Chanodichthys erythropterus (predatory carp): 137009024
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Entry
137009024 CDS
T10334
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03250
Viral life cycle - HIV-1
cery04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
137009024 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
137009024 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cery03400
]
137009024 (samhd1)
DNA repair and recombination proteins [BR:
cery03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
137009024 (samhd1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
PDEase_I
Motif
Other DBs
NCBI-GeneID:
137009024
NCBI-ProteinID:
XP_067226996
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Position
20:complement(7257894..7280577)
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AA seq
630 aa
AA seq
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MMDKRIKRPREDEECVVNLTQVCDGGFWRWSVDETVAYLRREGLEQWEQKFRDHGITGSG
LPYLTEVLLEKMGISPLGSRLQILHCLQKLWQISKEPMKVFNDPIHGHIELHPLLVQFID
TPQFQRLRHIKQLGGTYLVFPGASHNRFEHSIGVGYLAGCLVKALHERQPELFITKQDIL
CVQIAGLCHDLGHGPFSHMFDGMFIPKVRPGEKWKHEIASVQMFDHLVKVNGLEEVMKHH
GLRLPDDLIFIKEQIAGPLDNSVLDRSWPYKGRPMEKSFLYEVVANKRNGIDVDKWDYFA
RDCYHLGIQNNFDYQRFLKFARVCEVRGKKHICTRDKEVGNLYDLFHTRNCLHRRAYQHK
VGNIIETMITEAFVKADPHIRIQGSAGRFFTISSAIEDMEAYTKLTDHIFEQILYSSAPE
LSEARTILHNIVCRRLYKCVGQTTSETHVDVSQEKLLDWAKEVAQSKPSGTDGNLIAEDF
VVSVIYMDYGMKDKNPINSVHFYCKNDPTKAIKIRKNQVSKLLPEQFAEQLIRVYCKKTD
DKSLEAAKKYFVQWCMDRNFTKPQDGDITAPELTPLKRDWHTLERDDDGNSSEVDVNDEG
MHPGIREETPRKTGRNVKMNLFQAQGQNKL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgatggataagcggattaaacggccaagagaagatgaagagtgtgttgtcaatctgacg
caggtttgtgatggagggttttggcgctggagcgtcgatgaaacggtcgcttatctgcgg
agagaaggactcgagcagtgggagcagaaattcagagaccatggcataacagggtcagga
ctgccataccttaccgaggtgcttttggagaagatgggtatttcccctctgggatcacgc
ctgcaaatcctccactgccttcagaaactctggcaaatctcaaaagaacccatgaaggtt
ttcaatgaccccatccatggccacatcgagttgcatcctctgctggtccagttcatagac
acgcctcagtttcagaggcttcgccacatcaaacagctgggaggaacttacctggtcttc
cctggggcttcccataaccgcttcgagcactcgatcggggtgggatatttggcaggatgt
cttgtcaaggcactacatgaaagacagccagagctcttcataacaaagcaagatatactc
tgcgtgcagattgctggcctgtgccatgacttgggtcatggcccgttttctcatatgttt
gatggcatgttcatcccaaaagttcgacctggtgagaaatggaagcatgagattgcctca
gtccagatgtttgaccacctggtgaaggttaatggtcttgaggaggtcatgaaacaccat
gggttaagactccccgatgaccttattttcatcaaagagcagatcgccgggcccctggat
aactctgtcttggaccgttcgtggccatataagggcaggcctatggagaagtcatttctg
tatgaggttgtggcaaataaaagaaacggtatagatgtcgataagtgggattacttcgca
agggattgttaccatcttggcatccagaataattttgattatcaacgattcctcaaattc
gcaagagtgtgtgaagtgagaggaaagaaacacatttgcaccagagacaaggaagttggc
aacctctatgacttgtttcacactcgtaactgcctccatcgccgggcgtatcaacacaaa
gtgggcaacatcattgagaccatgataacggaggcctttgtaaaggctgatcctcacatc
cgaatccagggctctgctgggaggtttttcacaatctcttcggctatagaagacatggag
gcctacaccaaactcacagatcatatctttgaacagatcctgtactcatctgcgccggag
ctatctgaggctcgaaccatcctgcacaacattgtatgtagacggctgtacaagtgtgtg
ggtcagaccacatcggagacgcatgtggacgtgtcacaggaaaaactgcttgactgggcg
aaggaagtggcccagtccaaacccagtggcacagatggcaacctgatagctgaggacttt
gtagttagtgtaatttacatggattatggaatgaaggacaaaaaccccatcaacagtgtt
cacttttactgtaagaacgatcccaccaaagccatcaagatccgcaagaatcaggtgtcc
aaactcttgccggagcagttcgctgagcagctgatcagggtttactgtaagaagacggat
gacaagagcctagaagctgctaaaaagtactttgtccagtggtgcatggacaggaacttc
actaaaccacaggatggagatataactgctccagagctcacgccactcaaacgagactgg
cacacactagaacgggacgacgatggcaatagcagcgaggtagatgtcaacgatgaaggc
atgcatccaggaattagagaagaaacgcccaggaagactggacgtaatgtaaagatgaac
ctttttcaagctcagggacaaaacaagctctga
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