Chanodichthys erythropterus (predatory carp): 137009067
Help
Entry
137009067 CDS
T10334
Symbol
pdzrn3a
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137009067 (pdzrn3a)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
137009067 (pdzrn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137009067
NCBI-ProteinID:
XP_067227060
LinkDB
All DBs
Position
20:15466256..15521103
Genome browser
AA seq
1027 aa
AA seq
DB search
MGFDLDRFEGFVDPDLICKLCGKVLEDPLSTPCGHVFCAACALQWLSKVNSCPVLCQKIT
TKELNHVLPLKNLISKLDIKCDHHKRGCSRVMKLQHLSEHAEMCDFSPVRCRNEGCDAVL
NLKDVDSHMRERCEHRPVEVCKNGCGLVLTLKERSEDHSCLQALKTRSGLLQTKALSLEK
ELKRQSLSFSKREKSLLSKLSALHCELHITALTFQKKITEYKSRIDALSNSWMPLDKGED
TRSLKVTLHRTSGSLGFSIIGGRLSEEEEEHEDFSDGIYISKIVDNGAADKAGLHVHDRI
IEVNGRSLSIATHDQAVEAFQTAKDPIEVEVLRRAAHETHEPARGVNNSTQTNITLKYLK
HIETMAKLPSPPGPLRMAMLDCFHSSSQCQMARRDSSYPADFDDGVQKDIESRGLEYEEV
DLQKKTTQDKLGLMLCYKTDDETTAIYISEIDPEGIAAKDGRVQEGDQIIQINGVDIQSH
EEAVTLLTKVESKNVTLLVARPESQDIGWLEEDRNNLADDLHMGMLEQQHNKSTHEEDGG
TTDTATLPSNHHEKDSGVGRTDESTRNDESSEQDILGDDQNSLCDTLPENHKKYSEGTFE
SGDMHLSNDSFLSVDNGDSGNFLCIPGTACESFQKQLELKCLVNGNGLQGFLEHDDTLYG
KPVSVDCDDQEVQMLNEELLNIELECLSIIRAHRLQTEGDDQQAKSCCTKHLTEQINTQV
HQDLINNQVDNEGSTSAYNTGESCWSLHPALELDSLDSQRMVPGDKSKSSPMHRRNSTTA
CSKHHLSPIQEISPTKSLPGDPEVTNQGKRKQSKKRNPRKSLLTSLHHSSYKNTYIPAHA
QHYQSYMQLIQQKSSVEYVQSQVSLASLCKNPESTPTNARPKMGWKVKIRSDGTRYITKR
PIRDQLLKERALRIREERCSATTDDDAASELKLGRYWNKEERKQHAAQAKERRELVKQCH
TENRGQTGAINNKKEPDIIQLSRKKMMKRRNKRIFDNWMTIQELLTHGTKSTDGTRLYNS
FLSVTTV
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgatctagaccgttttgagggttttgtggatccggacttaatatgtaaactg
tgtgggaaagttttagaggatcctctcagcactccgtgcggacatgtcttttgcgccgcg
tgcgcgctacagtggctctccaaagtcaacagctgccctgtcctatgccaaaagatcacc
accaaagagctgaaccacgtcctgcccctaaaaaacctaatttctaagctggacatcaag
tgcgaccaccataaacgaggctgcagccgggtaatgaagctccagcatctttcagagcac
gcggagatgtgcgacttctctccggtcagatgcaggaatgaaggatgcgacgcggtgctc
aacctgaaggatgtggattcacacatgcgggagagatgcgagcacaggccggtggaggtc
tgtaagaatggatgtggactcgtgctgacgctcaaggagaggtcggaggaccacagctgt
ctccaagcacttaagacacgcagcggtctcctccaaaccaaagcgctgagtctggagaaa
gagctgaagcgtcagtccctgagcttcagtaagagagagaagtctctcctctccaaactc
tccgcgctccactgcgagctgcacatcacagcgctcacatttcagaagaaaatcaccgag
tacaagagcaggattgacgcgctgtcaaacagctggatgcctctcgataagggagaagat
acaaggagcctcaaagtcacccttcacagaacatcaggatctcttggattcagtatcatc
ggaggaagattgtctgaggaagaagaggagcatgaagatttcagtgatgggatctatata
tccaagatagtggacaacggagcagctgacaaggccggactgcatgttcatgacaggatc
attgaggtaaatggaaggagcctttccatagctacacatgaccaagcagtagaggccttc
caaactgcaaaagaccccattgaggttgaggtactgcgcagggcggcgcacgagactcat
gaaccagcccgaggagtgaacaacagtactcagaccaacattacactgaaatatttgaaa
catatagagactatggccaagttaccgtcacctccgggaccactgcgtatggctatgctg
gattgtttccattcatcctctcagtgtcaaatggcaagacgtgactcctcttaccccgct
gacttcgatgatggcgtacagaaagacattgagagtagaggactggaatatgaggaagtg
gatctccagaagaaaactactcaggataagcttggcctgatgttatgttacaagactgac
gatgagacgactgccatttatattagtgagattgatccagaaggaattgcagcaaaggat
ggcagagtccaggaaggagaccagattatccagatcaatggagtggacatccagagccat
gaggaggcagtgacacttctgaccaaggtggagagtaagaatgtgaccctcctagtggct
cgaccagaaagtcaggatattggctggttggaggaggatagaaacaacttggcagatgat
ttgcacatgggcatgctggagcaacagcataacaagagcacacatgaagaagatggaggc
actactgatacggcaaccttaccgtccaaccatcacgagaaagacagtggcgttggccgc
actgatgaaagcacacgtaatgatgaaagctcagagcaggacatcttgggagatgatcag
aattccctttgtgacacactcccagaaaaccacaagaagtatagtgaaggcacttttgaa
agtggggacatgcacttaagcaatgactccttcctttcagttgacaatggagacagtgga
aacttcctttgtatacctggcacggcatgtgaaagtttccagaaacagcttgaactgaaa
tgcctggtcaatggtaatggccttcagggatttctggagcatgatgacacactatatgga
aagccggttagtgtagactgtgatgatcaggaggttcagatgcttaatgaggagttactg
aacattgagctggagtgcctgagtatcatacgagcacacaggcttcaaactgagggtgat
gatcagcaagccaaaagttgctgcaccaagcacttaactgagcaaataaatactcaagtc
catcaggacctcatcaataaccaggtggacaatgaaggctctactagtgcttacaacact
ggagagagctgttggagcttacatcctgctctggagttagattctcttgactcccaaagg
atggttcctggagacaagagtaaaagttctcccatgcatagacgcaactcaacaacagca
tgctccaaacatcacctctctccaattcaggagatcagccccaccaagagtttacctgga
gatccagaagtcacaaatcaggggaaaagaaagcaaagtaagaaaaggaacccaaggaag
agtcttttgacttccttacatcattcctcatacaagaatacttacatcccagcccatgca
caacattaccaaagctacatgcaacttatccagcagaagtcatctgtggagtatgtccag
agtcaagtcagcttagccagcttgtgcaagaacccagaatccactcccactaatgccagg
cccaagatggggtggaaggtaaaaatccgtagtgatggaacaaggtacatcaccaaaagg
cccatcagggaccagctgctgaaggagcgtgctttgcgcattcgagaagaacgctgcagc
gcaactacagatgatgatgcagcaagtgaactaaagctgggtcgatactggaacaaggaa
gagcgcaaacagcatgcggcacaagccaaggaacggcgggaactcgtgaagcagtgccac
acagagaacaggggacaaacaggagcaattaacaacaagaaggagccggatattatccag
ctgagccgtaaaaagatgatgaaaaggaggaacaagaggatatttgacaactggatgacc
attcaggagctgctgacacatgggacaaagtccacagatgggactagactatataattcc
tttctttctgtgactacagtgtaa
DBGET
integrated database retrieval system
