Chanodichthys erythropterus (predatory carp): 137008854
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Entry
137008854 CDS
T10334
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cery04515
]
137008854 (clstn1)
Cell adhesion molecules [BR:
cery04515
]
Cadherins
Cadherin related
137008854 (clstn1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
TylF
Cadherin_C_2
PRIMA1
EphA2_TM
TMEM132_C
PFF1_TM
FAM176
Motif
Other DBs
NCBI-GeneID:
137008854
NCBI-ProteinID:
XP_067226681
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All DBs
Position
20:20318816..20369584
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AA seq
979 aa
AA seq
DB search
MRIRGVKPFASAVGLLLGLLCAVEAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTFTKEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKE
HTFTIQAYDCGEGPDGGNMKKSHKATVHIQVNDVNEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICSYEIVTPDVPFTIDKDGNIKNTEKLNYSKERMYKLTVTAYDCG
KNRASEDVLVKINIKPTCKPNWQGFNKRIEYEPGTGSLALFPSMHLETCEEPITSIQASI
MLETNHIGKGCDRDTYSEKSLHKLCGASTGTVELLPAPSNSANWTVGLPTDNGHDSDQVF
EFNGTQAIKVPEGVVSTTLKEPFTISVWMRHGPGSREKETILCNSDKTEMNRHHYSLYVH
NCRLVLLLRQEPTESENYKPAEFHWKLDQVCDKEWHHYVLNIEFPAVTLFVDGATFEPFL
VTEDYPLHASKIETQLTIGACWQDLSGHDNDTETLSEPLTGGSARMTQYFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVEFNPNQSSLSLEGDDIESFEKVMQHI
SYLNSRQFPTPGIRHLRVTTTVKCFNEETCISVPDSEGYVMVLQPEEPKISLSGIDHFAR
GAAEFESTEGVTLFPELRIVSTITREVEVEAETEAEGEDDPTVQETVVSEEIMHNLDTCE
VTVVGDDLNGDHESLEVDLAQIQQRALEMSSSNVGMVITGVNTMANYEQVLHLIRYRNWH
TEALFDRKFKLVCSELNGRYISNEFKVEVNVIHTANPMDHANNAMVQPQFINQVQHASVD
LSGHNLANTHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQSTMRDQENGKENEM
DWDDSALTITVNPMETYEDQHSSEEEGDEEEEESEDGEEEDDITSAESDSSEDEGGEQED
QQGSSRQQQLEWDDSTLNY
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgcggatccgtggggtgaaacctttcgcttctgcggtcggtctgcttttaggactatta
tgcgcggtggaggcagccaaagtaaataagcacaagccatggatcgagaccacgtatcac
ggtatcgtaacggaaaatgacgacaaggttctcctggaccctccgctgatagccttggat
aaagatgccccgttgcgctatgcagagagttttgaggtgaccttcaccaaagaaggggag
atctgcggcttcaggattcacgggcagaacgtgccgttcgaggcagtggtgttggataag
tccaccggggagggtgtgatccgggccaaggataaactggactgtgagctgcaaaaggag
cacactttcaccatccaggcctacgactgtggagagggacctgatggcggcaacatgaag
aaatcccacaaggctaccgtccacatccaagtgaatgacgtgaacgagtactctccagtg
ttcaaagagaagtcctacaaagccacagtgatcgagggcaaaaagtatgacagcatcctg
aaggtagaggccgtggacgctgactgctctttccagttcagtcagatctgcagctatgaa
attgtcactcccgatgtgccctttaccattgacaaggatggtaacatcaagaacacagag
aagctgaactatagcaaggaacgcatgtacaaactcactgtgactgcgtacgactgcggt
aaaaaccgcgcatctgaggacgtccttgtcaaaatcaacatcaagcccacctgcaaacca
aactggcaaggatttaataaaaggattgaatatgagcctggtacaggaagtctagccctg
ttccccagcatgcacctggaaacctgcgaggagccaatcacctccattcaagccagcatc
atgctggagactaatcacatcggcaagggctgcgaccgagacacttactccgaaaaatct
ttacacaagctctgcggtgccagcactggcactgtggagctgctgcctgctcccagcaac
tctgccaactggaccgttggcttgcccactgacaacgggcacgacagcgaccaggtgttt
gagtttaacggcacccaggccatcaaggtccctgagggtgtggtgagcaccaccctgaag
gagcccttcaccatctcagtgtggatgagacatggacctggaagcagggagaaggagacc
atcctctgcaactctgacaagaccgaaatgaataggcaccactattcgctgtacgtacac
aactgtcgtcttgtgctgctgctgcgtcaggaacccaccgagtctgagaattacaaaccg
gctgaattccactggaaactcgatcaagtgtgtgataaggaatggcatcactacgtgttg
aacatcgagttcccagcagtgactttgtttgtggatggtgccacctttgagcccttcctg
gtcacggaggattaccctctgcatgcctccaagatcgaaacccagctcaccatcggcgcc
tgctggcaagacctctcaggacatgacaatgatactgagacactctcagagcctttgaca
ggtggcagcgcacgcatgactcagtatttccggggcaacctggcgggactcatgatccgc
tccggcaaactggaaaacaagaaggttattgactgcctgtacacctgcaaggaaggcctt
gacgtgcagcttccagaggaagtggcctctgctgtgaaggtggagtttaaccccaaccag
tcctctctgagcctggagggagatgacattgagagctttgagaaggtcatgcagcacatc
tcctacctgaactcccggcagttccccactccaggaatccgccatctgcgtgtcaccaca
actgtcaaatgcttcaatgaggagacgtgcatctccgtgccagactctgaaggctatgtg
atggttctccagccagaggagccaaagatcagcctcagtggaattgaccattttgcccgt
ggagcagctgaatttgagagcacggagggtgttacactcttccctgagctgcgtatcgtc
agtaccatcactcgtgaggtggaggtggaagctgagaccgaggccgaaggcgaggatgat
cccacagtgcaagagacggtggtatctgaggagatcatgcataacttggacacgtgtgag
gtgactgtagtgggagatgatctgaatggagatcatgagagtttggaggtggatctggcc
caaatccagcagagagctctggagatgagctcttctaacgtgggcatggtcatcacaggg
gttaacaccatggcaaactatgaacaggtcctgcacctgatccgctacaggaactggcac
acagaggctctttttgacaggaagtttaaacttgtctgctctgaactcaatggccgctac
atcagcaatgaattcaaagtcgaggtcaacgtgatccatacagcaaaccccatggatcat
gccaacaatgctatggtacaacctcagttcattaaccaagtacaacacgcttcagtggac
ctgtctggacacaacctggccaacacacatcaagcctcagttgtccccagtgccgccacc
atcgttattgttgtatgcgtaagcttcctggtgtttatgatcatcctgggcgttttccgt
atccgtgctgcccaccagagcacaatgagggaccaggaaaatggcaaagagaacgagatg
gactgggatgactcggccctcaccatcacggtcaacccaatggagacttacgaagaccag
cacagcagcgaagaggaaggagatgaggaagaggaagagagcgaggacggagaggaggaa
gacgatatcaccagcgcagagtcagacagcagtgaagatgagggcggcgaacaggaagac
cagcagggttcgagcagacagcagcagctggagtgggacgactctaccctcaactactga
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