Chanodichthys erythropterus (predatory carp): 137011272
Help
Entry
137011272 CDS
T10334
Symbol
pdzrn3b
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137011272 (pdzrn3b)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
137011272 (pdzrn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137011272
NCBI-ProteinID:
XP_067230092
LinkDB
All DBs
Position
21:complement(28658786..28756340)
Genome browser
AA seq
1055 aa
AA seq
DB search
MGFELDRFKGAVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQSSCPVKCQRIS
TKELNHVLPLKNLILKLDIKCDNHARGCEKIVKLQHLAEHAEMCDYSPAKCRNKGCSEVL
NLKDMDAHMRESCDYRAVGICESGCGLMLTHKEQKLDNHCCLKALKTHNGALQGKVVCLD
KELKKQALKSTKREKSLLAQLSAVHNELQMTALKYQKKFTEYSARIDSLSKSISPPCKGG
ETKSVTAILHRESGSLGFNIVGGRPCADNKDGTSNEGIFVSKIVENGPADKEGGLQIHDR
IMEVNGKDLSKATHDQAVEAFRMAKEPIMVQVLRRAPRPKPTGPTGEAQVVDISTQTDIT
FQHIMALSKLPTSSPPVDVLEQYLLPEGHSPAHEYFDPNDFLEGMQHEIEREELEYEEVD
LYRTNIQDKLGLTVCYRTDDEDETGIYVSEIDPNSIAAKDGRIQKGDRIIQINGIEIQNR
EEAVALLTSEEHPNVCLLLARPEIQLDEGWMDDDRNDYLDDLHMDMLEQQHHQAMQFTAS
MLQQKKHEEDGGTTDTATLLSHHHEKDSGVGRTDDSTRNDESSEQENLADDQTSASTTLG
SRRMLAYSQDTLGSGDLPFSSESFISADYGDADFLGDFPADECERFRELLELKCQMRSTG
SSGTPDQSLFWPVGSVGGGQGGVGEEGVDKELELLNEELRSIELECLSIVRAHRMQQLRE
QCREQSWMLHNSGFRNYNTSVDARRHELADISELPEKSDKDSSSAYNTGESCRSTPLTLE
LSPDNSLRRGNENQAEAGASSGTSGGGRILKPLLSPVQEACSPSRGRPTLLKESEIGTQP
EVRERKAGRHAQPQSPYKHAHIPAHAQHYQSYMQLIQQKSVEYAQSQMSLVSMCRDPVAS
ADLGPKMEWKVKIRSDGTRYITKRPVRDKLLKERALRIREERSGMTTDDDAISEMKMGRY
WSKEERKQHAVRAKEQRQRREFMKQSRIDCLKEQGGSAEDKKELNIIELSHKKMMKKRNK
KIFDNWMTIQELLTHGTKSPDGTRVYNSLLSVTTV
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgagttggatcgattcaaaggggctgtggacccagacttcaaatgcaacttg
tgtaataaagttttggaggacccgctcactaccccgtgcggtcacgtcttctgcgctggc
tgtgtgctgccgtgggttgttcagcagagcagctgcccggtcaaatgccaaaggatctcc
accaaagagctgaaccacgtcctccctctcaaaaacttaatattaaagttagatattaaa
tgtgacaatcacgcgcggggctgcgagaagatcgtcaaacttcagcatctggcggagcac
gcggagatgtgcgattattcccctgccaaatgtaggaataagggctgcagcgaggtgctg
aaccttaaagatatggatgctcacatgcgtgaatcgtgtgattacagagcggtcgggata
tgcgagagtggatgcggattgatgctcactcataaggagcagaagttggacaaccactgc
tgtttgaaagccctcaaaacgcacaacggcgcgctgcaagggaaagttgtctgcttggat
aaggagctgaagaaacaagctctgaaatcgactaaaagagagaaatcacttttggctcaa
ctgtcggctgttcataacgagcttcagatgacagcgctgaagtatcagaagaaattcact
gaatacagcgccaggattgactcgctgtccaagagtatctctccaccgtgtaagggtgga
gagaccaaaagtgtcacggctatactccatcgtgagtctggatctttaggcttcaatatc
gttggaggaaggccatgtgcggataataaagatggcacttcgaatgaaggaatctttgtg
tcgaagattgtggagaatggaccggcggataaagaaggtggtttgcagatccatgacagg
ataatggaggtcaatggaaaggacttgtccaaggcgacgcacgaccaggcagtggaggcc
ttccgtatggctaaagagcccattatggtccaggtgctacgccgtgctcccaggcctaaa
cctaccggcccaactggggaagcgcaggtagtggacatcagcactcagacggacatcacc
ttccaacatatcatggccctcagcaagctgcctacgtcctccccgcctgtggatgtactt
gagcagtacctgctcccagagggacactctcctgctcatgaatacttcgaccccaatgat
ttccttgagggaatgcagcatgagatagaaagagaggagttggaatatgaggaagtggat
ttatacagaactaatatccaggataaactggggttaactgtgtgctacaggactgacgat
gaggatgagacggggatctatgtcagtgagattgatccgaacagcattgctgcaaaagat
ggacgaattcaaaagggagatcgaatcatccagatcaatggcattgagatccagaaccgt
gaggaagcagtggctcttttaaccagtgaagaacaccctaatgtgtgcctgctattggct
cgaccggagatacagctggatgaaggctggatggatgatgacagaaacgactacctggat
gacctccacatggatatgttggagcagcaacaccatcaagcaatgcagttcaccgcaagc
atgctccagcagaagaagcacgaggaagatggaggtacaacagacactgccacgctgctc
tcccaccaccatgagaaagacagtggagtgggccgcactgatgacagcactcgtaacgat
gagagttctgagcaagagaatcttgcggacgaccagaccagcgcctccaccacgctaggc
agccgtcgcatgctcgcctacagtcaggacaccctcggtagtggcgacctccccttcagc
agtgagtctttcatttccgcagactatggggatgccgacttcttgggtgactttcctgct
gacgaatgtgaacggtttcgtgaacttttggagctcaagtgccagatgcggagcacgggc
agcagtggtacaccagatcagagcttgttctggcccgttggcagtgtaggtggcggacag
ggtggcgtcggcgaggagggcgttgacaaagagctggagcttctgaacgaggagctccgc
agcattgagcttgagtgcctgagcatagtccgagcgcatcgcatgcagcagttgcgtgag
cagtgccgcgaacagtcctggatgctgcacaacagcggcttccgcaactacaacacgagc
gtggatgcaagacgccacgagctagcggacatcagcgaactcccagaaaagtctgacaag
gacagctccagcgcgtacaacacaggagagagttgccgtagcacgccgctcactctagag
ctctcgccggacaactccttgcggcgtggaaatgaaaatcaggcggaggcaggggcgagt
agcggtacatcgggcggcggcagaattcttaaacctctgctatcgcccgtccaagaggct
tgcagccccagcaggggtcgcccaaccttgttgaaagagtcggaaattggaacccagcct
gaagtcagagagcgcaaagcgggtcgccatgcccagccccagtcgccctacaaacacgcc
cacatcccagcccacgcccagcactaccagagctacatgcagctgatccagcaaaaatca
gtggagtacgcccaaagccagatgagcctagtcagcatgtgccgggaccccgtcgcttct
gccgacttgggacctaaaatggaatggaaagtgaagatccgcagtgacggtacacgctac
attaccaagcggcccgtccgggataagctcctgaaagagcgagccctacggatccgtgag
gagcgcagtgggatgactacagatgatgatgccatcagtgaaatgaagatgggtcgctac
tggagcaaagaggagcgcaagcagcacgccgttcgtgccaaagagcagcgccagcgcagg
gagtttatgaagcaaagccgtattgactgtctgaaggagcaaggaggcagtgccgaagac
aagaaggagctcaacatcattgaactaagtcacaaaaagatgatgaagaaacggaacaag
aaaattttcgacaattggatgactatccaggaactgttgacccatggtacaaagtccccc
gatgggacacgagtgtacaactccctactgtcagtgaccacggtgtag
DBGET
integrated database retrieval system
