Chanodichthys erythropterus (predatory carp): 137012399
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Entry
137012399 CDS
T10334
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
137012399 (notch1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
NOD
Ank_4
Ank_3
Ank_5
cEGF
EGF_3
Gram_pos_anchor
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
137012399
NCBI-ProteinID:
XP_067231679
LinkDB
All DBs
Position
22:32349305..32385553
Genome browser
AA seq
2442 aa
AA seq
DB search
MNRFLVKLTLLTAASLATVSQGQRCSEYCQNGGICELKPSGEASCRCPADFVGPQCQFAN
PCSPSPCRNGGVCRARTQGNDVEVTCDCVLGYSDPLCLTPVNHACMSSPCRNGGTCSLLT
LDTFTCRCPPGWSGKTCQQADPCASNPCANGGQCSAFDSHYICTCPPNFHGQTCRQDVNE
CAISPSPCRNGGTCINEVGSYFCRCPPEYAGTHCERLYHPCHPSPCRNGGTCLQTSDTTY
ACTCLSGFTGQTCEHNVDDCTQHACENGGRCIDGVNTYNCHCDKHWTGQYCTDDVDECEL
SPNACQNGGTCHNTIGGFHCVCVNGWTGDDCSENIDDCASAACSQGATCHDRVASFFCEC
PHGRTGLLCHLDDACISNPCQKGSNCDTNPVSGKAICTCPPGYTGSACNQDIDECSLGAN
PCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECKSNPCQNDATCLDQIGGFHCICMPG
YEGVFCQINTDDCASQPCLNNGKCIDKINSFHCDCPKGFSGNLCQVDVDECASTPCKNGA
KCTDGPNKYTCECTPGFAGAHCELDINECVSSPCHYGVCRDGVAAFTCDCRPGYTGRLCE
TNINECLSQPCRNGGTCQDRENSYTCTCPKGTTGVNCEINIDDCKRKPCDYGKCIDKING
YECVCEPGYTGSMCNINIDDCALNPCHNGGTCIDGVNTFTCLCPEGFRDATCLSQHNECS
SNPCIHGNCLDQINSYTCMCEAGWMGRNCDININECLSNPCVNGGTCKDMTSGYVCTCRA
GFSGPNCQTNINECASNPCLNQGSCIDDVAGFKCNCMLPYTGEVCENVLAPCVQRPCKNG
GVCRESEDFLSFSCACPAGWQGQTCEVDINECVRNPCTNGGVCENLRGGYQCRCNPGFTG
DLCENDVDDCEPNPCSNGGVCQDRVNGFVCVCLAGFRGERCAEDIDECVSAPCRNGGNCT
DCVNSYTCSCPVGFSGINCEINTPDCTESSCFNGGTCVDGINTFSCVCLPGFTGNYCQHD
VNECDSRPCQNGGTCQDGYGTYKCTCPHGYTGLNCQSLVRWCDSSPCKNGGSCWQQGASF
TCQCASGWTGIYCDVPSVSCEVAAKQQGVSVVVLCRNAGQCVDVGNTHLCRCQAGYTGSY
CQEQVDECMPNPCQNGATCTDYLGGYSCECVPGYHGVNCSKEINECLSQPCQNGGTCIDL
INTYKCSCPRGTQGVHCEIDIDDCSPAVDPLTGEPRCFNGGRCVDRVGGYGCVCPPGFVG
ERCEGDVNECLSDPCDPNGSYNCVQLINDFRCECRTGYTGKRCETVFNGCKDTPCKNGGT
CAVASNTKHGYICKCQPGYSGSSCEYDAQSCGSLRCRNGATCVSGHLSPRCLCPPGFSGH
ECQTRMDSPCLTNPCYNGGTCQPINDAPFYRCSCPANFNGLLCHILDYSFNGGQGRDIAP
PPEVEIRCEIAQCEGRGGNAICDTQCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYFN
DGKCDEQCANAGCLYDGFDCQRLEGQCNPLYDQYCRDHYADGHCDQGCNNAECEWDGLDC
ADDVPQKLAVGSLVLVVHIPPDELCNRSSSFLRELSGLLHTNVVFRRSANGEPLIFPYYG
NEHELSKHKRSDWTDPAQLLQRARRSLTSFMKPRLRRELDQMEIKGSIVYLEIDNRQCYQ
QSDECFQSATDVAAFLGALASSGNLNVPYIIEAVTSEDGPSKTGEMYPMFLVLLALAVLA
LAAVGVVVSRKRKREHGQLWFPEGFKVTEPKKKRREPVGEDSVGLKPLKHSDSSLMDEQL
SEWAEDDTAKRFRFEEQSILDMTGQLDHRQWTQQHLDAADLRLNSMAPTPPQGEIENDCM
DVNVRGPDGFTPLMIASCSGGGVENENGEAEDDPSTDVITDFIYHGANLHNQTDRTGETA
LHLAARYARSDAAKRLLESCADANVQDNMGRTPLHAAVAADAQGVFQILIRNRATDLDAR
MHDGTTPLILATRLAVEGMVEELINCHADPNAIDDSGKSALHWAAAVNNVDAAVVLLKNG
ANKDLQNNKEETPLFLAAREGSYETAKVLLDHLANRDIADHLDQLPRDIAQERMHHDIVR
LLEEYNLVRSPPLPLSPPLCSPNTYLGIKPSPGSANNNNTAKKARKPGGKGVGGGKDGGK
DMRMKKKKNGEGKNGGMMEVGVLSPVDSLESPHGYLSDVSSPPMMTSPFQQSPPITLNQL
QGLADSHMGGALQNLGKPFDSAPPRLSHMPVANNGAQTAACDWLQRVQQQQQQAGFTQLI
PAMLPATSMPQVMGYPTMQTSHLSAASHMIPSHAHQNMPPMQHQNNALSHHFLGDLSGLD
LQSGSGHAPIQTILPQESQRMAPPISSTQFLTPPSQHSYSNPMDNTPSHQPQVPDHPFLT
PSPGSPDQWSSSSPHSNLSDWSEGISSPPTSMQMNHIPEAFK
NT seq
7329 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtttcttggtgaaattaacgctactgacggcagcatcgctcgcgacggtgtca
caagggcaaagatgctcagaatactgtcagaatggaggaatatgcgagctcaagccgagc
ggagaagcatcatgcaggtgtcctgcagacttcgttggcccccaatgtcagtttgcgaac
ccgtgcagcccgtcgccgtgtcgtaacggaggtgtttgccgcgcacggacgcaggggaat
gacgtggaggtgacctgcgactgcgtcttaggatacagtgatccgctctgtctgacaccc
gtcaatcatgcctgtatgagctccccgtgccgtaacggaggcacctgctctctgctcacg
ctcgacacctttacctgccgctgcccacctggatggtcaggtaaaacgtgccaacaggct
gacccgtgtgcgtcaaacccctgtgccaacggcggccagtgttcagcatttgactcgcac
tacatctgcacctgccctcctaacttccacggccagacgtgtcggcaagacgtgaacgaa
tgtgctatctctccctccccctgtcgtaacggaggcacatgcataaatgaggtgggctcg
tacttctgccggtgcccacctgagtacgctggcacacactgcgagcgcctgtaccacccg
tgccacccctcaccctgcaggaacggagggacctgcttacagaccagcgacaccacctat
gcctgcacttgtctgtcagggttcacgggtcaaacgtgcgagcataacgttgacgactgc
acccagcatgcctgtgagaatggaggcaggtgtatagacggcgtcaatacgtacaactgc
cattgcgacaaacactggaccggtcagtactgtacagatgacgtagatgagtgcgaactc
tcgcctaacgcttgtcagaacggaggaacgtgtcacaacaccatcggcgggttccactgt
gtgtgcgtgaacggatggacgggcgacgactgcagcgagaacatcgacgactgcgccagc
gctgcgtgttcccagggtgccacctgccacgatcgagttgcctctttcttctgcgagtgt
ccacatggccgcacaggtcttctgtgtcacctcgatgacgcctgcatcagtaatccatgt
cagaagggctcaaactgcgacacgaacccggtgagcggaaaagccatctgcacctgtccg
cccgggtacacaggatcagcctgcaaccaagacattgacgagtgctcgctcggtgcaaac
ccatgcgagcatggcggacgctgtctcaacactaaaggctccttccagtgcaagtgtctc
caaggttatgaaggcccgcgctgtgaaatggacgttaatgaatgcaagtctaacccctgc
cagaatgacgccacctgcctcgatcaaattggtggattccactgcatctgcatgccaggt
tacgagggtgtgttttgtcaaataaacaccgacgattgtgcatcacagccttgcctcaac
aatggaaaatgcattgacaagatcaactcgttccactgcgactgccccaaagggttctct
gggaatttatgtcaggtggatgtggatgagtgcgcaagcacaccgtgtaaaaacggcgct
aagtgcacagacggaccgaacaaatacacctgcgaatgcactccaggttttgctggcgct
cactgcgagttggacatcaacgagtgtgtgtcgagcccttgtcattacggcgtgtgtagg
gacggcgtggccgctttcacctgtgactgtcgccctggatacaccggccgcctgtgcgag
accaacataaacgagtgcttgagccaaccatgccgaaacggaggcacctgtcaggacaga
gagaactcgtacacctgtacctgccctaaaggaaccacaggtgtgaattgcgagataaac
atcgacgactgcaaaagaaaaccatgtgactatggaaagtgcattgacaagatcaacggc
tacgagtgtgtgtgtgaacccggatacacaggctcaatgtgcaacatcaacattgacgac
tgcgcgttaaacccctgtcataacggcggcacctgcatcgacggggtcaacaccttcacc
tgcctctgtccggagggtttccgtgacgccacctgcctgtctcagcacaacgagtgttcc
agcaacccctgtatccacggcaactgtctggaccagatcaacagctacacatgcatgtgc
gaggccggctggatgggacgcaactgcgacatcaacattaatgagtgtttgtccaatccg
tgcgtgaacggaggcacctgtaaggacatgaccagcggctacgtgtgcacctgcagagct
ggcttcagcggtcccaactgccagacgaacataaacgagtgcgcatccaacccctgccta
aaccagggctcctgtatcgacgatgtggccggattcaagtgcaactgcatgttgccttac
acaggcgaggtgtgtgagaacgttttggctccctgtgtgcagcgtccttgtaagaacgga
ggtgtgtgtcgtgaatcagaggattttcttagtttctcttgtgcttgtcctgctggatgg
caaggtcagacgtgtgaggtggacattaacgagtgtgtgaggaatccttgcactaacgga
ggggtgtgtgagaacctgcgcggtggataccagtgccgctgcaaccctggattcaccgga
gatctgtgcgagaacgacgttgacgactgcgagccaaatccatgcagtaacggcggtgtg
tgccaggaccgtgtgaacggctttgtgtgtgtgtgtttggctggtttccgtggggagcgc
tgtgcagaggacatagatgagtgcgtgagtgccccctgccgtaacggagggaactgcacc
gactgtgtcaacagctacacctgcagctgtcctgtaggattcagcggcatcaactgtgag
atcaacacaccggactgcactgagagctcgtgttttaatggcggaacgtgtgtggatggc
ataaacacgttctcatgcgtgtgtttgccgggatttaccgggaattactgccagcatgat
gttaacgagtgcgactcgcggccgtgccaaaacggaggcacctgtcaggacggatacggc
acctacaaatgcacctgcccgcacggatacaccggactcaactgccagagtctggtgcgc
tggtgtgactcctctccctgtaagaacggtggctcgtgttggcagcagggggcgtctttt
acatgccagtgtgccagtggctggacgggcatctactgtgacgtccctagtgtcagctgt
gaggtcgccgccaagcagcaaggagtgtctgtggtcgttctgtgtcgtaacgcgggtcag
tgtgttgacgtcggtaacacacacctgtgtagatgtcaagccggatacacgggcagctac
tgtcaggagcaggtggatgagtgcatgccgaacccctgccagaacggagccacctgcacc
gattacctgggaggatacagctgtgagtgtgttcctggatatcatggggtcaactgcagc
aaggagataaacgagtgtctgtctcaaccctgtcagaacggaggaacctgcatcgacctc
ataaacacatacaaatgctcctgtccacggggaacgcaaggtgtccactgtgagattgac
attgatgactgttccccggctgtggatccgttaaccggcgagccgcggtgctttaatggc
ggccgctgcgtggaccgtgtcggcgggtacggctgcgtgtgtccgcccggttttgtaggc
gagcgctgcgaaggcgacgttaatgagtgcctgtctgacccctgtgaccccaacggatcc
tacaactgtgtacaactcatcaacgacttccgatgcgagtgccgaacaggatacaccggc
aagcgctgtgaaactgtgttcaacggatgcaaggacacaccatgcaaaaatggaggaaca
tgtgctgtcgccagcaacaccaaacacggatacatctgcaagtgtcagccgggttactcc
ggctcctcctgcgaatatgatgctcagtcctgcggctccctgcgctgtcgcaatggtgct
acctgcgtctccggccacctgagtccccgctgtctctgtccgccgggcttcagtgggcac
gaatgccaaacacggatggactcgccgtgcctcaccaacccctgctacaacgggggcact
tgccagccgattaacgatgctccgttctaccgctgttcctgccccgccaacttcaacgga
ctcctttgccacatccttgactactccttcaatggcgggcagggccgggacatcgccccg
cccccggaggtggagattagatgtgaaatcgctcagtgtgaaggcaggggtggaaatgcc
atctgcgatacgcagtgtaacaatcacgcgtgcggatgggacggtggcgactgctctctg
aatttcgacgacccatggcagaactgtagcgccgccctgcagtgttggaggtacttcaat
gacggaaaatgtgacgagcagtgtgccaacgctggctgcctatatgatggattcgactgc
caaagactggagggacaatgcaatccactgtacgatcagtactgtagggatcactatgcg
gatggtcactgcgatcagggctgcaataacgcggagtgcgaatgggacggtcttgactgt
gccgatgacgttccacagaaactcgccgtgggaagtctggtactagtggtccacatccca
cccgatgaactatgcaaccgttcctcgtctttcctccgcgagctgagcggactgctgcat
acgaacgtcgtgttccgccgcagcgctaacggagagccactcattttcccatactatggc
aacgagcacgagctgagtaaacacaaacgctctgattggaccgaccccgcccagctgctg
cagcgagccaggaggagcctgacatcatttatgaagccccgcctacgacgagagctggat
caaatggagatcaaagggtctatcgtctatctcgaaattgacaaccgccagtgttatcag
cagtctgacgagtgtttccagagcgcgacagatgtggcagcattcctcggagcactggcc
tctagcgggaatctcaatgttccttacatcatcgaggctgtcacaagtgaggatgggcca
tcaaagacaggggagatgtaccccatgttcctggtgcttcttgctctggcggttttggcc
ctggcagcggtgggtgtcgtggtctccaggaagaggaagagggaacacgggcagctttgg
ttcccggaagggtttaaagtcaccgaacccaaaaagaagcgaagggaaccagtcggagag
gactctgtcggactcaagcctctgaaacactctgacagctctctgatggatgaacaactg
agcgaatgggcagaagacgacactgctaaacgattccggtttgaggagcagtccattctg
gacatgactggtcagctggatcaccgtcagtggacgcagcagcacctggacgccgctgac
ctgcgtttgaactctatggctccgacgccaccgcagggagagatcgagaacgactgcatg
gacgtcaacgtccgcgggcctgacggtttcactccactgatgattgcgtcgtgcagtggt
ggcggtgttgagaacgaaaacggcgaggcagaagacgatccgtccactgatgtcatcaca
gacttcatctaccacggtgccaacctgcacaatcagacggaccggacgggcgagaccgcc
ctgcacctggctgcccgctacgcccgttcggacgcggccaaacgcctgctggagtcgtgc
gccgatgctaatgtccaggataacatgggccgcacgcctctccatgctgccgtcgctgct
gatgcacagggtgttttccagattctcattcggaaccgagcgacggatctggacgcccgc
atgcatgatggaacaactccgctgatcctggctacccgattggctgtcgagggaatggtg
gaagagctcattaactgtcatgcagatccgaatgccattgatgattctggtaagtcggct
cttcactgggcggctgcggttaataacgtggacgctgctgtcgttcttttgaagaatgga
gcgaataaagacctacagaataacaaggaggaaacaccacttttcctggccgctcgtgag
ggcagttacgagaccgctaaagtcctgcttgatcacttggccaaccgtgacatcgcggat
cacctagaccagcttccacgcgacatcgcgcaggagcgcatgcaccacgacatcgtccgt
ctgttagaagaatacaacctggtccggagtcccccgctgcccttatcgccccctctctgc
tcgcccaacacctacctgggcatcaaacccagcccgggcagcgccaacaacaacaacacg
gccaagaaggcgaggaaaccgggaggtaaaggcgtgggaggagggaaggatggcggaaaa
gacatgagaatgaaaaagaaaaagaacggagagggcaaaaatggagggatgatggaagtg
ggcgtcctctcgcctgtcgattcgctggagtcgccccacggttacctgtcggacgtctcc
tccccacctatgatgacgtcaccctttcaacagtcccctcccatcactttgaatcaactc
caaggattggctgattctcacatgggcggagctcttcagaatttagggaagccgtttgac
tccgcccctccacgcttatcccatatgccagtggctaataatggagctcaaacagctgcg
tgtgattggctgcaaagggtgcaacagcaacaacagcaggcaggcttcacacagctgata
cccgcaatgctccctgccacctctatgccacaggtcatgggctatcctacgatgcaaact
agccacctcagcgcagcgtcgcatatgattcccagccacgcccaccagaatatgccgccc
atgcagcaccaaaacaacgccctctctcatcacttcctaggtgacctgagtggactggat
cttcagtctggctcaggacacgcccccatccagaccatcctgccgcaggagagccagcgc
atggctcctcccatttctagcacacagtttctgactccgccttctcaacatagttattcc
aaccccatggacaacacgcccagtcaccagccgcaggttcccgaccaccctttcctcacg
ccctctcctggctctcctgaccaatggtcaagctcgtctccacattccaacttgtctgat
tggtcagagggcatctcaagcccacccactagtatgcaaatgaaccatataccagaggcc
ttcaagtag
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integrated database retrieval system
