Chanodichthys erythropterus (predatory carp): 137010988
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Entry
137010988 CDS
T10334
Symbol
tnrc6c2
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137010988 (tnrc6c2)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Gene silencing
piRNA pathway
137010988 (tnrc6c2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
RRM_1
UBA
RRM_occluded
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
137010988
NCBI-ProteinID:
XP_067229618
LinkDB
All DBs
Position
21:complement(14733050..14799238)
Genome browser
AA seq
1816 aa
AA seq
DB search
MEEKKKKKQEVETKKNTAEKTVTEQKTKVPDSVKPNPSIPSSPILSLNLPVPSASTTSNG
KRNPSNALQQQLPPLQQPSPRYAHREVPPRFRQQEQRQLLKRGQPLPTGALNLTSACTQS
GVISPPETPTSKRHTGLPHQSGLGAQNENCHWNIPVTKSSSGNQDKVIINHNNSEAWPSI
TYGKSQQTPECTLDAECTSEFVSNRSSTIMATGASQQGHYPISKASVNLTSSMVSSQGGP
TRGWVSEGKIDFPMGSRGQSSWGASNLNLNPSANPAAWPALGHEGPGVGSGPSSMVCSNS
LSLSMCGQGGVAPPHGTIGNGSIGCVNGNLVGDCAWGNPDTPEQHQSPTNVSFNMKPPNL
KTDGPNNTKPEPMSPVNSWRGNLSQSPTEPAIEDGTAFWGNRDAKNGETKESGWNSAGAS
SWGQGGASSGGGWGDWSKQPNTDGTGWDANDGPSQEHMSSWGPDTPASEGSRDSSEGHPR
RRERSSSDDLAPLLPRQDLDPRVLCNSGWGQTPVRQHTVWEMEESPDKKNDAGAEVWGSS
SSTPLTGPAPPPPGSVNPNLNAPPRMDTSKSEGSCRATPNSGWGGSVPASAQPNGGWGEP
PVNKKVPNGSVCGWGDSISEGLNTNGCNGQSWASEEKSSSWDDGTSQKKTKGWGDGPKTS
SGWGSSGSGNSGEWGDPSEIRKDGSGSNSRDPENRNWKETQKGWGKAAPAQGGGWGDAQH
SNGSAQGWGGKLQESTCGNSGAGGIGSWCGPNSVKQSNSGWASGGRQGPGDEVTGWEEPS
PSSIRRKMEIDDGTSTWGDPNAYCKSVNMWDRNNSQNHSGTSNNGSSNSLTGPNNNNNTN
HHQHHSQGPTQNHVNGSNNNGSPSQGESPLNRVPMGNPGWGELPNVQANPEPSSWGEPTN
SNPSVDNGTSAWGQPTKSCGRWGESAHDSSGPYGRGNAPAGSGPCQEGPKPMQDGWGSGG
EEISMNTSQWDADDGDMWNSPTSQDSSCNSWGQSKKGPQRGKVSNKQDDIWIMTRLIKQL
TDMGFPKDPAEEALKSNNMNLDQAMSALLEKKTELDKRGMGMSDYSNGMNRPMVCRPTNL
SKDPSLDRATFLDKDGRLSDDASTSPFMPSTGLKLPLANSSHPSHGLGGVSSGLSMQNLN
NRQMQNGMFGTNGAAQTRVMQQQAPPPQPPVPPLSSAQPTLRAQVPQLLTPQVQAQLLQF
AAKNIGLNPALLTSPINPQQMTLLYQLQQLQVAYQRLQIQQQMMQAQRNVSGSIKQQEQQ
VARTITNMQQQIQQHQRQLAQTLLMKQQQPPPSSHTGLHTNFGKASLDTFTGHPQTSGLS
VSDLQTKEQQSSPNSFSPYTLSGLNPNINVNCMEGGGLSLKDPPQPQSRLSQWTHSNSID
SMTASAQHMEANLNKHGAISAAQSHVPVGKSAMEDSFSPYNLMSSSESPTSTLVPPESWT
QGKSPNEKISSGSNINWPPEFCPGVPWKGLQNIDPENDPNMTPGSVPNGPTINTNIQDVN
RYLLRDRTGASSPSQSGTLSSSSEWSVSAYNSFGPSSQNERDADNPGKLLEMKSTWSSGP
ISHTQASLSHELWKVSPGTRNSSAPSRPPPGLTNTKPSSTWGGNSLGLSQGWTSSYSSEG
GTWSTDSPNRGSSWLVLRNLTPQIDGSTLRTLCMQHGPLITFHLNLTQGNAVVRYSSKEE
AAKAQKSLHMCVLGNTTILAEFAGEDDVNRFFAQGQSLTPTTSWQASPAPGSNQPRLGNP
AASHPTGLWSGGGGGTKIVCSTGNSSSGNGGDLLWGGVPQYSSLWAPPNGDDARVIGSPI
PINTLLPGDLLSGESM
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaagaagttgagacaaagaagaacactgcagagaaa
acggttactgaacagaaaaccaaagtgccagactctgttaaacccaatcccagcatccct
tcaagtcccattttgtccctgaacctgcctgtaccctctgcctccaccaccagcaatggc
aagcgtaaccctagtaatgccctacaacaacagttacctccattgcagcagcccagtcct
cgatatgcgcacagagaggttcctccacgcttccgacagcaggagcagaggcagctactg
aagaggggtcaacctttacctacaggcgctctgaacctgacctctgcttgcactcagtcc
ggggtcatctcccctcctgagacgcccaccagcaaacggcacacgggacttccccatcaa
agtggcctgggagcccagaatgagaattgtcactggaacatcccagtcaccaaaagcagc
agcggcaaccaggataaagtgattattaaccataacaactcagaagcttggccttccatt
acatacggcaagagccagcagacaccagaatgcaccttggacgctgaatgcacatcagag
tttgttagcaacagaagtagcactatcatggctacaggagctagccagcagggtcattac
ccaatcagcaaagccagcgttaatctcacttctagtatggtctctagtcaaggtggccct
accagagggtgggtctcagaaggaaagattgactttcccatgggcagtagagggcagtct
agctggggtgcctctaatctgaacctcaaccccagtgccaaccctgctgcttggccagct
cttggacatgaggggcctggggtagggtcaggccctagtagcatggtttgctcaaattca
ctttctcttagtatgtgtggccaaggaggagtggcgccacctcacggcaccattggaaat
ggtagcattggttgtgtcaatggaaaccttgtaggggactgtgcatggggcaacccggat
accccagaacagcaccagtctcccacaaatgtatctttcaacatgaaacctcctaacctt
aaaactgatggaccaaataacactaaaccagagccaatgagtccagtgaacagctggaga
ggaaaccttagtcagtcacctactgagcctgccattgaagatggaactgctttctggggc
aacagagatgccaaaaatggagaaacaaaggagtctggctggaattctgcaggggcctcc
tcttgggggcagggaggagctagcagtggtggtggctggggtgactggagcaaacagcca
aacactgacggtacagggtgggatgctaatgatggtccttcccaagaacatatgagttcc
tggggccctgatactccagcaagtgagggcagcagggatagtagtgagggccacccaaga
agaagagagaggtcctcaagtgatgatttggcccctttgttgccaaggcaggacttggac
ccacgtgtcctctgtaactcaggctggggacaaactccagttcgtcaacacactgtttgg
gaaatggaagaaagtccagacaaaaagaatgatgcaggggctgaggtctgggggtcttcc
tccagcacacctttaactggacctgcaccacctcctcctggatctgtcaatcccaacctc
aatgcacctcccagaatggacacaagcaagagcgagggatcttgcagagccacgccaaac
tcaggctggggaggatcggtcccagcctctgctcaacctaatggtggatggggggaacca
cctgtaaataaaaaggttcccaatggatcagtgtgtggctggggcgattccatttctgag
ggtctcaacaccaatggctgtaatggccaatcttgggcttctgaagaaaagtcttctagc
tgggatgatggtacttctcagaaaaaaacaaaaggttggggtgatggacccaaaacttcc
tcaggctggggaagtagtggcagtgggaatagtggagagtggggtgacccttcagaaata
cggaaggatggctctggaagtaactctagggaccctgaaaacagaaactggaaggaaacc
cagaaaggttggggtaaagcagcaccagcacagggtggtggttggggtgatgctcaacat
tccaatggttcagcccaaggttggggtggaaaacttcaggaatccacatgtggcaacagt
ggagctggaggcattggatcatggtgtggcccaaattctgtaaaacagagcaactctggc
tgggcatcaggaggacgccagggtccaggagatgaggtcacaggctgggaagaaccatct
ccatcttctattcgtcgcaaaatggaaattgatgatgggacctccacctggggtgacccc
aatgcttactgcaagagtgtgaacatgtgggacaggaataactcccaaaatcattcagga
accagcaacaatggcagcagtaatagcctcactgggccaaacaacaacaacaacaccaac
catcaccaacaccacagccaaggtcccactcagaaccatgtcaacggcagcaacaacaat
ggctcacccagtcaaggtgaatctcctcttaacagggtgcccatggggaacccaggctgg
ggagagctccctaatgtccaggcaaatccagaaccctcttcatggggtgagccaaccaat
tccaacccctctgtggacaatggcacttcagcttggggccagcccactaagagctgtgga
agatggggtgaaagtgcccatgactccagtggaccttatggcagaggaaatgcacctgct
ggatcaggcccctgtcaggaaggtcccaaacctatgcaagatggctggggatctggaggg
gaagagatcagcatgaataccagccaatgggatgctgatgatggtgacatgtggaacagt
cccacatcccaagactcctcttgtaactcctggggtcaatccaagaagggcccacaaagg
ggcaaggtctccaacaagcaggatgacatttggatcatgaccagacttatcaagcagctt
acagacatgggttttccaaaggatcctgcagaagaagccctgaagagcaacaatatgaat
ctggatcaggccatgagcgctttgttggagaagaaaactgaactggacaaacgggggatg
ggcatgtcggactacagtaatggaatgaataggcccatggtgtgccgacccacaaacctc
tccaaagacccctcactggatcgtgccaccttcctggacaaggatggcaggctgtcagat
gatgcttcaacctcaccgtttatgccttctactggcctcaagctcccactggccaatagc
agtcaccctagccatggattgggtggggtctcctctggcctgtccatgcaaaacttgaac
aacagacagatgcagaatggaatgtttggcactaacggagcagcacaaactcgggtcatg
cagcagcaggccccgccccctcagccaccagtgccacctcttagctccgcccagcctact
ctacgtgctcaagtgcctcagcttctcacccctcaggttcaagcacagctcttacagttt
gcggcaaaaaacattggtctgaatcctgcacttttaacctcaccaataaatcctcaacaa
atgaccctgctgtaccaactacaacaactgcaggtggcatatcagcgtttgcagattcag
cagcaaatgatgcaggctcagcgtaatgtctctggttccatcaaacaacaagagcagcaa
gttgcacgtacaatcacaaacatgcagcagcagatccagcagcaccagcgtcagctggcc
cagactctgcttatgaaacagcagcagcctccaccttcttctcacaccggcctgcacaca
aactttggtaaggcaagcctggacaccttcacgggtcaccctcagacttcaggcctctcc
gtctcagacctgcagaccaaagagcagcagtcttctccaaactccttcagcccttataca
ctctctggtttgaacccgaacattaatgtaaactgtatggaggggggaggtctatctctg
aaagaccctcctcagcctcaatcccgactctcacagtggactcattcaaattccatagat
tccatgacggctagtgctcagcacatggaggcaaacctcaataagcatggtgcaatctca
gctgctcagtcccatgttcctgtcggaaagagcgccatggaagattccttcagcccatac
aatctgatgtcaagctctgaatcccccaccagcaccttggtgcctccagagagctggaca
cagggcaaaagtcccaatgagaaaatttctagtggctccaatatcaactggcctccagaa
ttctgccctggggtgccatggaaaggtctgcagaacattgaccctgagaatgaccccaac
atgaccccaggaagtgttccaaatggccccaccatcaacaccaacatacaagatgtgaat
cgttacctgttacgtgacaggactggagcctcgtccccatctcagagtgggactctgtct
tcctcgagtgagtggtcggtcagtgcatataattcatttggtccatcctctcagaacgag
agggatgctgacaacccaggtaaactcttggagatgaagtctacctggtcctctggaccc
atctcccacacacaggcgtctttatctcatgagttatggaaggtttccccagggacacgt
aactccagtgctccctctcgcccccctccaggcctgaccaacaccaagccctcttctacc
tggggaggaaactcccttggcctcagccagggctggaccagctcttactcatctgaaggg
ggaacttggagcactgacagtcccaacagaggaagcagctggctggtgctgagaaacctc
actcctcagattgacggctccaccctacggactctgtgcatgcagcatggccctctcatt
accttccatctgaacctgacacagggcaatgctgtcgtacgttacagctccaaggaggag
gccgccaaagcccagaaatccctgcacatgtgtgtgctgggtaacactaccatcctggca
gagtttgccggtgaggacgatgtgaaccgcttctttgcacagggccagtcccttaccccc
accaccagctggcaggccagcccagcaccaggctccaatcaaccccggctgggcaaccct
gcagccagccaccccacaggcctctggagcgggggtggaggaggtactaagatagtctgc
agcaccgggaacagcagcagtggaaacggaggcgacctgctgtggggcggcgtgccgcag
tactccagtttatgggctcccccaaacggagacgatgccagggtaatcggcagccccatc
ccaattaacaccttgcttcccggagacctgctgagtggagagagcatgtag
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integrated database retrieval system
