Chanodichthys erythropterus (predatory carp): 137011140
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Entry
137011140 CDS
T10334
Symbol
sox21a
Name
(RefSeq) transcription factor Sox-21-A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137011140 (sox21a)
Transcription factors [BR:
cery03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
137011140 (sox21a)
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Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
137011140
NCBI-ProteinID:
XP_067229881
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Position
21:complement(7307563..7308599)
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AA seq
238 aa
AA seq
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MAKPMDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKTLIKKDRYHFNVTYNLGDSDPLKSARLPGDALTDSL
NAEKTSVAATRVFFSHHHLSANPYPFLDLSSKMTELPPAPFPHYSLLGYPGGVSAFPGMG
VLAGAPHAHPSPGNPGHMVPYNCLGWPGSGPVVPSSYVLLPGMTKAQHEPYLTYAATI
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctatggaccatgttaagcgtcctatgaacgcttttatggtgtggtcgaga
gcccagagacggaagatggcactggacaacccgaaaatgcacaactctgagatcagcaaa
cgcctcggaggcgaatggaagctcttgtcagactctgaaaaaagaccttttatcgacgaa
gccaaacgacttcgagccgttcacatgaaagaacacccggattacaaatacagaccgcgg
cgaaagcccaaaaccttgatcaaaaaagacaggtatcattttaatgtgacgtataatcta
ggtgacagcgacccgttgaaaagtgcgcggttacccggtgacgcgctcacggactcgctg
aacgcggagaaaacgtctgttgctgctactcgggtgtttttcagtcaccaccacctgtcc
gccaacccctatccgtttctcgacctgtcctccaaaatgacggaattaccgcctgcacct
ttcccacattattctttgctcgggtatcccggtggagtctccgcgtttcccggcatgggg
gttctggccggtgcgccacacgctcatccgtctccgggtaacccgggccacatggtgccc
tataactgcctgggctggccgggttctggacctgttgttccttcatcttacgtgctttta
ccaggaatgaccaaagctcagcatgaaccttacctgacttatgcagcaacgatatga
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