Chanodichthys erythropterus (predatory carp): 137009711
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Entry
137009711 CDS
T10334
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
137009711 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137009711 (atrx)
03036 Chromosome and associated proteins [BR:
cery03036
]
137009711 (atrx)
Transcription factors [BR:
cery03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
137009711 (atrx)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
137009711 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
137009711
NCBI-ProteinID:
XP_067231742
LinkDB
All DBs
Position
1:complement(27945572..27998566)
Genome browser
AA seq
2052 aa
AA seq
DB search
MSTEILRSSKLNTLVTKLHEFLGNSPDDESIDSQDISNGKMATSDLNIPVEKMNEPGCSS
EMTKPSSSRSKRKPSFVTKHTAVDEPECANESGGEHCADDSVQSGLDINKLPQGTVVVKP
EPVANEAKDEFRGPEFRIRGSKVKEDSTRKRPDEQLQEIFNCTACGQQVNHFQRDSIFQH
PALHVLICKSCFKYYMSDDISKDDEGMDEQCRWCAEGGNLICCDYCSNAFCKKCILRNLG
RKELSEIMSEESKWHCYVCCPEPLKDFVKTCEKVLLNLESSYKKPRGDNDKTKREDRKHK
HTKREKTAVNGQDYASDGTGTLTFSCKTLKVPKELVKKTKKLIETTNGLNRTFVQFLQHK
SKGPDVSAVSYRHLKAFKSVLADLKKAHAALEDSLEKEFEEKGLKFQNGEEQRPPDSQTA
GKTVNSHHADPTTVREDGLDCPTKDHNPLVEEENQQNSYSADVEMKESLPLSPEKAQDWS
EESEAKDQEMTDNPDFEESSVPAGEVSLDKDIVSVPPSVPEELFEMVESLAVKKEDDAGN
LTDSSDGKSTSNAEVVESNKSLTKLGKKLVVKLTPVPLKITIKRDKSNERSPSEDMDGET
LQKEVQDSRRSPRMKTTPLRKSPEAKTKREPRSSTTKEERSDTVEEQCDSDSDEVPEVLQ
TAALKASSDESEPENCGNASGKRTKKKLASRSTEKAKPKRKLDMGSSDSDQSNKSSTAKK
RSAKKKKGRESDSSNHNSDLEKEMKNLAKIDSGKKKSKGVKKEENECSKEGKKGPKRSFE
RKRRSQKEKAKPKEEFSSSDEEEEEEKEEKQADNSDEDSDQQKIKPILESVMASIDGFHQ
SSGDEVELKAESSQVVDDDDDPENRIAKRMLLAQIKANYSSGADSSSDDENADKEDGDST
KKGKSGAKKQEGSEKEEEDETSDSGSDVDVKKGGRRHRLLRKKLTLSEGDSDDETPVKNK
KETKKRGRRKVDSDDSADSDFEQSHSGSSDASVLSEAVSEDAEENKSNKRKTRSSRKAAK
DGERSYQKEKKKRRRIKVQDSSSSGKSGEEEDGDGDGEGDDKGTPKNRKKIRKIIKDDNL
RTETRDALKEEEERRKRIAERERLREKLRETIVVEESSQVTCPITTKLVLDEDEETKEPL
VQVHRNLVTKLKPHQVDGVQFVWDCCCESVKKVEKSSGSGCILAHCMGLGKTLQVVTFLH
TVLLCEKLNFSTALVVCPLNTVLNWLNEFEKWQEGLKDEESLEVTELATVKRPQERAYAL
QRWQEDGGVMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHILKNEAS
AVSKAMNSIKTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQC
ADSTLADVRVMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLAVRLTPIQCKLYRY
YLDHFTGVGSALESGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMEE
FIASETEESSMSLTSEDEKPKRKKKRGKGKEQSSDKSDSDDLEVIKEWNTSSRGGNPEGR
NRAEPVEEVRAPSNSGPGSPSPDWYKEFVVEADSEVLEHSGKMVLLFEILRMAEEVEDKV
LVFSQSLISLDLIEDFLELAGRAKEEGKLSPYKGEGKWFRNIDYYRLDGSTNAMTRKKWA
EEFNDTSNVRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQVKT
VFVYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQQIERHFTMNELTELYTFEPDQLDDPS
EKKSKRATPMLPKDPVLAELLHSYKDQIVGYHEHDSLLDHKEEEALSEEDRKAAWAEYEA
EKKGLSMRFNQPSYSQMGVGSAPNSYFPFNVAALASMSNQQLEDLINQGRQKVLEATSAL
KSVPREPLEDIIAQVWKENPSLPEAQVQSMALGRQAGFELEIKHREAVYRDVLSKQQTLM
MYVQKVIANRKVQEQQMALARQGMLLNQLAMQNGLAAPMNQMDLLGLYQQLGALQGLPSS
QLGKNPGPSKGL
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagagatcttaaggtccagtaaactgaatacattggtgactaaacttcatgag
ttcttgggtaattctccagacgacgaaagcattgattctcaagacatttccaatggtaaa
atggcaaccagtgacttaaacatccctgttgagaaaatgaatgagcccggttgctcctca
gaaatgaccaaaccatcatcttcacgctcaaagagaaaaccttcatttgtgaccaagcac
actgccgttgatgaacctgaatgtgcaaatgagagtggaggtgaacactgtgcagatgac
agcgtgcagagcggtctggatattaacaagttaccacaaggcacagtggtggtgaagccg
gaaccggttgctaatgaagctaaagatgaattccgaggtccggagttccgtattagagga
agcaaagtgaaagaggacagtacacgtaaacgcccagacgagcagctccaggaaatattt
aattgcacagcatgtggacaacaagtcaatcattttcagagggattccatctttcaacat
cctgcactgcatgttcttatctgcaagtcatgtttcaaatattatatgagtgatgatatc
agcaaggatgatgaagggatggatgaacaatgcaggtggtgtgcagagggtggtaatctg
atttgctgtgactactgcagcaatgccttctgcaaaaaatgcattttgcgcaaccttggg
cgaaaagagctgtctgaaatcatgagtgaagaaagcaaatggcactgctatgtgtgttgc
ccagagccgctgaaggactttgttaaaacctgtgaaaaagttttgctcaatttggaatcc
tcttacaaaaagcccaggggagacaatgacaagacaaagcgtgaagaccgcaaacacaag
cataccaaacgagaaaaaactgctgtaaacggacaggattatgcatcagacggaacggga
acgctaaccttttcctgtaagacgttgaaggttccgaaagagctagtcaaaaagaccaaa
aaactaatcgagaccacaaatggtttgaatcgtacttttgtacaattcctccagcacaaa
tcaaaaggccctgacgttagtgcagtaagttatagacacttaaaggccttcaaatcagtt
ttggctgatctgaaaaaggcccatgctgctctggaggattctcttgaaaaagaatttgaa
gagaagggcctcaagtttcagaatggagaggagcaaagaccaccagacagtcaaactgca
ggtaaaacagttaactcgcatcatgctgaccccactactgttagagaagatggtttggat
tgccctaccaaggaccataatcctttggtagaagaggaaaaccaacagaacagttactca
gctgatgttgaaatgaaggagagccttccactctcaccagaaaaagctcaggactggtct
gaagaaagtgaggctaaagatcaggaaatgacagataatcctgactttgaggaaagctct
gtcccagctggtgaagtgtctcttgataaagacattgtgtctgttccaccatctgtccca
gaggaactctttgagatggtagagagtcttgctgtaaagaaagaagatgatgctggcaac
ttgactgattctagtgatggaaaatcaacgtccaatgctgaggttgtggaatccaataag
agccttacaaaactgggtaaaaagcttgttgtcaaactaacacctgttcctcttaaaatt
accataaaacgagataagagcaatgaacggtctccttcagaagacatggatggtgagaca
ttacaaaaggaggttcaagatagcagacgctcccccaggatgaagaccacacccttacgc
aagtcaccagaggcaaagaccaaacgtgaaccaaggtcgtcaacgacgaaggaagagcgc
agcgatacagtcgaggagcagtgtgattcagattcagatgaagtccctgaggtcctgcag
actgcagctttgaaggccagctctgatgagagtgaacccgaaaactgcgggaacgcttct
ggcaaacgtaccaagaagaagttggcttcccgctcaaccgagaaagcgaagccaaagcgc
aaactcgatatgggctcctcagattcggaccagagcaacaagtcgtcaacggcaaaaaaa
agaagtgccaaaaagaagaagggcagggaatctgactcctcaaaccacaactccgatctt
gagaaagagatgaaaaacctggccaagattgatagtgggaaaaaaaaatccaaaggcgtc
aaaaaggaagagaacgaatgcagtaaagagggcaaaaaaggtcctaaaaggtcattcgag
cgaaaacgaaggtcacagaaagaaaaggcaaagcccaaggaagagttttcctccagtgat
gaagaggaagaggaggagaaggaggaaaagcaggctgataactcagatgaagacagtgat
cagcagaagattaaaccaatacttgagtccgttatggctagtattgatggtttccatcag
tcatcaggtgatgaagttgaattaaaggctgaatcctctcaggtggtggatgatgacgat
gaccctgagaatagaattgccaagaggatgcttttggcacagatcaaagccaactattca
tctggagctgacagttcatctgatgatgaaaacgcagacaaagaggatggggattcgaca
aagaaaggaaaatctggtgcaaagaagcaagaaggaagtgaaaaagaggaagaggatgaa
acttcagactcgggctcagatgttgacgtgaagaaaggtggacgcaggcaccgtttgttg
cgtaagaaattgactctaagtgaaggtgactctgatgacgagactccagtcaaaaacaag
aaagaaaccaaaaagagaggcaggcggaaagtggacagcgacgattcggcagactcggac
tttgagcagtcgcactcgggctccagtgatgcgtcagtgctcagcgaggctgtgagtgaa
gacgcggaggaaaacaagagcaataaacgcaaaacacggtcgtccagaaaagcagccaaa
gatggtgagagaagttaccagaaagagaagaaaaaacgacgtcgcattaaggttcaggac
tcctcatccagcggcaagagtggagaggaagaggatggagatggtgatggtgaaggggat
gacaaaggaacacccaaaaatcgcaagaagatccgcaagatcattaaagatgacaatctg
cggacagagacccgagatgctctgaaagaggaagaggagaggaggaaacgcattgctgag
agggagcggttgagggagaaactacgagagactattgtggtggaggagtcatcacaggtc
acgtgtcccatcaccacaaaactggtgctcgatgaggatgaggagaccaaggagccacta
gtgcaggttcacaggaacctggtgaccaaacttaaaccccatcaggttgatggtgtgcag
tttgtgtgggactgctgctgtgagtcagtgaagaaagtagagaagtcttctggttctggc
tgtattctggcccactgcatgggtctgggcaaaaccctccaggtggtgacatttctccac
actgtgctgctgtgcgagaaactgaacttcagcacagctctggtggtgtgtccactcaac
actgtgctcaactggctcaatgagtttgagaagtggcaagaaggcttgaaggacgaggag
agtttagaggttaccgagctggccacagtgaagagacctcaggagagagcgtacgcttta
cagcgctggcaagaagatggtggcgtcatgatcataggctacgagatgtaccgcaacctc
acgcaaggacgaaacatcaagagcaagaagctgaaagaaacctttcagaaaactctagtt
gatccaggtccagattttgtcatctgtgatgagggtcacatcctgaagaacgaagcatct
gctgtttccaaagccatgaactccatcaagactcgtcggcgggtggtgctgacgggaact
ccactgcagaacaacctgatcgagtatcactgtatggtgaacttcattaaggagaacctg
ctgggatcagtgaaagagttcagaaaccgcttcatcaaccccattcagaatggtcagtgt
gccgactccacactcgctgatgttcgtgtcatgaagaaacgagcacacatcctctatgag
atgctggcaggatgtgtccaaagaagagattacactgcccttacaaaattcctgccacca
aaacatgagtatgtgttagcggttcggttaacacccattcagtgcaagctttatcgatac
tatctggatcactttacaggtgtcggttctgccttggagagtggaagaggtcgtgcggga
accaaactcttccaggatttccagatgctcagcagaatctggacccatccgtggtgcctc
cagctggactatatcagtaaagaaaacaagggatacttcgacgaggacagtatggaggag
ttcatagcctcagagacagaggagtcctccatgagtttgacctctgaagatgagaagccc
aaaaggaagaagaaacgaggcaaaggaaaagagcagagctcagacaagtctgacagtgat
gacctggaagtgattaaggagtggaacaccagctctcgtggtggaaaccctgaggggagg
aatagagcagagcctgtggaggaggttcgggctccgtccaactctggtcctggcagccca
tcaccggactggtacaaagagtttgtggtcgaggcagattctgaggtgctggaacattct
gggaaaatggttcttctttttgagatcctccgtatggctgaagaagtggaagataaagtg
ttggtgttcagccagtctctcatttctctggacctcatcgaggattttctggagttggca
ggcagagccaaagaggaagggaaactttcgccgtacaaaggtgagggcaagtggttcaga
aacattgactactatcgcctggatggttccacgaatgccatgaccaggaagaagtgggca
gaggaattcaatgacaccagtaatgttcggggtcgattgttcctcatctcaaccagagct
ggttctcttgggatcaacttggtagctgcaaatagagtcataatttttgatgcctcatgg
aacccatcctatgacattcagagtattttcagagtctatcgctttggtcaagtgaagact
gtgtttgtctacaggtttttggctcagggaaccatggaggagaagatctatgaccggcag
gtcaccaaacagtcgctgtccttcagagttgttgaccaacagcagattgaacgtcacttt
acgatgaatgaactgacagagctctacacatttgagcccgaccagctggatgatccctct
gagaagaagagcaagcgggccacacccatgctgcccaaggatcctgtcctggcagaactg
cttcacagttacaaagatcagatcgtcggctaccacgagcatgactctttgctggaccac
aaagaggaagaggccctgagtgaggaagatcgcaaggcagcctgggccgaatacgaggcc
gagaagaagggtctgtccatgcgtttcaaccagccgtcctattctcaaatgggcgtggga
tcagcaccaaactcctacttccccttcaacgtggctgcattagcctccatgagcaaccaa
cagttggaggatttgattaaccagggcaggcagaaagtgttggaggccactagcgctctg
aagtcggtgcctagggaaccactggaggacatcatcgcacaggtgtggaaggagaatccg
agtttaccggaggcccaggttcaatccatggctcttgggaggcaggccggctttgagctg
gaaatcaaacacagggaggctgtttatcgtgatgtcctcagcaagcaacaaactctgatg
atgtacgtgcagaaggtgatcgccaaccggaaggtccaggagcagcagatggccctggcg
agacagggtatgctgctcaaccagttggccatgcagaatggtctcgcggctcctatgaat
cagatggacctgctcgggttgtaccagcagcttggggcgctccagggcctcccctcatca
cagctgggcaagaacccgggcccttctaagggactgtag
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integrated database retrieval system
