Chanodichthys erythropterus (predatory carp): 137012365
Help
Entry
137012365 CDS
T10334
Symbol
irf1b
Name
(RefSeq) interferon regulatory factor 1b isoform X1
KO
K09444
interferon regulatory factor 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
137012365 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137012365 (irf1b)
Transcription factors [BR:
cery03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
137012365 (irf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
137012365
NCBI-ProteinID:
XP_067231625
LinkDB
All DBs
Position
22:complement(10663325..10665879)
Genome browser
AA seq
290 aa
AA seq
DB search
MPVSRMRMRPWLESRIDSNTIAGLVWVNKEEKMFSIPWKHAARHGWEVDKDACLFKQWAI
HTGKFREGVTTPDPKTWKANFRCAMNSLPDIEEVKDKSVNKGCGAVRVYRMLPAVSKKKD
KRPRGRDSRRRAKALPSHVKKEEARADEMQEPTIDSTILTDSPSPAMDTSDIPACEEVVG
PDSSSGLYTSRFQVSPMHSTDLEDYEAIIEISRQLERDSSQWLQSGAFAKGFLANEVGTS
ESLSPESQWSVSSGDELELRLYTELTPEESLCTYTELVNSSTFTPTICPL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtccagaatgcgcatgcgcccctggctggagagccggatcgactccaacacc
atcgctggactcgtgtgggtcaacaaggaggagaaaatgttctccatcccatggaaacac
gccgctcgtcacggctgggaggtggacaaagacgcgtgtctgttcaagcagtgggcgatc
cacacaggtaaattcagggagggagtgaccacacctgaccccaaaacctggaaagccaat
ttccgctgtgccatgaactcgctgccggacatcgaagaggtgaaggacaagagcgtcaac
aaaggctgcggcgcggtgcgagtctaccgcatgctgcccgccgtgagcaagaagaaagac
aagagaccccggggccgtgacagccggagacgggcgaaggctctgccttcacacgtcaag
aaggaggaagcgcgcgcggacgagatgcaggagcccaccatcgacagcaccatcctgaca
gactctcccagtcccgccatggacacctcagatattcccgcgtgcgaggaagtcgtcggc
ccggacagttcgagcggcctgtacaccagcaggttccaggtgtcgcccatgcattcgaca
gacttggaggattacgaagctatcattgagatctcacggcaattggaacgtgatagttca
cagtggctacaaagcggtgcctttgcaaaggggttcctggccaatgaagtaggcacatca
gagtctttgagtccagagagccagtggagtgtaagttcaggagacgagctcgagcttcgg
ctatacaccgaactgaccccggaggagtctctctgcacctacacagagctggtgaacagc
agcaccttcacaccgaccatatgtcctctctga
DBGET
integrated database retrieval system
