Entry |
|
Name |
(RefSeq) E3 ubiquitin-protein ligase TRIM58-like
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KO |
|
Organism |
cery Chanodichthys erythropterus (predatory carp)
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Pathway |
cery04622 | RIG-I-like receptor signaling pathway |
|
Brite |
KEGG Orthology (KO) [BR:cery00001]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
137009757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:cery04121]
137009757
Enzymes [BR:cery01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137009757
Ubiquitin system [BR:cery04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
137009757
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
20:complement(4027362..4030597)
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AA seq |
541 aa
MSQSKPEERLALELSCPICLQLYRDPVALPCGHNYCLGCIQNAAHAEDSKSPKRCPECRE
EYGSPEVLPKNFKLSGIVDGFLAATSGGGLRGGPMVSCDQCLDDPVAAVKFCTRCEMSLC
PGHLKRHEERHRSVHVLVELPIERNGKRCPVHLKVTEYLCAQERLFLCSECLMEGSHQHH
EVQTFEVAKGEMMRILEELGKSVSDKLQMTETLLKSASEGPTDKAEDKLVARANILLENM
TSLISTYKSRMSTMMDDKLNSRDKSWQASLCDLQGCLHQLQEAQQCTRDVLNQSSEFLFI
QNYLGVEARVRQAANVTIPALPSQEPSNAKHLRSTLRTDAFHAEMSLLLECLHGIMNPLD
LTFNPATANPSLLLSNDLRTVKQCVGVKSSSSGDQSERFSSASQVMCTQGFSTGVHMWAV
EVGPGCAWSAGLCYKSIPRKGDHSRLGHNTSSWKLQWKSKKLMACHDSANVAVGDGLVMP
PKKVEVTLDYEGGTIAFHSSGQGGRKQHLHTFSCVFKDTVYPAFGLHSTSEDSWITLLSG
V |
NT seq |
1626 nt +upstreamnt +downstreamnt
atgtctcaaagtaaacctgaggagcgtcttgctttggagttgagctgtccaatctgtttg
cagctgtaccgtgatcctgtagcccttccttgtggacacaattactgcctgggttgtata
caaaatgctgcccatgcagaagattccaagtccccgaaacgttgtcctgagtgcagagaa
gagtacggcagtccggaggtgcttccgaagaacttcaagctcagcggtatcgtggatggg
ttcctggcagccacttcaggcggtggattgagaggaggcccaatggtgtcatgtgaccag
tgcctggatgatccagtggctgcggtgaaattctgcacacgctgtgaaatgtcactgtgc
cccggccacctcaagagacacgaggaacgacacagatcggtacacgtcttggtggaactg
cccatagaacggaacgggaagaggtgcccagtgcacttgaaggtgacggagtacctgtgt
gcacaggaacgactgttcctctgctcagagtgcctgatggagggcagtcaccagcaccac
gaggtgcagacatttgaggtggcaaagggagaaatgatgaggattcttgaggaactgggg
aagtctgtgtctgacaagctacagatgacagaaactctcctgaaaagcgctagcgaagga
cctacggacaaggccgaagataaactggtggccagggcaaacatactgctggaaaacatg
acttcacttataagtacatacaagagtcgcatgagcaccatgatggacgacaaacttaat
tcgcgggacaaaagctggcaggccagtctatgtgatttgcagggttgtctacaccagctg
caagaagcccagcagtgcactcgtgatgttctcaatcaatcctcagagtttctcttcatc
cagaactacctcggcgttgaagcaagggtccgtcaggctgctaacgtcaccattcctgct
ctaccttcccaagagccctccaatgccaagcacctgcgttctaccctacgtacagacgcc
ttccacgccgagatgagtcttctgttggagtgcctccatggcataatgaaccctctagac
ctaaccttcaacccagccacagccaatcccagccttctgctgtccaatgatctcaggaca
gtcaagcagtgtgttggagttaagagcagtagctctggagatcagagtgagcgcttctcc
tcggccagtcaagtcatgtgcacgcagggtttctccacaggagttcacatgtgggcggtg
gaggtcggccctgggtgtgcgtggtctgcgggactgtgctataaaagcatcccacgtaaa
ggtgaccatagcaggctggggcataacaccagttcttggaagttgcagtggaaaagcaag
aagctgatggcatgccatgactcggctaatgtggctgtaggtgacgggctggtcatgccg
ccaaagaaggtcgaagtgaccctggattacgaaggtggaactattgccttccacagctca
ggtcaaggaggccgaaagcagcatcttcatacattcagttgcgtgttcaaggacacggtg
tatcctgcgtttgggctacactctacctcagaagattcatggataactcttttgagtgga
gtttga |