Chanodichthys erythropterus (predatory carp): 137010525
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Entry
137010525 CDS
T10334
Symbol
chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cery03036
]
137010525 (chd6)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
137010525 (chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
CHDCT2
DEAD
HDA2-3
HTH_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
137010525
NCBI-ProteinID:
XP_067228690
LinkDB
All DBs
Position
21:complement(32752674..32798747)
Genome browser
AA seq
2968 aa
AA seq
DB search
MSGAGVSRRRHKDQETMKIQKKDKQMSAAHVLKHTPSAAASNVSDQNAQTTFPIGHLGKE
QLRIIGGPPNHCMAHTKAGSAASGHSLRPSSINSEEDDGGGGTRVKKKRRKKDKKESDWN
KDGESNAKPKRREQKEGKELLPRKSKAVKEQKDHKREAKGQKEVKKVKKGQDVKVKSQPK
NTATHPPSKRGRKPKEQGAMPPEKKKKGKRKSDAVLEMVESDDTASLCTLATGGEESTDP
MDNTKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRIAAMSSSTLAWQAEEPPEDE
ANIIEKILSVRTVKKETSPDEPPEELEEFYVKYRNFSYLHCKWATLEELEKDPRIHQKIK
RFRNKQAQMKHIFTEPDEDLFNPDYIEVDRVLEIAITTDTETGEEVTHYLVKWCSLSYEE
STWELQEDVDPVKIREFEDLKKIPEIKQVERPLPEQWQKLEKSREYRNGNQLREYQLEGM
NWLLFNWYNRKNCILADEMGLGKTIQSITFLFEIFLMGLRGPFLIIAPLSTITNWEREFR
TWTEMNVIVYHGSQISRQMIMQYETYYRDEQGNILSGQFKFHGVITTFEMIMADCPELKK
INWRCVVIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPSQF
PSETTFLEEFGDLKTEEQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKK
YYRAILEKNFAFLAKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKILESFKKTYSSD
AVDFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQRRYTYERI
DGRVRGNLRQAAIDRFSKVDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQA
QARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSK
MEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVSS
GNRTDISLDDPNFWQKWAKIAELEIDSKAEKESLVIDTPRVRKQTRHYNSFEDDELMEFS
ELDSDSEERPCRTRRLSDRNRRYLRAECFRVEKNLLIFGWGRWKDILNHGRFKWHLSERD
MEVLCRALLVYCVRHYKGDDKIKSFIWDLITPTKDGHNQALQNHSGLSAPVPRGRKGKKL
KNQLSPPELKNADWLVHCNPEVVLQDDSYKKHLKQHCNKVLLRVRMLYYLKVEVLGEAAD
QALEGIPASKLEVTLPDIDYIEIPTIWWDAEADKSLLIGVHKHGYERYNAMRADPALCFL
ERVGMPDVTALTVEQGGAETASDAPDSISKSDEIKEENDMKSEELEEKVEIKEEPMSEET
GKNDTTVTGGFVASLAGDLITEMMEQGRIQWPAGSALTARLRRLITAYQRYTRREPLRHD
FLLHDGIAPVAWQIGEFRHCTTEPDPLFLEWQRRWTRREQADFYRTVSSFGVVYDPEKKT
FDWGQFRALARLERKTDESLERYFHSFVSMCRTACRLPPRKDEGTVDPSLLVEPITEERA
ARTLYRIELLRKVREQVLRHPLLGSRLQLCRPSLYLPVWWECGKHDRDLLIGVAKHGLSR
TDFYILNDPQLSFLEAHRNYVHKENHRYPVPGLPHHHCCLYDANLGHCQSPQPPEYHHTP
SPHTPTQLVHTHGHHQPTDVVASEPGSSLGIGTGNRDGFLDCPPLDDSLELGSLQHEGLT
SDTLHSKSGKEAFNGFPFNSATGGQNMLNSYGVQGELNGAQGDMADSIAGKLRSDVLVGE
QGSSEETGLMAPSVELDELQTPWESSDHVETSDMFNETDPILGAQALEPSFLDAPQPDDG
REGDETLTDCLSMPSSDSQSNPVEPLAPSFMLFKDLNVGETSVDQTDLSASLPEFVPPPL
GLPDVSLDQADPISEDQEDKLSDSNITHGVPSPGEGAESIGFHFEKEDLSPDSSKTKDSQ
DEIDKMPSIESPRENCFEESQKGDCKVTFDDSNEGDLKDPCEVALEESYVKPLREPEKVP
LEESYDLTCDETLQEPCEGFHQDAAEQHLVEEPSEESCKELSEPIEECNLTNTTLSTDYP
LPSSLPSSPTTLPDTSVSPVLDAVPKQEFLMDPVVSDVKPEPDSTTQTPHLEQTEVLDVK
DKIKDEGAKTPALLGDVDAPRFALPMCEMADNVHEIREPTIAQLLQEKALFSFSEWPKDR
VIINRIDSICHTILKGKWPSSSQQYESPTALANTCMPSSAHQRAGFLPTRMPISQSLNFN
LPHTVSHLPKERLVAPAFLPELKRPRRGFEFEAEVLAKPSHLGEKIQVAVPHRANTLLLN
GWQDTAIDLSKPTELTVGGDSGPISHMSHTVQSAPHKITGIGSIQGSLGLDMAGILQAGL
IHPVTGQIVNGSLRRDDSMLRRRRGRRRNVETPDLSFMKGRAMNLPEQQCGSESISQPVV
SSTSSQSECPPSTPTTLPTHPPAPSPAPSPASEALNVSVDREAANKGLMEWLRQNPNYNM
ELSAFPSSQNVSMLHSFLERPKQRRHRCKDPTKLDVSSLTGEERVPVVHRNTGRRLGGAM
APAIKELSRWLDANSEYSVAPDWADVVKHSGFLPEGKFTRILTGPVCRDPGPRRRGRRPR
SEMPKAPELPSGMGPLFMNGGLISSMDLVSLPNLRNVPGIPLTGIMGFPHGFATAVSSGD
DAKNGLGMLPMMLHGMAAVQPPMYSAHMSGMMSQSLSTATSTTSTATASSTTASVTSTNS
ATVTSTSSPADSSDTVPQQDNASSPMSTENWNKEDTKQGGEEKKVSASVSTAAATSSSSS
SITSTGSHLTFNPFLIPGMSHSLLYPHMFLPPGSIMALPAMPAADSTGSPKRKRKKVREE
GPVEGSGNVGVQMDGEESKGVKVEQTPERKSQEGGMEEDGHDVNLALVKDPSDHIKDPSE
DKSTEEKEKNEMGEEPEQDAQGPCDGGD
NT seq
8907 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagccggcgtgtccagacgcagacacaaagatcaagaaacaatgaaaatacaa
aagaaagacaagcagatgtctgccgcccatgtactaaagcacactccatccgctgctgcc
tcgaatgtctctgaccaaaacgcacaaactacatttcccatcggccacttgggcaaagaa
cagttacggattatcggagggccgcccaatcattgcatggctcacacaaaggcagggtct
gctgccagcggtcacagtctccgcccttcatcaatcaacagtgaggaggatgatggaggg
ggtgggaccagggtgaagaagaaacgaaggaaaaaagacaagaaagagtccgactggaac
aaagatggagagagcaatgctaaaccaaagagaagggagcaaaaggaagggaaggagctt
cttccaagaaagtcaaaggcggtgaaggaacaaaaggatcataagagggaggcgaaaggt
caaaaggaggtcaagaaggtcaagaaaggtcaagatgtgaaagtgaaatcacagcccaag
aacactgcaacacatccaccctccaaaagagggaggaagccaaaagagcagggtgccatg
cctccggagaagaagaagaagggaaagaggaaaagtgatgctgtacttgagatggtggag
agtgatgacacagcctctctctgcacgctcgccaccggcggtgaggaaagcaccgaccct
atggataacactaagaggcgatcagggcgtcaagtgaagcggcggaagtacaacgaagat
cttgatttcaaggttgtggatgatgacggggagaccattgctgtgttgggcgcgggccga
atcgccgccatgtcttcctctactctcgcctggcaggccgaggaaccccctgaagatgag
gctaatattattgagaaaatactctccgtgcgaacggtcaagaaagagacatcccctgat
gaaccaccagaagagttggaggagttttacgtcaagtacagaaatttctcctatctgcac
tgtaaatgggcgaccttggaggaactggagaaggacccacgcattcaccaaaaaatcaag
cgcttcagaaacaagcaggcgcaaatgaagcacattttcacagagccggatgaagacctc
tttaatccagattatattgaggttgatcgggttttagagattgctatcaccaccgataca
gaaacaggagaggaagttacacactacctggtgaaatggtgctctttgtcatatgaggag
agtacttgggagctacaggaagatgttgaccctgtgaaaatccgagagtttgaagacctc
aagaaaattccagaaattaaacaggtggaaaggcctctaccagaacagtggcaaaaactg
gagaagtccagagaatacaggaatgggaaccagctccgagaataccaattagagggaatg
aactggcttcttttcaactggtacaacaggaaaaactgtattctggctgatgagatgggg
ctggggaagaccatccagtccatcacgttcctctttgagattttcctcatgggtctgaga
ggacccttcctgatcattgccccgctctccaccatcaccaactgggagagagaattccgc
acatggactgaaatgaacgttattgtctatcacggcagtcaaatcagtcggcagatgatt
atgcagtatgagacgtactaccgagatgaacagggaaacatcctgtctggtcagtttaag
tttcatggcgtgatcactacatttgaaatgataatggctgactgtccggagctgaagaag
attaattggcgctgtgtggtgattgacgaggcccatcgcctaaaaaaccgcaactgtaaa
ctgctggaggggctcaaactcatgaacctggaacataaagtccttctcacaggaacccct
ttgcagaactcagtcgaggaactcttcagtctgcttaattttctcgagccctcacagttc
ccttctgagactacattcctggaggagttcggagacctaaagacggaggagcaggtaaag
aaactgcaagccattctgaagcccatgatgttgaggagactgaaggatgatgtggagaag
aatctggcccctaaagaggagacaatcatcgaggtggagctcactaacattcaaaagaaa
tactaccgcgccattctggagaaaaactttgcctttcttgccaagggagcgaaccagcac
aacatgcccaacctcatcaacacaatgatggagcttcgcaagtgctgcaatcacccatat
ctcattacaggcgctgaagaaaagattcttgagagcttcaagaaaacctacagttctgac
gctgtggattttcagctgcaggcaatgatccaggccgctggtaaactagtgcttattgac
aagttgctgcccaaactgctggccggaggacataaagtactggtattttcccagatggtt
cgatgccttgatatactggaggactacctcattcagaggaggtatacatacgaacggatt
gatgggagagttcgagggaatctacggcaggctgccatcgatcgattcagtaaggtggac
tcagaccgattcgtgttcctcctctgtacacgagcaggaggtctaggcatcaacctcact
gctgccgacacctgtatcatattcgactcagactggaatccgcagaacgacttgcaggct
caagctcgctgccaccggatcggtcaaagcaaagcagtgaaagtgtatcgacttatcacg
cgaaactcatacgagagggagatgtttgacaaggccagtctgaaactgggattggacaag
gctgttctgcaagacatcaaccgcaagggcagtctcaatggggttcagcaactgtctaag
atggaggtagaagatcttctcaggaagggggcttatggggccctcatggatgaggaagat
gagggctctaaattttgcgaggaggatattgatcagatcctgcagcgacgcacacagacc
atcacaatccagtctgaggggaagggatcaacttttgccaaggctagctttgtgtcttca
gggaaccgtacagacatctctctggatgatccaaacttctggcagaagtgggccaaaatt
gctgaactggaaattgactccaaggcagaaaaggagagtctggtgatcgacacacctcgc
gtacggaagcagacacgtcactataattcatttgaggacgatgaactgatggagttctct
gaactggatagcgactcagaagaacgtccctgtcgcacaagacgtctcagcgatcgcaac
agacgctacctccgagcagagtgcttcagagtggagaaaaaccttcttatttttgggtgg
ggtcgctggaaggatattctcaatcatgggcgttttaaatggcacctgtcggagcgagac
atggaggtgctgtgcagggctcttctggtctactgtgttcgccattataaaggagacgac
aaaattaagagcttcatctgggatctgatcacacccactaaagacggacataatcaagca
ctgcaaaaccactcaggtctgtctgctcctgtcccacggggtcgtaaaggcaagaagctg
aagaaccagttgagtccacctgagctgaagaatgccgactggctggtccactgtaaccca
gaggtcgtgcttcaggatgacagctacaagaaacacctcaaacaacactgcaacaaggtg
ctactgagggtgcggatgctgtactatctgaaggttgaagtgctgggggaggctgctgat
caggctcttgaagggatcccagccagtaaactggaggtaacactgcctgatatcgactac
attgagatccctactatatggtgggatgctgaggcagataaatcgctgcttattggagtt
cacaaacatgggtatgagcggtataatgccatgcgtgcagaccctgctctgtgcttcttg
gagcgggtgggaatgcctgatgtcactgcactgacggtagaacaaggtggagcagaaact
gcttcagatgcacctgatagtatcagcaagagtgatgaaattaaagaggaaaacgacatg
aagtctgaggaattagaagagaaagtagagatcaaggaggagcccatgtcagaagaaaca
gggaaaaatgacactacggtgacagggggctttgtagcatctctcgcaggagacctaatt
acagagatgatggaacaggggcggatacagtggccggcaggctcggctcttacagcacgt
ctacgccgcctcattactgcatatcagcgttacacacggcgtgagccgcttcgtcatgat
ttcctcttacacgatggaattgcacctgtggcatggcaaattggagagtttaggcactgc
acaactgagcctgacccgctctttttggagtggcaacgaaggtggacacgtcgtgaacaa
gctgacttctatcgcacagtgtcctcgtttggagtagtgtatgacccagagaagaaaacc
tttgactggggccagtttcgtgcccttgctcgattggagaggaagacagacgaaagcttg
gagagatatttccacagttttgtttcaatgtgtcgcactgcatgtagactacctcctaga
aaagatgaaggtaccgttgatccttcgctgttggtggaacccattacagaagagcgagct
gcccgaacattataccgtatcgagcttttgagaaaggtccgcgaacaagtattgcggcac
ccactcctggggtcacgactgcagctttgtcgccctagtctgtacttgcctgtctggtgg
gagtgtggcaaacacgaccgtgatcttctcattggtgtcgctaagcatggcttgagtcga
actgacttctacatcctcaatgacccacaactatccttcctggaggcccatcggaactat
gttcataaagaaaaccacagatatccagtcccaggcttgccccaccatcattgctgcttg
tatgatgccaacctcggacattgtcagtccccacaacctccggagtatcaccacacacct
tcaccccacacgccaacacaacttgtccatactcatgggcatcaccagcccacagatgtg
gtggcgtcagagccaggaagttccctggggataggtacaggaaacagagatggatttttg
gactgccctccattggatgactcattggagttggggtctttacaacatgaaggcttgaca
tcagacacactacatagcaaatctggtaaagaggccttcaatggattcccgttcaattct
gcaacaggtgggcagaatatgctaaattcatatggtgtgcaaggggagctaaatggggct
caaggagacatggcggactccatagctggaaaacttcgcagcgatgttctggtgggagag
caagggtcctcagaggagactggcttaatggctccttctgtggaactcgatgaacttcaa
actccatgggaaagctcagaccatgttgaaacttctgacatgttcaacgagactgatccc
attttgggagcacaagctttagaacccagctttctggatgctcctcagccagatgatgga
cgggagggtgatgaaacgctaaccgactgtttgagcatgcccagttcggactctcaaagc
aaccctgtcgagccactggcaccgagctttatgttgttcaaagaccttaatgttggagag
acatctgtggatcagacagatctatcagccagtcttccagaatttgttccaccacctctt
ggtctcccggatgtgagtcttgaccaggctgatcccattagcgaggatcaagaggacaag
cttagcgattccaacattacacatggcgttcccagtccaggagaaggagctgaaagcata
gggttccattttgagaaagaagacctttctccagacagttcgaagactaaggattctcaa
gatgaaattgacaagatgccttcaatagagtctccaagggaaaattgttttgaggaatcc
cagaaaggggactgcaaggtgacatttgatgattccaatgaaggagacttgaaagatcct
tgtgaagtggccttggaagaatcttacgtaaagcctctaagagagccagaaaaagtgcct
ttagaggagtcttatgatttgacttgtgacgagacactgcaggaaccttgtgaagggttt
catcaagacgcagctgaacagcacttagtggaagaaccctctgaagaatcctgcaaagaa
ctgtcagagccaatagaagagtgcaatctaactaacactaccctctcaacagattaccct
ttgccttcttcactcccatcatctccaactactttacctgacacctctgtatctccagtc
cttgatgcagtcccaaaacaagagttcctcatggatccagtggtttcagatgtgaagcct
gagccagacagcactacgcagacccctcaccttgagcagactgaggttttggatgtaaag
gacaagataaaagacgaaggtgcaaagacaccagcattattgggagatgttgatgcacca
cggtttgcgctgcccatgtgtgagatggcagacaatgtccatgaaataagggaaccaacc
attgctcagcttttacaggagaaagcactcttctccttctcagagtggcctaaggacagg
gtgatcatcaaccgtattgacagtatctgccataccatcttaaaggggaagtggccttcc
tctagtcaacagtacgagtctcccaccgcattggctaacacttgcatgcccagtagtgcc
caccagagggcaggatttctgcctaccagaatgcctatatctcagagccttaacttcaac
ctcccacacacagtatcccacttaccaaaggagaggttagttgccccagcatttctccct
gagctcaaacgtcccagacgtgggtttgaattcgaggcagaagttcttgccaaaccaagt
catcttggagaaaagattcaggttgccgtgcctcatcgtgctaacactctcctccttaat
ggctggcaagatactgctattgacctctccaaaccaacagagctaacagttggtggagac
agtgggccaatcagtcatatgagccacactgtccagtcagcgccccacaaaataaccggg
ataggctccatacaaggctcactgggattagatatggctggcattttgcaggctggtttg
attcaccctgtcacagggcagattgtcaacggcagtcttcgtcgtgatgattcaatgttg
agacggaggagaggacgaagaagaaatgtagagactcctgatctcagctttatgaaggga
cgagccatgaacttgcctgaacaacagtgtgggtcagagagcatcagccagcctgttgtg
tcctcaacatcctctcagtcagaatgccctccatccaccccaactacacttcctactcac
cctccagcaccctctccagctccttctccagcctcagaggccctgaatgtgagcgtggac
agggaagcggccaataaaggcctaatggaatggctcagacaaaaccccaactacaacatg
gagctttccgcttttccatcgtctcagaatgtgagcatgttgcacagtttcttggagcgt
ccaaagcagagaaggcatcgctgcaaagaccccaccaaactcgacgtcagctctctaact
ggagaggagagagtcccagtagtacacagaaacacaggccgcaggcttggaggcgctatg
gctccagccattaaagaactctcccgatggctggacgcaaattcagaatactctgtggct
cctgattgggcagacgtggtgaagcattcaggttttctaccggagggcaaattcacacgc
atcctcactggacctgtgtgtcgggatcccggtccacgcagaagaggcaggcgaccccgc
agcgagatgcccaaagcccccgagctcccctctggcatgggtcctctcttcatgaacggt
gggcttattagcagtatggatctggttagtttacccaatctccgcaatgtccctggcatc
ccgctaaccggtatcatgggctttcctcatggtttcgccactgccgtatcatcaggagat
gatgccaagaacggactcggcatgctgcccatgatgctccacggcatggcggccgtgcag
ccccctatgtatagcgctcacatgagtggaatgatgagtcagtcgctgtccacggcgaca
tccactacatccaccgcaaccgcatcctccactacagcgagcgtgacttctacgaactct
gcaaccgtaacctcaacctcaagcccggcggatagttcggatactgtacctcagcaggat
aacgcgagctctccgatgagcacggagaactggaataaggaggacacaaagcaaggaggg
gaagagaagaaagtgtctgcttcggtgtctacggctgcggccactagcagcagtagtagt
agcatcacaagcaccggcagccatttgacctttaacccctttctaatcccgggaatgtcg
catagtttgttgtatccgcatatgttcttgccaccaggcagtataatggcgctgcccgct
atgcctgcagcagacagcacgggcagccctaagagaaagaggaagaaggtcagggaggaa
ggaccggtggagggaagcgggaacgttggtgtgcagatggacggcgaggaatcgaagggg
gttaaagtcgaacagacacccgaacgaaagagccaagagggcggaatggaagaagatgga
catgatgtaaatttggctctggtcaaagatccttctgaccatataaaagatccttctgag
gataaaagtactgaagaaaaggaaaaaaacgaaatgggagaggaacctgagcaagatgct
caaggcccgtgtgacggtggagactag
DBGET
integrated database retrieval system
