Chanodichthys erythropterus (predatory carp): 137008015
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Entry
137008015 CDS
T10334
Symbol
drosha
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
137008015 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137008015 (drosha)
03009 Ribosome biogenesis [BR:
cery03009
]
137008015 (drosha)
03036 Chromosome and associated proteins [BR:
cery03036
]
137008015 (drosha)
Enzymes [BR:
cery01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
137008015 (drosha)
Messenger RNA biogenesis [BR:
cery03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
137008015 (drosha)
Ribosome biogenesis [BR:
cery03009
]
Eukaryotic type
90S particles
RNase
137008015 (drosha)
Prokaryotic type
rRNA processing factors
137008015 (drosha)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
137008015 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
137008015
NCBI-ProteinID:
XP_067225892
LinkDB
All DBs
Position
19:33100636..33151494
Genome browser
AA seq
1289 aa
AA seq
DB search
MSFHAGRGCPRGRPAAPGPMYRPTPPRYHYDPPAPPGPIYNPQGGSGYMPPHPDFMPFHF
PPPSQGSNVLPQCPLRPPAFPEPPPFPPPAPHSSDGSAPIPVQSSYPYMMPTVPPPPLPP
VPPSVPPSMPYSPSYPMSYPPQPQLPPPPSFNPAYVQPGGSYKPERPRQNTLQYKTDSCS
RSPERLRHHDDHRHRGHSYGGYGSRHNREFGGEKRDRGSSSERRRSDSPRCKTDYDRGRV
PSRHRSRERYRHRDEPSSPPSDRHRKHIHSRSGSRERKRRRVEEEKERKTDGASSSRERA
VNLSRSRDPEEMSTDRHEEEKGEEELLKPAWIRCTHAENYYSNDPMDQVGDSTVVGTSKL
RDLYERFEEELGRRQERAKSSRPKWEPPKTKLDQDQEESSSESECESDGGGSSCSSSSDS
EVFDVIAEIKRKKAHPDRLHEELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEQPVK
ECRPMSNNAGKLFHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSCFSHTPLTNIPLCR
VIRFNIDYTIHFIEEMSPENYCIKGLELFSSYLFKDILELYDWNLTGPEENGPSGCQRFH
FMPRFVRFLPDGGKEVLSMHQVLLYLLRSSTPLVPEEEIANMLQWEELEWQKYAEECKGM
IVTNPGMKPSSVRIDQLDREQFNSSVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKL
RHLLANSPKVKQIDKQKLTQREATLQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHA
MMLPVLTHHIRYHQCLMHLDKLIGYMFKERCLLQLAMTHPSHHLNFGMNPDHARNSLSNC
GIRQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAVVEFLT
SVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAM
ANCFEALIGAVYLEGGLEEAKQLFGRLLFNSEDLREVWLNYPPHPLQVQEPLTDRQLIES
SPVLQKLTNFEDAIGVLFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATE
YLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADL
LESFIAALYIDKDLEFVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPD
IPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQ
KRFIERKYRQELKEMRRERERQERDSDEG
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccatgctggccgcggatgcccgaggggaaggccagccgctccaggtccaatg
taccggcccactccgccgcggtatcactacgaccctcctgctcctcccggtcctatctat
aaccctcagggtggcagtggatacatgccgcctcaccctgacttcatgcctttccacttc
cctccaccttcacagggttctaatgttctgccccaatgccccttacgcccaccggccttc
ccagagccgcccccttttcctccacctgctcctcacagctcagatggctcggctcccatc
ccggttcagagctcttacccctacatgatgcccacggtcccccccccaccattgccacct
gtgcccccctcagtgccaccctccatgccctattcgccatcatatcccatgagctaccct
ccacagccccagctcccccctccacccagtttcaacccagcttatgtgcagcccggaggt
tcctacaaacccgaacgcccccgccagaacactctgcaatacaagacggactcatgttcc
cgctcacccgagagactccgtcaccatgacgaccaccggcacaggggccacagctacgga
ggatatggaagccgacataaccgtgagtttggaggagagaaacgggacagagggagcagt
tcagagcgcaggcggtcagacagccctcggtgtaaaacggactacgatagaggacgcgtg
ccatcaagacaccgcagcagagaacgatatcggcatagagacgagccaagttcacccccc
tcagacagacacaggaaacacattcacagtcgctcaggcagtcgagagagaaaacgccgc
cgtgtggaggaagagaaagagaggaaaacagatggagcctcgagcagtcgagagagagct
gtgaacttaagcaggagtagagatccagaggaaatgtccactgaccgtcacgaggaggag
aaaggcgaggaagagttactcaaacctgcctggatccgctgcacgcatgctgagaattac
tactccaacgacccaatggaccaagtgggtgactctacagttgtgggaacaagtaagttg
agagatctgtatgagcgctttgaggaagaacttgggcggaggcaggagcgggccaaatcc
agcaggcctaaatgggaaccacccaagaccaaactggaccaggatcaggaagagagctcc
agcgaatcagagtgtgagtctgatggaggtggtagcagctgctccagtagctctgactct
gaggtgtttgatgtcatcgctgagatcaagaggaagaaagctcaccctgaccgcctccat
gaggagctgtggtacaatgaccccggacagatgaatgatggaccattatgcaagtgcagt
gccaaagccagacgaactggaattcgacacagtatttaccctggcgaacagccggtgaaa
gagtgtcggccgatgagtaacaatgccggcaagctgttccactacagaataaccgtttcc
ccacctaccaacttcctgacagatagacccacagttattgagtatgatgatcatgagtac
ctgtttgagggcttttcctgcttttcacacacaccacttactaatatccctttgtgtcgg
gttattcgcttcaacatcgattacaccatccactttatagaagagatgtcacctgagaac
tactgcattaaaggcctggagctgttttcctcgtacctctttaaagacatcttggagttg
tatgattggaacctcactggtcctgaagaaaatggcccctcaggttgtcagaggtttcat
ttcatgccacggtttgttcggttcctcccggatggaggaaaggaggtgttgtcaatgcac
caggtgctgctgtatctgctgcgcagcagcacgcctctggttcccgaagaggagattgca
aatatgctacagtgggaggagctggagtggcagaaatatgctgaagagtgcaagggcatg
attgtcaccaaccctggcatgaaacccagctctgtgaggattgaccagttagaccgcgag
cagttcaactccagtgtcatcactttccccatcattgtgcattttggtatccgacccgct
cagcttagctatgccggagacccacagtatcaaaagttgtggaagagttacgtgaaattg
cggcatctgctggccaacagcccgaaggttaaacaaattgacaaacagaagttaacgcaa
agggaggcaacgctgcagaagatcaggcagaagaatacgatgagaagagaggtcacagtg
gagctcagcagtcagggtttctggaagactgggatccgctctgatgtctgccagcatgcc
atgatgctgccagttctcacccaccacatccgctaccaccagtgcctgatgcatttggac
aagctgatcggttacatgttcaaggaacgatgcctactgcagttggcaatgactcacccc
agtcatcaccttaattttgggatgaatcctgaccatgctcgcaactctctatccaactgc
ggcatacgccagcccaaatatggagaccggaaagtgcatcatatgtacatgaggaaaaaa
ggaattaacaccttaatcaacattatgtctcggttgggccaggatgacccatcaccctcc
agaatcaatcataatgagcgcttggagtttcttggtgatgcagttgttgagttcctgacc
agtgtgcatctctactacctgttcccaagtctggaggagggaggactcgccacatatcgc
acagcaattgttcagaatcagcatctggctatgcttgctaagaaattggagttggatcgg
ttcatgttatatgctcacggccctgacctgtgcagagaatcagacctccgacacgccatg
gcaaactgttttgaagcgctaataggggccgtttacctagaaggtggattagaggaagca
aagcaactctttgggagactgctgttcaacagtgaggacctgagggaagtttggctcaac
tacccacctcatcctttacaggtgcaggagccactgacagacaggcagttgatcgagtca
tctccagttctacagaaactcactaattttgaagatgctattggagtgctcttcactcat
gtccgtctcctcgcacgggccttcactctgagaacagtgggcttcaaccacctcacccta
ggccacaaccagaggatggagttcctgggagattctattatgcagctggtggcaactgaa
tatctcttcatccacttcccagaccatcatgaaggacatttgacactcctgcgcagctct
ttggtgaataaccggactcaggcaaaggttgcagaggaactgggcatgcaggaatatgcc
atcaccaacgataagaccaaacggcctgttgccctgcggaccaagactttagccgatcta
ctggagtcattcattgcagctctttacatagataaagacctggagtttgtgcacacattt
atgaatgtttgcttcttcccacgactcaaggaattcatcttgaaccaggactggaatgat
ccaaaatcgcagctgcagcagtgttgtttaacattgcggacagagggcaaagagccagac
attcctctatacaaaacacttcagacagttggaccctctcatgccaggacctacacagtg
gcagtgtattttaaaggtgaacgtattggctgtggaaaaggaccaagcattcaacaagcc
gagatgggtgcagccatggatgccctggagaaatataattttcctcagatggctcatcag
aagcgattcatcgaaaggaagtaccggcaagaactgaaggagatgagacgagagcgagag
cgtcaggagagagatagtgatgaagggtag
DBGET
integrated database retrieval system
