Chanodichthys erythropterus (predatory carp): 137008700
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Entry
137008700 CDS
T10334
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137008700 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137008700 (hbs1l)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
137008700 (hbs1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
DO-GTPase2
Aq_aa27
Motif
Other DBs
NCBI-GeneID:
137008700
NCBI-ProteinID:
XP_067226494
LinkDB
All DBs
Position
20
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AA seq
708 aa
AA seq
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MSRHRNVRGYNYDEDFDDDDVYGQSVEDDYCISPATAAQFIYSRQDSRQARHVETVEEEV
YEEEEEEMPTSPIITSTLDPLQQGQLYSCLDQMRAVLGDSISDSTLTQAALKYDCDPHRA
LDFILTEENTNTHAPPARTNTLPEPTTTAAPQKGALFSPSHDSIKTVSSAHSCKPLKQDA
KVRDAPESRVEAEVVPKVARMTVSGKKQTMGFDVRSAEENGVVPSVRRGPSPEVTAAPTT
ETPSKPGAASEDSNAPTPSRPAGKSKQQLNIRAELEKRQGGKPLLNLVVIGHVDAGKSTL
MGHLLYLLGNVNKRTMHKYEQEAKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETD
SKVVTLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHGLLVRSL
GVTQLAVAVNKMDQVNWQQERFQEIVSKLGHFLKQAGFKDSDVYYIPTSGLSGENLTARS
KVAELTAWYTGPCLLEQIDAFKPPQRSVEKPFRLCVSDVFKDQGSGFCVTGKVEAGFIQT
GDKLLAMPPNETCTVKGITLHDEALDWAAAGDHVSLTVTGMDIIKINIGCIFCDPKEPIR
ACTRFRAKILLFNIEVPITKGFPVLLHYQTISEPATIRKLVSILHKSSGEVLKKKPKCLS
KGQNAVVEIQTQRPVALELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccacaggaatgtccgaggttataactacgacgaagactttgacgatgatgac
gtgtacgggcagtcagtggaggatgactactgcatctctcctgccactgccgcacagttt
atctattcacgtcaagactcaaggcaggctcgacatgtagagaccgtggaggaggaagta
tatgaggaggaggaagaggagatgccaacctctccaatcatcacaagcacactagaccca
ctacagcaaggtcagttgtattcctgtttggatcagatgcgagcagtactgggagactca
atttcagactccacactgactcaggcagctcttaaatacgactgtgaccctcaccgggcc
cttgatttcattctaactgaggagaacaccaatacacacgcccctccagcccgaaccaac
acactgcccgagcctaccaccacagctgcaccgcagaaaggagccttattttctccctca
cacgatagtattaagactgtatcaagtgcacattcatgcaaacccctgaaacaagacgca
aaagtacgggacgctccagagagtcgtgtcgaagcggaggtcgtccctaaggttgcccgg
atgactgtgtcaggcaagaagcagaccatgggctttgatgtgcgaagtgcggaagaaaat
ggcgttgtcccatcggttcgcagaggaccgagtccagaggtcactgctgcaccaaccaca
gagaccccatccaaaccgggggctgcgagtgaagactcgaatgccccgaccccatctcga
ccagctggaaagagcaaacagcagctcaacatccgtgccgaactggagaaaagacaagga
ggaaaaccattactcaacttggtggtcataggtcatgtagatgctggtaagagcactctc
atgggtcatctgttatatctgctggggaacgttaataagagaaccatgcataaatatgag
caagaggccaagaaagctggcaaagcctcgttcgcctatgcgtgggtactggatgagaca
ggagaggaaagagacagaggagtgactatggatgtgggcatgacaaaatttgagaccgac
tcgaaggttgttactctgatggatgcaccaggacacaaagacttcattccgaacatgatc
acaggggcggcacaggcagatgtggctgtgttagttgtagatgccagccgcggggagttt
gaggccgggttcgaggcaggggggcagacccgtgagcatggcctgctagttcgatccctc
ggagtcacgcagcttgctgttgctgtcaacaagatggatcaggttaactggcagcaggag
aggttccaggaaatcgtctctaagctcggtcactttctgaagcaggctggttttaaggat
tctgatgtgtattacatccctaccagtggcctatcaggagagaatctgaccgctaggagc
aaagtagcagaacttacagcctggtacactggaccatgcctactggaacagatagatgca
tttaaacctccccagaggtcagtggagaagcccttcaggctttgtgtctcagacgtcttt
aaagatcagggctctggattctgtgtgacggggaaggttgaggctggcttcattcaaaca
ggagataaattgctggccatgccccctaatgagacctgcactgttaaagggatcactctc
catgatgaagcgttagactgggcagctgccggtgatcatgtcagtctaactgtcacaggc
atggacatcatcaaaataaacattggatgtatattctgtgatcccaaagagcccatcaga
gcctgcacaagattccgagcaaaaattctcctctttaatatagaagttcccatcacgaaa
ggcttccctgtgctgttgcattatcagaccataagcgaaccggctactattaggaagtta
gtcagtatattacacaagagcagtggagaagttctcaagaagaaaccaaagtgtttgagt
aaaggacagaacgcagtggtggagattcaaacgcagaggcctgtggctctggagctctat
aaggactataaagaactggggcggttcatgctgagatatgtgggctccaccattgctgct
ggagttgtcacagagatcaaagagtaa
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