Chanodichthys erythropterus (predatory carp): 137009757
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Entry
137009757 CDS
T10334
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM58-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
137009757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cery04121
]
137009757
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137009757
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
137009757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-B_box
zf-RING_2
zf-RING_5
zf-C3HC4_2
RING_XB3-XBAT31
U-box
zf-ANAPC11
zf-B_box_ZFPL1
zf-UBR
zf_RING_Vps8
DUF4667
DUF1989
Motif
Other DBs
NCBI-GeneID:
137009757
NCBI-ProteinID:
XP_067228341
LinkDB
All DBs
Position
20:complement(4027362..4030597)
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AA seq
541 aa
AA seq
DB search
MSQSKPEERLALELSCPICLQLYRDPVALPCGHNYCLGCIQNAAHAEDSKSPKRCPECRE
EYGSPEVLPKNFKLSGIVDGFLAATSGGGLRGGPMVSCDQCLDDPVAAVKFCTRCEMSLC
PGHLKRHEERHRSVHVLVELPIERNGKRCPVHLKVTEYLCAQERLFLCSECLMEGSHQHH
EVQTFEVAKGEMMRILEELGKSVSDKLQMTETLLKSASEGPTDKAEDKLVARANILLENM
TSLISTYKSRMSTMMDDKLNSRDKSWQASLCDLQGCLHQLQEAQQCTRDVLNQSSEFLFI
QNYLGVEARVRQAANVTIPALPSQEPSNAKHLRSTLRTDAFHAEMSLLLECLHGIMNPLD
LTFNPATANPSLLLSNDLRTVKQCVGVKSSSSGDQSERFSSASQVMCTQGFSTGVHMWAV
EVGPGCAWSAGLCYKSIPRKGDHSRLGHNTSSWKLQWKSKKLMACHDSANVAVGDGLVMP
PKKVEVTLDYEGGTIAFHSSGQGGRKQHLHTFSCVFKDTVYPAFGLHSTSEDSWITLLSG
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaagtaaacctgaggagcgtcttgctttggagttgagctgtccaatctgtttg
cagctgtaccgtgatcctgtagcccttccttgtggacacaattactgcctgggttgtata
caaaatgctgcccatgcagaagattccaagtccccgaaacgttgtcctgagtgcagagaa
gagtacggcagtccggaggtgcttccgaagaacttcaagctcagcggtatcgtggatggg
ttcctggcagccacttcaggcggtggattgagaggaggcccaatggtgtcatgtgaccag
tgcctggatgatccagtggctgcggtgaaattctgcacacgctgtgaaatgtcactgtgc
cccggccacctcaagagacacgaggaacgacacagatcggtacacgtcttggtggaactg
cccatagaacggaacgggaagaggtgcccagtgcacttgaaggtgacggagtacctgtgt
gcacaggaacgactgttcctctgctcagagtgcctgatggagggcagtcaccagcaccac
gaggtgcagacatttgaggtggcaaagggagaaatgatgaggattcttgaggaactgggg
aagtctgtgtctgacaagctacagatgacagaaactctcctgaaaagcgctagcgaagga
cctacggacaaggccgaagataaactggtggccagggcaaacatactgctggaaaacatg
acttcacttataagtacatacaagagtcgcatgagcaccatgatggacgacaaacttaat
tcgcgggacaaaagctggcaggccagtctatgtgatttgcagggttgtctacaccagctg
caagaagcccagcagtgcactcgtgatgttctcaatcaatcctcagagtttctcttcatc
cagaactacctcggcgttgaagcaagggtccgtcaggctgctaacgtcaccattcctgct
ctaccttcccaagagccctccaatgccaagcacctgcgttctaccctacgtacagacgcc
ttccacgccgagatgagtcttctgttggagtgcctccatggcataatgaaccctctagac
ctaaccttcaacccagccacagccaatcccagccttctgctgtccaatgatctcaggaca
gtcaagcagtgtgttggagttaagagcagtagctctggagatcagagtgagcgcttctcc
tcggccagtcaagtcatgtgcacgcagggtttctccacaggagttcacatgtgggcggtg
gaggtcggccctgggtgtgcgtggtctgcgggactgtgctataaaagcatcccacgtaaa
ggtgaccatagcaggctggggcataacaccagttcttggaagttgcagtggaaaagcaag
aagctgatggcatgccatgactcggctaatgtggctgtaggtgacgggctggtcatgccg
ccaaagaaggtcgaagtgaccctggattacgaaggtggaactattgccttccacagctca
ggtcaaggaggccgaaagcagcatcttcatacattcagttgcgtgttcaaggacacggtg
tatcctgcgtttgggctacactctacctcagaagattcatggataactcttttgagtgga
gtttga
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