Chanodichthys erythropterus (predatory carp): 137012387
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Entry
137012387 CDS
T10334
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22 isoform X1
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137012387 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cery03041
]
137012387 (rbm22)
Spliceosome [BR:
cery03041
]
Complex B
Other components
Prp19-related factors
137012387 (rbm22)
Complex C
137012387 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
RRM_YTH1
zf-CCCH_4
zf-CCCH_10
RRM_PARP14_3
zf-CCCH_12
Calcipressin
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
137012387
NCBI-ProteinID:
XP_067231656
LinkDB
All DBs
Position
22:complement(29078468..29087992)
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AA seq
423 aa
AA seq
DB search
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAPSSGDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDVPEDKSITTLYIGGLG
ENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKSFNKLIINGRRLNV
KWGRSQAARGKEKDGVTESGIRLEPVPGLPGALPPPPVSDEDASTNYFNLAPTSSPAVMN
LGLPPPPGVAMPPPPGFGPPMFHTMDPMSPSMPPPMAMRPPGQVHYPSQDPQRMGAHASR
GGP
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctttaggatccaacacttataacaggcaaaactgggaggattcggatttt
cccatcctctgtcaaacatgcttgggagaaaacccttatatccgcatgaccaaagagaaa
tttggcaaagagtgcaagatctgtgcgcgtcccttcacggtgttccgctggtgtcctgga
gtcaggatgcgctttaagaagacagaagtgtgtcagacctgcagtaaaatgaagaatgtc
tgtcagacctgcctcctggatctggaatatggcttgcccattcaggttcgtgacactggg
ctgtccgttaaagatgaagtaccgagatcggatgtgaataaggagtattacactcaaaat
atggagagagagattgctaactctgatggcacaagacctgtggggcagcttgggaaggca
ccgagcagtggcgatatgctgctgaaactggctcgtaccacaccgtactataagaggaac
agacctcacatctgttccttttgggtgaaaggggagtgcaagagaggggaagagtgtccg
tacaggcatgaaaagcccaccgatccagatgacccactggctgatcagaacattaaggac
cgttactatggcattaatgatcctgtggctgataaactcttgaagcgggcctccactatg
cccagactggacgtacctgaagacaagtccatcaccacgctgtatatcggggggctggga
gaaaatgttacagactctgagctcaggaatcacttctaccagtttggggagattcgtacc
atcaccatcgttcaaaggcagcagtgtgctttcatccagttcgccacacggcaggccgca
gagacggctgcagagaagtcctttaataaactcatcattaatgggcgccggcttaatgtt
aaatggggcaggtcacaggcagctcgagggaaagagaaggatggggtgacggagagtgga
atcaggctggagccagtgccagggctccctggtgctctgcccccaccccctgtgtctgat
gaagatgcctccaccaactactttaacctggctccaaccagctcccctgctgtcatgaac
ctgggacttcctcctccacctggtgttgccatgcccccaccacctggttttggtcctcct
atgttccacaccatggatcccatgtccccttcaatgccccctccgatggctatgaggccc
cccggacaggtccactacccatcccaggatcctcagcggatgggcgctcatgcgagtcgt
ggaggcccctag
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