Chanodichthys erythropterus (predatory carp): 137012057
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Entry
137012057 CDS
T10334
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137012057 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137012057 (nup54)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137012057 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
LPP
Motif
Other DBs
NCBI-GeneID:
137012057
NCBI-ProteinID:
XP_067231155
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All DBs
Position
22:36996949..37003366
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AA seq
523 aa
AA seq
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MAFNFGGASGSAGLSGTGFGAATTTSASTGFGFGSGSAGAFGGFGPTTTSAGAGTSFNFS
TPSNAGTSLFGNTQNKGFGFSSALGASAAPGTGFGALGGTGLGFGGFGGIQTNQNQQGVG
GLFSQQASQSSQLYNTASALSAPSVLSDERDSILAKWNQLQAFWGVGKGYFSSSAPPVEF
SQENPFCRFKAVGYSCVPGVKDEDGLVALALNKKEADVRSQQQQLVESLHRVLGGNQTLT
VNVEGVRALPDDQTEVIVYLVERSPNGTSKRVPASTLYNYMEQMNVKSQLQQLGVFMTVS
RTALTPAQLKQLLQNPPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLKIQDQMT
KQHQTRVDIISNDISELQRNQATTAAKITQYKRKLMDLSHRVLQVLIKQEVQRKSGYAIQ
LDEEHLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYRVDADLLREIK
QHLKHQQEGLSHLISVIKDDLNDIKTIEDGLHDSIHGRSSKLS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaacttcggcggcgcgtcaggcagcgctggtctttctggcactggctttgga
gccgcgaccacgacatccgcgtccacgggcttcggtttcggatccggtagcgcgggtgcg
ttcggaggattcggccccacgaccacctccgccggcgctgggaccagcttcaatttctcc
acgccgtcaaacgcaggtacgagtctcttcggaaacactcagaacaagggcttcggcttc
tcgtcggctctgggtgcgagtgcggcgccggggacgggattcggcgctctgggcggaacc
ggactggggttcggaggattcggggggatccagaccaatcagaaccaacaaggtgtaggt
gggctgttcagccagcaggcgtctcagtccagtcagctgtataacacggccagcgctctc
tccgccccgtcggtcctcagcgatgagcgcgactccattctggccaagtggaaccagctg
caggcgttctggggcgtggggaagggttacttcagcagcagcgccccgcccgtggagttc
agccaggagaaccccttctgccgcttcaaggcggtgggctacagctgtgttcccggtgtg
aaggatgaggatgggttagtggctctggctctcaataagaaggaagcagacgttcgctct
cagcagcagcagttggtggaatcgctgcacagggttctgggaggaaatcagacgctgacg
gtgaacgtggagggagtgcgagcgttacctgacgaccaaacggaggtgatcgtgtatctg
gtggagcgttctccgaacggcacgtccaagcgagttcccgcgtccacgctctacaactac
atggagcagatgaatgtgaagtctcagctgcagcagctgggcgtcttcatgaccgtcagt
cggaccgcgctgacgccggcgcagctcaagcagctgctgcagaacccgcccgcaggtgtg
gaccccatcatctgggaacaggccaaagtggacaatccagacccagagaagttgattcca
gtgcccatggtgggcttcaaagagctgctgcgcagactgaagatccaggatcagatgacc
aaacagcaccagacccgagtggacatcatctccaacgacatcagcgaactgcagagaaat
caggccacgaccgccgccaaaatcacacagtacaagcgcaagctcatggacctctcgcac
agagtcctgcaggtgctgattaaacaggaagttcagaggaagagcggttacgccatccaa
ctggatgaggagcatctgagagttcagctggacaccatccaatcagagctcaacgctccc
acacagttcaaggggcgactgaatgaactcatgtctcagattcggatgcagaatcatttc
ggagccgttcgttcagaggagcgttaccgtgttgatgccgacctgctgagagaaatcaaa
cagcatctgaagcatcagcaggagggtttgagtcacctgattagtgtcattaaagacgat
ctgaacgacatcaagacgatcgaagacggacttcacgacagcattcacgggcgcagcagc
aaactcagctga
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