Chanodichthys erythropterus (predatory carp): 137012778
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Entry
137012778 CDS
T10334
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cery03009
]
137012778 (ddx52)
Enzymes [BR:
cery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137012778 (ddx52)
Ribosome biogenesis [BR:
cery03009
]
Eukaryotic type
90S particles
Helicases
137012778 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SNF2-rel_dom
Cas3-like_C_2
NCF1_PBR_AIR
Motif
Other DBs
NCBI-GeneID:
137012778
NCBI-ProteinID:
XP_067232317
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All DBs
Position
22:30523516..30533863
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AA seq
613 aa
AA seq
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MDAFDLFKKLGSGAKFDLKRFSKDAERFKVVKSQNKDSSQQLSGIRFFGTDTQEKTSPES
RLSEDDGEEGSDEEQASGKRKRTEVDEPVKAARKKKKGDKRKSEDTEPEKSEGEGIQWMS
SQDMVKDLKKKSKDKLSLKTLKQLHHEKVNQIRHQNRINVHGTDIPDPVSSFEELQKEYD
LDPRVIQNIKAAGFQTPTPIQMQAIPLMMHKREILACAPTGSGKTMAFCLPLLAHLRQPL
NKGFRALIISPTRELATQTHRELLKLSEGVGFRVHMINKGVNAVKKYGPKSAKKFDILVT
TPNRLIYLLKQDPPAINLSGVEWLVVDESDKLFEDGKTGFREQLATIFLACSSPKIRRVL
FSATFATDVEQWCKLNLDSLVSVNIGPRNSAVETVEQQLLFVGSENGKLLAMRNLIKQGF
LPPVLVFVQSIDRARELFHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLICTAL
LARGIDFKGVNLVINYDFPTSAVEYIHRIGRTGRAGHKGKAITFFTEDDKPLLRSIATVI
KRAGCPVPDYMIGFEKIQRKLKRQLAKHPPRRSTIRTTPRFLFEKKLGKGKRKKRKAAAK
EAKGEATEVISNS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctttgacttgtttaaaaagcttgggtctggagcaaagtttgatctcaaaagg
ttttctaaagatgcagagagatttaaggtagtgaaatctcagaacaaggacagctcacaa
cagctgtctggaatcaggttttttggcacagacacacaagagaaaacgtctccagagtcc
agactgagtgaagatgatggtgaagaagggagtgatgaagagcaggcctctgggaaacgg
aaacggactgaagtggatgagccagtgaaagcagcacggaagaaaaagaaaggagataag
agaaaatccgaagacacagaacctgaaaagagcgagggagaagggatccaatggatgtca
tcgcaagacatggtgaaagacctcaagaagaagtccaaagacaagctctctttgaaaaca
ctaaagcagcttcatcatgagaaggtgaatcagatacggcaccaaaaccggattaacgtg
catgggacagacattccagatcctgtttcctcttttgaggagctgcagaaggagtatgat
ctggacccacgagtcattcaaaacatcaaggcagcgggtttccaaaccccaacacccatt
cagatgcaggccattcctctcatgatgcataaaagggagatcctggcatgtgctcctaca
ggctccggtaagactatggccttctgtctgcccctgctggcccaccttcgccagcccctc
aacaagggtttcagagccctcatcatctcccccaccagagagctcgccactcagactcac
agagagttgctcaagctgtcagaaggagtgggcttcagagttcacatgatcaacaaagga
gttaatgctgtgaaaaaatatgggcccaagtcagcaaagaaatttgatatattggtgaca
actcctaacagattgatatatttattaaaacaagatcctcctgctatcaacttaagtggt
gtggagtggctggtggtggatgagtctgacaaactctttgaggatggtaagacgggtttc
agagagcagcttgccaccatcttcttggcctgctcttctcccaaaatccgccgggttctc
ttcagtgcaacctttgccacagatgtggagcaatggtgcaaactgaacctagacagcctc
gtgtctgtcaacattggacccagaaactctgcagttgagactgtggagcagcagttgctg
tttgtgggttcagaaaatggaaagctacttgccatgagaaaccttataaagcagggattt
ttgccaccagtgttggtctttgttcagtctattgaccgtgcccgagagctcttccacgag
ctggtgtacgagggaataaacgtggacgtgatccatgcggatcgtacacaacagcagagg
gacaatgttgtgagcagtttccgttcgggaaagatctgggtgttgatctgcactgctctg
ctggctcgtggaatcgacttcaagggcgtcaacctggtgatcaactacgactttcctacc
tctgctgttgagtacatccaccggatcgggcgaactggaagagcaggacacaaaggaaag
gcaataactttcttcacagaggatgacaaacctcttcttcgaagcattgctactgtcata
aagagggctggatgtcctgtccctgactacatgattgggttcgagaaaatccaacgcaaa
ttgaaacgtcagcttgcgaaacatccacccagacggtcaactattcgcacaacgcctcgc
tttctctttgaaaaaaagctcggcaagggaaaaaggaaaaaaagaaaagctgcagcaaaa
gaggcaaaaggtgaagcgacagaagtaatttctaacagctga
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