Chanodichthys erythropterus (predatory carp): 137012837
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Entry
137012837 CDS
T10334
Symbol
rnf180b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cery04121
]
137012837 (rnf180b)
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137012837 (rnf180b)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137012837 (rnf180b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
137012837
NCBI-ProteinID:
XP_067232412
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All DBs
Position
22:complement(21321751..21327609)
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AA seq
463 aa
AA seq
DB search
MATSLLVRHVLYNEEQDKSEDSTNLRCRKCRRCLIDSTSLLKVVTSSEAAAACSVWHLNV
ESLPDWILSSVGQVNWTVGKLNCQHCGARLGGFNFVNCSKCTCGHDTTVHLSKSRVDEDL
KPLVLLARQGRTREHTRRRKNEVESLPQTISSALSPSSTLNFSCPVSHVVSAETEFEVES
SEEPQILENVERVTDVSLTSELPLQLYDYRESLEEQHVGSASRSRTSQDRAVDPEDIRLM
EEPPRNILPNVEPKLLKREKNRLKSLRRKQRKKERWIQRQQEAKDLAMKWDLTGSDDEER
EGYTCAVCLDVYYSPYKCHPCCHVFCEPCLRTLAKNRPSNTPCPLCRTLISHVLFQEELS
QTTKTCFPKVYRSRHETFQKTNYSKWPLPNCPKRFRIFWGFQRHGGPASRWQFPHRAFGL
DALDLGDMWGWPFDIDFVIISIYSLHWVMAFIIFCGLCYFLLI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggctacctctctcctggtacggcatgttttatacaatgaagaacaggataaatcagaa
gattcaacaaaccttcgctgcagaaagtgccgcagatgtctaatagactcaaccagcctt
cttaaggtggtaacatcaagtgaagctgcagccgcatgcagtgtgtggcatttaaatgtt
gaatctttgccagattggattttgtcaagtgttggtcaggtcaattggactgtcgggaaa
ttaaactgccagcactgtggagctcgcttaggaggctttaattttgtaaattgctccaaa
tgcacctgtggacatgatacaactgtacatctcagtaaaagtcgtgttgatgaggatcta
aaacctctagttcttttagcaagacaaggaaggactagagaacatactagaaggaggaaa
aatgaggtggagtctctccctcagacaataagctcagcgctctctccttcctcaaccctc
aacttctcctgtcctgtatctcatgtagtctctgcagaaactgaatttgaggttgagtca
agtgaagaaccacagattcttgagaatgtcgagagagtcacagatgtttctttaacttct
gaattgccactacagctgtatgattatcgggagagcttagaggaacagcatgtgggttct
gcttcccggagtagaacttctcaggacagagcagtggatcccgaggacatcagactgatg
gaggagccacccagaaacatcttacccaatgtagagccaaagctcctcaagagagagaaa
aaccgcctgaaaagcctaagaaggaagcagaggaagaaggaacgctggattcagagacag
caggaggcaaaagatctggctatgaagtgggacctaacaggcagcgatgatgaggaaaga
gaaggatatacatgtgccgtgtgtttagacgtatattacagcccctacaagtgccatcct
tgctgtcatgtgttctgtgagccctgtttgagaactctggccaagaatcggccaagcaat
acaccatgtcctctctgtaggacactcatatcccatgtgctctttcaggaagagctcagt
caaactacaaagacatgtttcccaaaagtatatcggtcaagacatgagacctttcagaag
accaactattcgaaatggcccctgcccaactgtccaaagcgttttcgcatcttttggggg
tttcagagacacggaggccctgccagtcgctggcagtttccccacagagcatttggcctg
gatgcgttggatttgggggacatgtggggttggccatttgacattgactttgtaatcatc
tctatctactctctgcactgggtgatggctttcatcatcttctgtggcctctgctacttc
ctcctcatctaa
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