLNKCRTPQGQRLVNQWIKQPLIDKNKIEERL
DLVETFVEDSELRKSCQEDLLRRFPDLNRMAKKFQRQSSTLQDCYRVYQAVGQLPNLVLA
LERYCGKHQVLLHAAFISPLNDLVSDFSKFQEMIETTLDMNQIEHHEFLVKPSFDPTLSE
LRENMDRLEKAMQAALSSAARELGLEAAKTVKLESNAQIGYFFRVTCKEEKSLRNNKKFT
TLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNEVIA
QLDAVVSFAVVSHAAPVPYIRPKILEKGSGRLFVKAARHPCVEAQDDVAFIPNDVTFTRG
EEMFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQIK
GVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFCLF
ATHFHELTALAQQVPTVRNLHVTALTTDSTLTMLYKVKKGVCDQSFGIHVAELANFPKHV
IANAREKALELEEFQDISKAGEEAGPEAKKRCLEKQEGEKIIEAFLAKVKSMPVDGMSDE
AVKKELRKLKAEVIGQNNSFVNEIVSRSSKGKLTSA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaacctaaacaaaatctgtctatggacagtgcatctgaacatggattcttg
aatttttatttttctatgcctgagaaacctgacaccacagtgagagtttttgatcgaaac
gattactatacggtacacggaaaagatgcggtttttgcagccaaggaggttttcaagacg
aacggagtcatcaaaaacctgggcacaggaaacaagaggttggagagtgtggttctcagt
aagatgaactttgagtcatttgtgagggacctgctgctggtcaggcagtaccgggtggag
gtgtacaagaatgccagtaagagtagcaaagatcatgactggcagatatctttcaaggct
tctccaggaaacctgacccagtttgaggagattttgtttggcagtggaggaggacctggg
gagggtgcagctggtgtcgtcggggttcgtcttggcacgggggctgacggacagcgtgtt
gtcggtgttggctatgtagacagcacgctcaggaaactcggtgtgtgtgaattcccagac
aatgatcagttttccaatctggaggctcttcttgtgcagatcggtcccaaagagtgtgtg
cttcctggaggagatgcaggtggagaccttgggaaactcaaacaggtggtacagcggggt
ggcattctgctcacagacaggaagaaatctgagttcacaaccaaagacattgtgcaggat
ctgaatcgcctactgaaggcccgcaagggagagacggtgtccagtgctgcccttccagaa
atggagaaacagattgcaatgtcttgcttagaagcagtcatcaaatacctggagctcctc
tcagatgaggccaattttggatccttcaagatgaccacatttgacctcaaccagtacatg
cgtctggataatgctgctgtacaggccctaaatctcttccagggttcctctgatgatgct
acaggcacacactccctggcaggccttttaaacaaatgtcgtaccccacaaggacagcgg
ttggtcaaccagtggatcaaacagcctctcattgacaaaaataagatagaagaaagactg
gaccttgtggagacttttgtggaagactctgagctgaggaaaagttgtcaagaggatctt
ctccgccgttttccagacctgaaccggatggcaaagaagttccagcgtcagagctctact
ttacaggactgttatcgggtctatcaagctgtcgggcaactgccgaatctggtgctggca
ttggagagatactgtgggaaacatcaggtcctcctgcacgcagcattcatctctcccctt
aacgaccttgtctctgacttctctaaatttcaggagatgattgaaaccacactggacatg
aaccagattgagcatcatgagttcctagtaaaaccctcatttgatcccacattgagcgag
ctcagggagaacatggatcgtttggagaaagccatgcaggccgccttgagcagtgcggct
cgtgagcttgggttggaagcagccaagactgtgaagcttgaatccaatgcacagatcggt
tactttttccgagtcacgtgcaaagaagaaaagagccttcgcaacaacaagaaattcaca
actttagatgttcagaagaatggagtgcgattcactaacagtaagctgagctctttgaat
gaagagtacactaaaagcagagaagagtatgaagaggctcagaacgccatcgtcaaagag
atcatcagcatagccgctggctatgtggatccagtacagactctaaatgaggtgatagct
cagctggatgcagtggtaagctttgctgtggtgtcccatgctgccccagtgccttacatt
aggccgaaaatactagagaaaggatcagggagactctttgtgaaagcagcaagacatccc
tgtgttgaagcccaagatgatgtggcttttattcccaatgatgtcaccttcacaaggggg
gaggagatgtttcatatcatcacaggtccaaatatgggtggtaaatctacatacatccgt
caggtgggtgtgatcgtgctgatggcacagattggctgttttgtgccatgtgatgaggca
gagctgagtgtggtggactgtgtgctcgctcgagtgggtgcgggggacagccaaatcaaa
ggagtgtccacctttatggctgagatgctggagacggctgctattcttcgatcagccaca
gaggattctctcatcattattgatgaactgggcagaggcacatctacatatgatggcttt
ggtctggcctgggcaatctcagagtacatcgcgacccgcctcaagtccttctgcctgttt
gccactcacttccatgagctgactgcactggcgcagcaggtacccactgtccgtaacctc
cacgtcactgccctgaccacagatagcactctcacaatgctctacaaggtgaaaaaaggc
gtgtgtgaccagagctttgggattcatgtggcagagcttgctaacttccccaagcatgtg
attgctaatgcacgggagaaggctttggagcttgaggagttccaggatatttccaaagct
ggggaggaagctggacctgaagccaagaaacgctgcctggagaaacaggagggggagaag
atcatcgaggctttcttggctaaggttaaatcaatgcctgttgacggcatgtctgacgag
gctgtcaaaaaggagctgcgcaaactcaaagcagaggtcatcggccaaaacaatagcttc
gtcaatgagatagtgtcacgttcttccaaaggcaaactgacttcagcctga
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