| Entry |
|
|---|
| Symbol |
atrx
|
|---|
| Name |
(RefSeq) transcriptional regulator ATRX isoform X1
|
|---|
| KO |
| K10779 | transcriptional regulator ATRX |
|
|---|
| Organism |
cery Chanodichthys erythropterus (predatory carp)
|
|---|
| Pathway |
|
|---|
| Brite |
Transcription factors [BR:cery03000]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
137009711 (atrx)
Chromosome and associated proteins [BR:cery03036]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
137009711 (atrx)
|
|---|
| SSDB |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
1:complement(27945572..27998566)
|
|---|
| AA seq |
2052 aa
MSTEILRSSKLNTLVTKLHEFLGNSPDDESIDSQDISNGKMATSDLNIPVEKMNEPGCSS
EMTKPSSSRSKRKPSFVTKHTAVDEPECANESGGEHCADDSVQSGLDINKLPQGTVVVKP
EPVANEAKDEFRGPEFRIRGSKVKEDSTRKRPDEQLQEIFNCTACGQQVNHFQRDSIFQH
PALHVLICKSCFKYYMSDDISKDDEGMDEQCRWCAEGGNLICCDYCSNAFCKKCILRNLG
RKELSEIMSEESKWHCYVCCPEPLKDFVKTCEKVLLNLESSYKKPRGDNDKTKREDRKHK
HTKREKTAVNGQDYASDGTGTLTFSCKTLKVPKELVKKTKKLIETTNGLNRTFVQFLQHK
SKGPDVSAVSYRHLKAFKSVLADLKKAHAALEDSLEKEFEEKGLKFQNGEEQRPPDSQTA
GKTVNSHHADPTTVREDGLDCPTKDHNPLVEEENQQNSYSADVEMKESLPLSPEKAQDWS
EESEAKDQEMTDNPDFEESSVPAGEVSLDKDIVSVPPSVPEELFEMVESLAVKKEDDAGN
LTDSSDGKSTSNAEVVESNKSLTKLGKKLVVKLTPVPLKITIKRDKSNERSPSEDMDGET
LQKEVQDSRRSPRMKTTPLRKSPEAKTKREPRSSTTKEERSDTVEEQCDSDSDEVPEVLQ
TAALKASSDESEPENCGNASGKRTKKKLASRSTEKAKPKRKLDMGSSDSDQSNKSSTAKK
RSAKKKKGRESDSSNHNSDLEKEMKNLAKIDSGKKKSKGVKKEENECSKEGKKGPKRSFE
RKRRSQKEKAKPKEEFSSSDEEEEEEKEEKQADNSDEDSDQQKIKPILESVMASIDGFHQ
SSGDEVELKAESSQVVDDDDDPENRIAKRMLLAQIKANYSSGADSSSDDENADKEDGDST
KKGKSGAKKQEGSEKEEEDETSDSGSDVDVKKGGRRHRLLRKKLTLSEGDSDDETPVKNK
KETKKRGRRKVDSDDSADSDFEQSHSGSSDASVLSEAVSEDAEENKSNKRKTRSSRKAAK
DGERSYQKEKKKRRRIKVQDSSSSGKSGEEEDGDGDGEGDDKGTPKNRKKIRKIIKDDNL
RTETRDALKEEEERRKRIAERERLREKLRETIVVEESSQVTCPITTKLVLDEDEETKEPL
VQVHRNLVTKLKPHQVDGVQFVWDCCCESVKKVEKSSGSGCILAHCMGLGKTLQVVTFLH
TVLLCEKLNFSTALVVCPLNTVLNWLNEFEKWQEGLKDEESLEVTELATVKRPQERAYAL
QRWQEDGGVMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHILKNEAS
AVSKAMNSIKTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQC
ADSTLADVRVMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLAVRLTPIQCKLYRY
YLDHFTGVGSALESGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMEE
FIASETEESSMSLTSEDEKPKRKKKRGKGKEQSSDKSDSDDLEVIKEWNTSSRGGNPEGR
NRAEPVEEVRAPSNSGPGSPSPDWYKEFVVEADSEVLEHSGKMVLLFEILRMAEEVEDKV
LVFSQSLISLDLIEDFLELAGRAKEEGKLSPYKGEGKWFRNIDYYRLDGSTNAMTRKKWA
EEFNDTSNVRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQVKT
VFVYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQQIERHFTMNELTELYTFEPDQLDDPS
EKKSKRATPMLPKDPVLAELLHSYKDQIVGYHEHDSLLDHKEEEALSEEDRKAAWAEYEA
EKKGLSMRFNQPSYSQMGVGSAPNSYFPFNVAALASMSNQQLEDLINQGRQKVLEATSAL
KSVPREPLEDIIAQVWKENPSLPEAQVQSMALGRQAGFELEIKHREAVYRDVLSKQQTLM
MYVQKVIANRKVQEQQMALARQGMLLNQLAMQNGLAAPMNQMDLLGLYQQLGALQGLPSS
QLGKNPGPSKGL |
|---|
| NT seq |
6159 nt +upstreamnt +downstreamnt
atgagcacagagatcttaaggtccagtaaactgaatacattggtgactaaacttcatgag
ttcttgggtaattctccagacgacgaaagcattgattctcaagacatttccaatggtaaa
atggcaaccagtgacttaaacatccctgttgagaaaatgaatgagcccggttgctcctca
gaaatgaccaaaccatcatcttcacgctcaaagagaaaaccttcatttgtgaccaagcac
actgccgttgatgaacctgaatgtgcaaatgagagtggaggtgaacactgtgcagatgac
agcgtgcagagcggtctggatattaacaagttaccacaaggcacagtggtggtgaagccg
gaaccggttgctaatgaagctaaagatgaattccgaggtccggagttccgtattagagga
agcaaagtgaaagaggacagtacacgtaaacgcccagacgagcagctccaggaaatattt
aattgcacagcatgtggacaacaagtcaatcattttcagagggattccatctttcaacat
cctgcactgcatgttcttatctgcaagtcatgtttcaaatattatatgagtgatgatatc
agcaaggatgatgaagggatggatgaacaatgcaggtggtgtgcagagggtggtaatctg
atttgctgtgactactgcagcaatgccttctgcaaaaaatgcattttgcgcaaccttggg
cgaaaagagctgtctgaaatcatgagtgaagaaagcaaatggcactgctatgtgtgttgc
ccagagccgctgaaggactttgttaaaacctgtgaaaaagttttgctcaatttggaatcc
tcttacaaaaagcccaggggagacaatgacaagacaaagcgtgaagaccgcaaacacaag
cataccaaacgagaaaaaactgctgtaaacggacaggattatgcatcagacggaacggga
acgctaaccttttcctgtaagacgttgaaggttccgaaagagctagtcaaaaagaccaaa
aaactaatcgagaccacaaatggtttgaatcgtacttttgtacaattcctccagcacaaa
tcaaaaggccctgacgttagtgcagtaagttatagacacttaaaggccttcaaatcagtt
ttggctgatctgaaaaaggcccatgctgctctggaggattctcttgaaaaagaatttgaa
gagaagggcctcaagtttcagaatggagaggagcaaagaccaccagacagtcaaactgca
ggtaaaacagttaactcgcatcatgctgaccccactactgttagagaagatggtttggat
tgccctaccaaggaccataatcctttggtagaagaggaaaaccaacagaacagttactca
gctgatgttgaaatgaaggagagccttccactctcaccagaaaaagctcaggactggtct
gaagaaagtgaggctaaagatcaggaaatgacagataatcctgactttgaggaaagctct
gtcccagctggtgaagtgtctcttgataaagacattgtgtctgttccaccatctgtccca
gaggaactctttgagatggtagagagtcttgctgtaaagaaagaagatgatgctggcaac
ttgactgattctagtgatggaaaatcaacgtccaatgctgaggttgtggaatccaataag
agccttacaaaactgggtaaaaagcttgttgtcaaactaacacctgttcctcttaaaatt
accataaaacgagataagagcaatgaacggtctccttcagaagacatggatggtgagaca
ttacaaaaggaggttcaagatagcagacgctcccccaggatgaagaccacacccttacgc
aagtcaccagaggcaaagaccaaacgtgaaccaaggtcgtcaacgacgaaggaagagcgc
agcgatacagtcgaggagcagtgtgattcagattcagatgaagtccctgaggtcctgcag
actgcagctttgaaggccagctctgatgagagtgaacccgaaaactgcgggaacgcttct
ggcaaacgtaccaagaagaagttggcttcccgctcaaccgagaaagcgaagccaaagcgc
aaactcgatatgggctcctcagattcggaccagagcaacaagtcgtcaacggcaaaaaaa
agaagtgccaaaaagaagaagggcagggaatctgactcctcaaaccacaactccgatctt
gagaaagagatgaaaaacctggccaagattgatagtgggaaaaaaaaatccaaaggcgtc
aaaaaggaagagaacgaatgcagtaaagagggcaaaaaaggtcctaaaaggtcattcgag
cgaaaacgaaggtcacagaaagaaaaggcaaagcccaaggaagagttttcctccagtgat
gaagaggaagaggaggagaaggaggaaaagcaggctgataactcagatgaagacagtgat
cagcagaagattaaaccaatacttgagtccgttatggctagtattgatggtttccatcag
tcatcaggtgatgaagttgaattaaaggctgaatcctctcaggtggtggatgatgacgat
gaccctgagaatagaattgccaagaggatgcttttggcacagatcaaagccaactattca
tctggagctgacagttcatctgatgatgaaaacgcagacaaagaggatggggattcgaca
aagaaaggaaaatctggtgcaaagaagcaagaaggaagtgaaaaagaggaagaggatgaa
acttcagactcgggctcagatgttgacgtgaagaaaggtggacgcaggcaccgtttgttg
cgtaagaaattgactctaagtgaaggtgactctgatgacgagactccagtcaaaaacaag
aaagaaaccaaaaagagaggcaggcggaaagtggacagcgacgattcggcagactcggac
tttgagcagtcgcactcgggctccagtgatgcgtcagtgctcagcgaggctgtgagtgaa
gacgcggaggaaaacaagagcaataaacgcaaaacacggtcgtccagaaaagcagccaaa
gatggtgagagaagttaccagaaagagaagaaaaaacgacgtcgcattaaggttcaggac
tcctcatccagcggcaagagtggagaggaagaggatggagatggtgatggtgaaggggat
gacaaaggaacacccaaaaatcgcaagaagatccgcaagatcattaaagatgacaatctg
cggacagagacccgagatgctctgaaagaggaagaggagaggaggaaacgcattgctgag
agggagcggttgagggagaaactacgagagactattgtggtggaggagtcatcacaggtc
acgtgtcccatcaccacaaaactggtgctcgatgaggatgaggagaccaaggagccacta
gtgcaggttcacaggaacctggtgaccaaacttaaaccccatcaggttgatggtgtgcag
tttgtgtgggactgctgctgtgagtcagtgaagaaagtagagaagtcttctggttctggc
tgtattctggcccactgcatgggtctgggcaaaaccctccaggtggtgacatttctccac
actgtgctgctgtgcgagaaactgaacttcagcacagctctggtggtgtgtccactcaac
actgtgctcaactggctcaatgagtttgagaagtggcaagaaggcttgaaggacgaggag
agtttagaggttaccgagctggccacagtgaagagacctcaggagagagcgtacgcttta
cagcgctggcaagaagatggtggcgtcatgatcataggctacgagatgtaccgcaacctc
acgcaaggacgaaacatcaagagcaagaagctgaaagaaacctttcagaaaactctagtt
gatccaggtccagattttgtcatctgtgatgagggtcacatcctgaagaacgaagcatct
gctgtttccaaagccatgaactccatcaagactcgtcggcgggtggtgctgacgggaact
ccactgcagaacaacctgatcgagtatcactgtatggtgaacttcattaaggagaacctg
ctgggatcagtgaaagagttcagaaaccgcttcatcaaccccattcagaatggtcagtgt
gccgactccacactcgctgatgttcgtgtcatgaagaaacgagcacacatcctctatgag
atgctggcaggatgtgtccaaagaagagattacactgcccttacaaaattcctgccacca
aaacatgagtatgtgttagcggttcggttaacacccattcagtgcaagctttatcgatac
tatctggatcactttacaggtgtcggttctgccttggagagtggaagaggtcgtgcggga
accaaactcttccaggatttccagatgctcagcagaatctggacccatccgtggtgcctc
cagctggactatatcagtaaagaaaacaagggatacttcgacgaggacagtatggaggag
ttcatagcctcagagacagaggagtcctccatgagtttgacctctgaagatgagaagccc
aaaaggaagaagaaacgaggcaaaggaaaagagcagagctcagacaagtctgacagtgat
gacctggaagtgattaaggagtggaacaccagctctcgtggtggaaaccctgaggggagg
aatagagcagagcctgtggaggaggttcgggctccgtccaactctggtcctggcagccca
tcaccggactggtacaaagagtttgtggtcgaggcagattctgaggtgctggaacattct
gggaaaatggttcttctttttgagatcctccgtatggctgaagaagtggaagataaagtg
ttggtgttcagccagtctctcatttctctggacctcatcgaggattttctggagttggca
ggcagagccaaagaggaagggaaactttcgccgtacaaaggtgagggcaagtggttcaga
aacattgactactatcgcctggatggttccacgaatgccatgaccaggaagaagtgggca
gaggaattcaatgacaccagtaatgttcggggtcgattgttcctcatctcaaccagagct
ggttctcttgggatcaacttggtagctgcaaatagagtcataatttttgatgcctcatgg
aacccatcctatgacattcagagtattttcagagtctatcgctttggtcaagtgaagact
gtgtttgtctacaggtttttggctcagggaaccatggaggagaagatctatgaccggcag
gtcaccaaacagtcgctgtccttcagagttgttgaccaacagcagattgaacgtcacttt
acgatgaatgaactgacagagctctacacatttgagcccgaccagctggatgatccctct
gagaagaagagcaagcgggccacacccatgctgcccaaggatcctgtcctggcagaactg
cttcacagttacaaagatcagatcgtcggctaccacgagcatgactctttgctggaccac
aaagaggaagaggccctgagtgaggaagatcgcaaggcagcctgggccgaatacgaggcc
gagaagaagggtctgtccatgcgtttcaaccagccgtcctattctcaaatgggcgtggga
tcagcaccaaactcctacttccccttcaacgtggctgcattagcctccatgagcaaccaa
cagttggaggatttgattaaccagggcaggcagaaagtgttggaggccactagcgctctg
aagtcggtgcctagggaaccactggaggacatcatcgcacaggtgtggaaggagaatccg
agtttaccggaggcccaggttcaatccatggctcttgggaggcaggccggctttgagctg
gaaatcaaacacagggaggctgtttatcgtgatgtcctcagcaagcaacaaactctgatg
atgtacgtgcagaaggtgatcgccaaccggaaggtccaggagcagcagatggccctggcg
agacagggtatgctgctcaaccagttggccatgcagaatggtctcgcggctcctatgaat
cagatggacctgctcgggttgtaccagcagcttggggcgctccagggcctcccctcatca
cagctgggcaagaacccgggcccttctaagggactgtag |
|---|
