Chanodichthys erythropterus (predatory carp): 137009651
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Entry
137009651 CDS
T10334
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137009651 (rarga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cery03310
]
137009651 (rarga)
Transcription factors [BR:
cery03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
137009651 (rarga)
Nuclear receptors [BR:
cery03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
137009651 (rarga)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
137009651
NCBI-ProteinID:
XP_067228138
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Position
20:30953592..31017897
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AA seq
506 aa
AA seq
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MATNRERQVGHMTGFPPAVYPFAFNSIRSHSPFDLLANSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKDEVVPPESYELSG
ELEELVNKVSKAHQETFPSLCQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPERVDRLQEPLLEALKIY
ARRRRPNKPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
QTESTEKKPEPEQPAPPPALLTMKKEQEDEDDSWATENGSEPSPEEEDDDDDDGEEERGT
DSDGEAWAGQEPNVDVSRKSHGGRAQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaccgggaacggcaggtgggtcacatgaccggtttcccacctgctgtctac
ccttttgccttcaattccattcggagccactcccccttcgacctgctggccaatagtagc
ctgtttgggcggtttggggcggaccttcccaaagagatggcagcgttgtcggtggagacc
cagagcaccagttcggaggagatggtgcccagctccccttctccaccacctccgcctcgt
gtttacaagccctgcttcgtctgccaggacaagtcttctgggtaccactatggtgtcagt
tcttgcgagggttgcaagggtttcttccgtcgcagtattcagaagaacatggtgtacacc
tgccaccgtgacaagaactgccagataaacaaggtcacacgcaaccgttgccagtactgt
cggctgcagaagtgcttcgaggttggcatgtccaaggaagctgtgcgcaatgatcgaaat
aagaagaagaaggacgtgaaggatgaggtcgttccaccagagagctacgagctgagtggg
gaactggaggagctggtcaacaaagtgagcaaagcacatcaagagaccttcccttcactc
tgccagctgggaaaatacaccacaaactcaagctcagaccaccgggttcagttggacttg
ggcctatgggacaaattcagtgagctttcaaccaagtgcatcattaaaattgtggaattt
gccaaacgccttccgggcttcaccaccctcaccatcgcagatcagatcaccctccttaaa
tcagcttgcttggacattctaatgctgcgaatctgtacacgatacacaccggagcaggac
accatgaccttttcagatggactgacccttaaccggactcagatgcataatgctggcttc
ggcccgctcactgacctggtgtttgcctttgctggtcagcttctgccccttgagatggat
gacactgagactggcctcctcagcgccatctgcctaatttgtggagaccgaatggatctt
gaggagcctgagcgtgtagatcgtctgcaggagcccctgttggaggctctgaagatctat
gcacgccgccgccgacccaataaaccctacatgttccctcggatgttgatgaagatcacc
gatctacgtggcatcagcaccaagggagcagaaagggccataactctgaagatggagatc
ccaggccccatgcctcctctcatccgagagatgctggaaaatccagaggccttcgaggat
cagactgagtccacagagaagaagccggagcccgaacaacccgctcctccacccgccctg
ctcactatgaagaaagagcaggaggacgaggacgacagctgggccacagagaacggcagc
gagccttcaccggaggaggaggacgacgatgatgacgacggggaggaggagaggggtaca
gacagtgacggagaggcctgggctggccaggaacccaatgtggatgtgtccaggaagagc
catggagggagagctcaatga
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