Chanodichthys erythropterus (predatory carp): 137007687
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Entry
137007687 CDS
T10334
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
137007687 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cery01009
]
137007687 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cery04515
]
137007687 (pcdh11)
Protein phosphatases and associated proteins [BR:
cery01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137007687 (pcdh11)
Cell adhesion molecules [BR:
cery04515
]
Cadherins
Protocadherins
137007687 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
TMEM154
DUF6249
Prominin
Motif
Other DBs
NCBI-GeneID:
137007687
NCBI-ProteinID:
XP_067225441
LinkDB
All DBs
Position
1:complement(5686995..5887769)
Genome browser
AA seq
1036 aa
AA seq
DB search
MDLASEAHVLVVLLTCLFLICRAQEKDYTVKEEQPENVRIGNLRKDLNLNLDPDVKLSSA
LQFKPVYKTGDVPLVKVEASTGEIFTTANRIDREKLCSGVFNEKRCFYEIEVAVLPDEIF
RLVKIRFLIEDINDNAPLFQSTVINISIPENTAINSRYPVPSAFDPDIGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQSLDRETKDTFVMKIKVEDGGTPPKSSTAILQVTVS
DVNDNRPVFKDSEVEVNVPENAPMGTSVTHLHATDADLGSNAQIHFSFSNQISPATKRHF
AIDSTTGLITVKQPLDREVNPVHKLIVLASDGSSTPSRATVIVNVTDINDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQPEIQLSIPENND
PGTQLIKISATDADSGSNALIIYSLGADAPDGFNIDPRSGILSVVKRLDREKQEKYSFTV
IARDNGSTPLQSNVTVKLIVQDQNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNAVVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDAGQMQTTSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVPSTTSPGSVVTRVFAIDNDTGMNAELQYSIIGGSP
RGLFAIDKTTGNITLQEKIIAADQGLHRLVVKVKDLGQPESLHAIALVHLFVNDTVSNAT
FIQEQLRKSLETPLERNIGENDVTPQTNGYVIVVIAIIAGTMTVILVIFVTALVRCRQTP
RHKVVQKSKQSGEWVSPNQEGRQIKKKKKKKKRSPKSLLLNFVTIEEPKSDDPTHEHING
TLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVAPKKHHV
IQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGSFKAPGQIHTRQETALKPPLYGT
LCGTGTARSHRIKINL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggacttggcaagtgaggcccatgttctggtggttttactcacctgcttattcttgata
tgccgggctcaagagaaggactacacagtaaaagaggagcagccggagaatgtgcgaatc
ggaaacctccgcaaagacctaaacttgaacctagatccagacgttaaactgtcttcagcg
ctgcagttcaaacctgtctacaagacaggtgatgtgcctttggtcaaggtagaagccagc
acgggagagattttcaccacagccaaccgcatcgaccgcgagaaactctgctccggagtc
ttcaatgagaaacgctgcttttacgagatcgaggttgccgtgctacccgacgagattttc
cgactggtcaagatacgcttcctcatcgaagacatcaacgacaacgccccactcttccag
tcgacggttatcaacatctccattccagaaaacaccgccatcaacagtcgctaccctgtc
ccctctgcatttgaccctgatataggaatcaatgggattcaacactacgagcttgtcaag
agtgtcagcgaatttggcctggacatcattgagacacctgaaggagacaaatggccccaa
ctcatagttcagcagagcctcgatcgggagacgaaggacacctttgtgatgaaaattaaa
gtagaggacggtggcacccctccaaagtccagcacagccattctgcaggtgaccgtctca
gatgtgaatgacaatcggccggtgttcaaggacagcgaggtggaggtaaacgttcctgag
aatgccccaatgggaacatctgtcactcaccttcatgccacagatgctgatctggggtcc
aatgctcagattcacttctccttcagcaaccaaatctcccctgccaccaaacgacatttt
gctattgacagcacaactggactgattaccgtcaagcagccattggacagggaagtcaac
ccagtgcacaagctcatagtgctggccagtgacggaagctctacgccttcaagggctaca
gtgatagtcaatgtaacagacattaatgacaacgtcccctctatagatacccgttatata
attaatctagttaatggcactgtgctgttgtctgaaaatgccccccttaacacaaaaata
gctttaattacggtgacagacagagatgcggacctgaacggtaaagtgacttgttatact
gatcatgatgtacctttcagattgaagccagtcttcaatgaccagtttttgctcgaaact
gccgcacccttagattatgagaccactcgagagtatgcgattagaatagtcgcatcggac
tcggggaaacctcctttgaacacttcagcaatggttctgattaaaatcaaggatgagaat
gacaatgtcccagttttccctcagcctgaaatccagctgtccattccggaaaacaatgac
cccggcacacagttgataaaaatcagtgcgacagatgcagatagtggttctaatgccctt
attatttatagtcttggtgcagatgctcctgatgggtttaacatagatccccggtctggt
atcctttccgttgtcaaaaggctggatagagagaagcaggagaagtattcatttacggtc
attgccagggataatggttctacccctcttcaaagcaacgtcaccgtaaagctaatagtc
caagaccaaaatgacaacagtccagcctttacccatcccgagtacaacttctatgtgcct
gagaacctgcctttgtatgggacagtcggtttgatcactgtcacggatgcagatgctggc
gacaatgcggtcgtcaccctctcaatcataaacggaaaggacaatttcatcatcgaccca
aaaaccggggtgatcaaaccaaacattaccttcgacagggagcaacaaagttcctacaca
tttgttgtcaaggctgtggacgcaggtcaaatgcaaaccacctcatatgccaaggttacc
ataaacgttgttgatgtgaatgacaatcgaccggtgtttgtcatcccctcctcgaactac
tcctatgatctagtaccttcaaccaccagccctggatctgtggtgaccagagtgtttgcc
attgacaatgacaccgggatgaacgcagagctgcagtatagtattattggagggtcgccg
agaggattgtttgccattgacaaaacgacaggcaacattactctgcaggagaagattata
gcggcagaccaaggtctccacaggctggtggtaaaggttaaggatttgggacagcctgag
tccttgcatgcaatcgcccttgttcatttgtttgtgaatgatactgtctctaatgccacg
ttcatccaggagcaactacgcaagagtttggagacgcccttggagcggaacattggggaa
aacgatgtgacaccccagaccaatggctacgtaattgttgttattgccataattgctggg
actatgactgttatcttggtgatctttgtgactgctttggtacgctgtcgacagacaccg
agacacaaagttgtccaaaagagcaagcagagtggtgagtgggtatcaccaaaccaggaa
ggtcggcagattaaaaagaaaaagaagaagaagaagaggtctccaaaaagtttgctattg
aattttgtaaccatcgaggaacccaagtctgatgaccctactcatgagcacatcaatggc
accttagacctccctgttgaactcgaggagcagacaatgggaaagtacaactgggctacc
acaccgactaccttcaaacctgacagtcctgacttagccaagcactacaaatccgcttcc
cctcagccaacattccagatcaaaccagagacccctgtggctcccaagaagcatcatgtc
atccaggaactcccactggacaacacattcgtggtgggctgtgactcactctccaaatgt
tcctccagcagctccgacccctacagcgtttcagagtgcagctgtcaagggagcttcaag
gcacctggacaaatccacaccagacaggagacggcactgaaaccaccactctatggcaca
ctctgtggcacaggtacagctcgctcccacaggataaaaatcaatctctag
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