Chanodichthys erythropterus (predatory carp): 137010619
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Entry
137010619 CDS
T10334
Symbol
ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cery03041
]
137010619 (ddx17)
Enzymes [BR:
cery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137010619 (ddx17)
Spliceosome [BR:
cery03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
137010619 (ddx17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
137010619
NCBI-ProteinID:
XP_067228852
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All DBs
Position
21:13493779..13505561
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AA seq
666 aa
AA seq
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MRGSSSYGDRDRDRGRDRGPRFGSSRVVQPPPKKFGNPGDRLRKKKWDLDQLPKFEKNFY
SEHPEVHHMSQYDVEEYRKRKEITVRGSGCPKPVTNFNQAQFPQYVMEVLLQQNFKEPTA
IQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLHDYVQ
INIGALELSANHNILQIVDVCMENEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDELTR
RMRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
NSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVDTGR
GGSGGGRMRYRGNNSSSNNPNLMYQDECERRMRSATGGNKGSRSNNFSRDGRSGGSSRDD
RLSSSSYRDRSRDGRNNYNSGPSYNSGGGDQYQSYGGGGGGQYGSRGGGSHPGVGGSGGA
GGQDQAGPPQGMFGAPPPTPPQPGPGPQPLMAQQFPPPPQPVIGFMGPGPYPFASPPPPL
PPPPRK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaagctcctcatatggagaccgagacagagatcgaggacgggacagagggcct
cgctttggatccagtcgagttgtccaacctccacctaagaagtttgggaatccaggagat
aggctgaggaagaagaaatgggacctggaccagctgcccaaatttgagaagaatttctac
agtgaacaccccgaggttcatcacatgagtcagtatgatgttgaagaatatcgcaagagg
aaagagatcactgtcagaggctctggctgtccaaagcctgttaccaacttcaatcaagct
cagtttcctcaatatgtgatggaagtgcttctgcagcagaactttaaagagcccactgca
atccaggctcaaggttttcctttggctctcagtggcagggacatggtgggcatcgctcag
actggctctggaaaaacactggcttatctgctgcctgccattgtgcacattaaccatcag
ccatacctagagagaggggatggccccatttgtcttgtgttggcacccacgcgtgaatta
gcccagcaggtgcaacaagtggcttatgactatggcaaatcatcccgaatcaagagtacc
tgtgtttatggtggagcccctaaaggtccacagatcagagatttagaaagaggtgttgaa
atctgcattgccacacctggccgtctgatagacttcctggaggcaggaaaaaccaaccta
cgccgttgcacctacctggtgctagatgaggctgatcgtatgttggacatgggttttgaa
ccccaaatccgcaaaattgttgaccaaattagacctgacagacagactctcatgtggagt
gctacctggcctaaagaagtgcgtcagctggctgaagatttcctccatgactatgtccaa
atcaatataggagctctagaactaagcgcaaaccacaacatcttgcaaatagtggatgtc
tgcatggaaaatgaaaaagacaacaagctgattcagctgatggaggaaatcatggctgaa
aaggagaacaaaaccataatctttgttgagacaaagaaacgttgtgatgaactgactcgt
aggatgcgaagagatgggtggcctgcaatgtgtattcatggtgacaagagccaaccagag
agggactgggtactatcagagtttcgcagtggaaaagctccaattttgatcgccactgac
gttgcatcacggggtctggatgtggaggatgttaaatttgtcatcaactatgactatcca
aactcttctgaggattatgttcatcgcattggccgcacagctcgcagcaccaacaaaggt
acagcctacaccttcttcacacctggaaaccttcggcaagctcgtgatctggttcgagtt
cttgaggaggctagacaggccatcaaccccaaactgctgcagctggtggacacaggtcgt
gggggaagtggaggtggaaggatgcgttaccgtggcaacaactcaagctcaaataacccc
aacctgatgtaccaggacgaatgtgaacgccgtatgcgctctgcaacggggggtaacaag
ggcagccgcagcaacaactttagccgtgatggaaggtcaggtgggagcagccgtgacgac
cgcttgtcttcgtcttcttacagagatcgcagtagggatggacgaaacaactacaactcg
gggccctcctataacagtggaggaggtgaccaataccagagctatgggggtggaggaggg
gggcagtatggctccagagggggaggctcacatccaggtgtaggtggtagtgggggagcc
ggagggcaagatcaagctgggcctccccaaggtatgtttggagcgccgcctccaactcct
cctcagcctgggccaggtccgcaaccactcatggcacaacagttccctcctccaccacag
cctgtcattggattcatgggtcctggcccatacccatttgcctcaccaccaccacccctt
cctccccctcccagaaagtag
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