Chanodichthys erythropterus (predatory carp): 137007921
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Entry
137007921 CDS
T10334
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cery03016
]
137007921 (trub1)
Enzymes [BR:
cery01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
137007921 (trub1)
Transfer RNA biogenesis [BR:
cery03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
137007921 (trub1)
Prokaryotic type
137007921 (trub1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
137007921
NCBI-ProteinID:
XP_067225732
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Position
19:complement(12005920..12009481)
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AA seq
291 aa
AA seq
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MAGVSTVQNGSLSKLQSLHGIFAIYKKQGPTSADVLNSLKKALLKEAGVANPNPRKRKKQ
PLKIGHGGTLDSNASGVLVVGIGEGTKMLTTMLAGSKKYRAVGELGKATDSLDVTGNVVE
EKSYDHITKEAFEEKLKQFTGEIMQVPPLYSALKKDGKRMSVLLKQGQEVEAKPARPVTV
YSLSLQDFSPPLFTIDVECGGGFYVRSLVDDLAKGLSSCAHVKELIRTKQGQFTLEEHAL
KEECWTLTDISQALQPCPEPSGQQKYAKNSKSMHKSGSSQSKGDDGDHNSD
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgtctcaactgtacagaacggttcattatccaaactgcagtctctgcatggt
atatttgccatttataagaaacagggtcccacctcagctgacgtgttaaactcactgaag
aaggcgcttttaaaagaggcaggtgtcgcaaatcccaaccctcggaaaaggaagaagcaa
cctttaaaaattggtcatggcggcaccctggacagcaatgcttctggtgtacttgtggtt
ggaattggtgaaggaacgaagatgctcaccacaatgcttgcaggatcaaagaaatacaga
gctgtcggagagttaggcaaagcaactgacagtcttgacgtcactggaaatgttgttgaa
gagaaaagttacgatcacatcacaaaagaggcttttgaggagaagcttaagcagtttact
ggtgaaattatgcaggttccacctctatattcagcactgaagaaggatggcaagcgcatg
tctgttcttctcaagcaaggtcaagaggttgaggctaaacctgcacgtccagttacagtg
tacagtctctctttacaagacttcagccctccactttttaccatagatgttgagtgtgga
ggcgggttttatgtcagaagtctggttgatgatctagccaaaggtctgtcgtcctgtgct
catgtcaaggaactgatccggacgaagcagggtcagttcacattggaagaacacgcattg
aaagaagaatgttggacattgacagacatatcacaggctctgcagccctgcccagagcca
tcagggcaacaaaagtatgccaagaattcaaaatcaatgcataaatctggctcatctcaa
tctaagggtgatgatggagatcacaacagtgactaa
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