Chanodichthys erythropterus (predatory carp): 137012879
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Entry
137012879 CDS
T10334
Symbol
nup188
Name
(RefSeq) nucleoporin NUP188 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137012879 (nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137012879 (nup188)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137012879 (nup188)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
HEAT_SCC3-SA
Motif
Other DBs
NCBI-GeneID:
137012879
NCBI-ProteinID:
XP_067232466
LinkDB
All DBs
Position
22
Genome browser
AA seq
1734 aa
AA seq
DB search
MADSELCVRSSRELWTILLGRSALREPAQIEAELNRNWERLLQGLSFYKPPSTSAADKLK
ADKDTAQALKDFGLRISKLLGLDEQQSVQILQCYLQEDYRGTRNTLKAVLQDERQSQALL
LKIADYYFEERLCVLRCVLHLLTYFQDERHPYRAEYANCVSKLEKDLVSNYRQQFESLSK
LEAPTWETHGNLMTERQVSRWFVQCLKEQALLLEILFLYYAYFEMPPNDLSTFTRLFKEQ
GFGQRQTNRHLVDKSMDALVERIGYFSSLILVEGMDIDFLHKCALEDRTEQHQFYDQQDV
CKEVDQMLLTFGDISHHGPVLLAWVLLRHTLHPEEVSSVIRRLGHTTLQLGVFQYLTNML
QALGSAGNNCTASTARMCIYGLLSFVITSFEEDTLGSQQHLINAACEVLAAPSLAELFWE
SKPNMGLGVILDSAVGVFPYKTGPLLQLLTALLSDKSTAKKVYTFLDKMSFYTEAYKHKP
NDVISREDGTLWRRQTHKLLYPLGVGQTNLRMPQGCFGQVCEGKQLSLGEQGVLVRWEYS
YSSWTLFTCEIEMLLHVVSTADVLAHCERVKPILDLVHKIISTDWTVSDCLLPLTSRIYM
LLQRLTSVINPPVDVITSCVNCLIALAARQPGKVWSSLHHTGFLPFASTPLTNMAQTISA
EGMKAGNYGNLLVLIEQPRGEYSVTIAFLRLVTTLVKGQLGSTQSRGLIPCVLLVLKEML
PTYHKWRYNTYGVRERIGCLILELVHAILNLSQEGESEGSAPSLQSLCIYSLANTEAGQA
VVNIMGVGVDTINMVLAAQPSSGGSEGPGQVLIQTVKLAFSVTNNVIRLKPQSDTASPLE
QALTHHGGHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIR
DAFLTRLQSRTEDMRIKVTILEFLTVAVETQPGLIELFLNLEAKDGNEGAKEFSLGEWSC
LSVVLELLDSKQQGKYWCPPLLQRAALAFLHALWQDRRDSALSVLRTKEKFWENLTTPLF
GNLPPPSETTEVCPCVLESCAFVMKIIALEIYYVVSGVLDPSLKAALESFSSKRRYEFWS
DYVRDLVCVACDGEEEGLRSLSESQMLISAWRTLLILSTSHSEVMHLKDDSVRQKLFMDV
LEGTKAALLMSQSVFCLRLGSMMVTLLLILLKQWKSVLVSAPALLTPLSLMMESVLHAEQ
QLMDRTKAKLLSALILALHIQGLNGGEITQLPQLLFCMCEMVQDEALALIDSTRHMIQRG
DVQEDSMETDSPHVQKDQRDSVCVLALHLSKELCRADEDGEQWLQVVRKLPVLPSVLSAL
ELSLRSKQNLYFTEAALHLLLTLARTPQGAAAVAGAGVIQSICLPLLSVYEGPANGANQA
FVRKSQDAPSWPGVYRLSLSLMESLLKTLRYNFINEALDFVGVHQERILQCLNAVRTVQS
LACLDEADHTVGFLLQLSNFCKEWQFHLPQLLRDVQVNLCYLCQTCTYLLHSKKMLHHYL
QAKNGEGLPQGPHPQRAAQPASKEQVEGEREEAESKALQAVQCSLLKILSKTLATLQHFT
PDCCQILLDQSMDLAEYRTLFVLSFTTPAFDSDVAPSFGTLMATINVALSMLGEIEKKKE
PVVSSEDTQALKSLLMFSMENCFYVLISQAVRCLKDPSVLPRDKQRLKQELSSELSTLLS
TLFRFFRRGSPSSPASGLLPSPQTKPPTPGSKGTPEGQEPFIQLVQAFVRHVQR
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcggagctgtgtgtcaggagcagcagagagttatggactatcttgctgggg
agatctgcactccgagaaccggcccaaatcgaagctgaattgaatcggaactgggagaga
cttctgcagggtctgtccttctacaaaccacccagcacatcggccgcagacaagctgaaa
gcagataaagacaccgcacaagctctcaaagactttggactcaggatcagcaaactcctg
ggtttagatgaacagcagagcgtgcagattcttcagtgttaccttcaggaggactacagg
ggcacacgaaacacactcaaggcggtgctacaagatgagagacagagtcaagcgctactt
ctgaagatagcagattattactttgaggagagactgtgtgttctgcgctgcgttctccac
ctcctcacatacttccaggatgagagacatccgtacagggcagagtacgcaaactgtgtt
agtaaactggagaaagatctggtgtccaactacaggcagcagtttgagtctctgtccaaa
ttagaagctccaacatgggagacgcatggaaacctgatgacggagaggcaggtgtcccgc
tggtttgtgcagtgtttaaaggagcaggccctgctgctggaaattttgttcctgtattat
gcatacttcgagatgccacccaatgacctttccaccttcacacggctgtttaaggagcag
ggctttgggcagcggcagacaaatcgacaccttgtggacaagagcatggatgcgctggtt
gaacgcattgggtatttcagttctttgattcttgtggaggggatggatatcgacttcctg
cataaatgtgctctggaggaccgaaccgagcagcatcagttttatgaccaacaggatgtt
tgcaaggaggtggatcagatgctgttgacatttggtgacatctctcaccatggtccggtt
ctgttggcatgggttctgctgcgacacacactgcatccagaggaagtcagctctgtgatc
agacgtttaggacacactacgctgcagctcggagtctttcagtacctcaccaacatgctg
caggcgctcggcagtgctggaaataattgtacagcgagcactgcacggatgtgtatttat
ggtctcctgtcttttgtcatcacctctttcgaagaagacacgcttggcagccaacagcac
ctgatcaatgcagcatgtgaagttcttgctgcaccaagtctggctgagcttttctgggag
tcgaagccaaacatgggtctgggagtgattctggacagtgcagtgggtgtgtttccttat
aagactggacctttactacagctgctcactgcattgctgtctgacaaatctacagctaag
aaggtgtacaccttcttagataagatgtcgttctacacggaggcctataagcacaaaccc
aacgacgtgatctccagagaggatggcactctgtggaggagacagactcacaaactcctc
taccctctgggtgtaggtcagaccaacctgcggatgcctcagggatgtttcggacaggtg
tgtgaaggaaaacagctgtctttgggcgaacagggtgtgcttgtgcgatgggaatattcc
tacagctcatggactctcttcacctgtgagattgagatgctgctgcatgttgtctctact
gcagatgtgctggcacactgtgagcgagtaaagcccatcttggatctggttcataagatc
atcagcaccgattggacggtgtctgactgtctgctgccactcacatcacggatctacatg
cttctgcagaggttgacctccgttattaaccctccagtagatgtgatcacttcttgcgtc
aactgccttatcgctctggctgctcggcagcctgggaaggtttggtccagtctgcatcac
accggcttccttccgttcgcctccactcctctgactaacatggcacagaccatcagtgca
gagggcatgaaggcgggtaattacggcaacctgttggtgttgatcgaacagcccagagga
gagtacagtgtgaccattgcctttttaagactggtgaccacactcgtcaagggtcagttg
ggcagtactcagagcagaggactcatcccatgcgtgctattggttctgaaggaaatgctg
cctacgtatcataaatggcgctacaacacatatggagtgcgagagaggatcggttgcttg
attctagagctggttcatgctattctaaatctgagccaggagggggagtcagagggcagc
gcccccagtttgcagtcgttgtgtatctacagtctggccaacaccgaggcaggacaggcg
gtggtcaacatcatgggcgtgggagtggacacaatcaacatggtgctagcagcacagccc
agcagtggtggttctgagggacctggtcaagttctgatccagacagtgaagttggcgttc
tcagtcaccaacaatgtgatcagactcaaaccgcagtctgatacagcctcacctctggaa
caagctctaacacatcacggtggtcatggcaataacctgatcgctgtgttggcaaagtat
atttaccacaagcacgacccagcgctgccacgacttgctatacagctgctgaaaagactt
gccacggtggctcccatgtctgtgtacgcttgcctgggaagtgacgccgctgcgatcaga
gatgcttttttgacgcggctgcagagcagaactgaagacatgcgtattaaagtcaccata
cttgagtttctcactgtggccgtggagacgcaacccggactcattgagctcttcctcaac
ctggaggccaaagacggcaatgaaggggcaaaggagttttctctgggggagtggagttgt
ttgtcggtggtgttggagttgttggactctaagcagcaggggaagtactggtgtcctcca
ctcctgcagagggcggcactggctttcctccatgcactctggcaggacagacgggacagt
gctctctctgtgctcaggaccaaagaaaaattctgggaaaatctcacaactcctttattt
ggaaacttacctcccccatctgagaccaccgaggtatgtccatgtgttctggagtcttgt
gcctttgtaatgaagataatcgccctcgagatctactatgttgtcagtggcgtgttggat
ccgtcgctgaaagcggctctagagagtttcagcagtaagcgccgctatgagttctggtcg
gattatgtgcgtgatctggtgtgtgtggcgtgtgatggtgaggaggagggtctgcgctct
ctgtccgagtctcagatgctcatctctgcctggaggacccttttaatactctccaccagc
cattccgaggtgatgcatctgaaggatgacagtgtcaggcagaagcttttcatggatgtg
ctggaaggcaccaaagcagcgctgctgatgtctcagtctgtgttctgtctacgtctggga
tccatgatggtcacactgctcctcatcctcctcaaacagtggaaaagtgtgttggtgtct
gctccagctctactgacgcccttgtctttgatgatggagagcgttctgcacgctgaacaa
cagctcatggaccgaaccaaagccaaactcctgtctgctctcatcttagctctgcatata
caaggactcaacgggggagagattacccagcttccccagctgctgttttgcatgtgtgag
atggttcaggacgaagccctggcgttgattgacagcacacgtcacatgatccagaggggt
gatgttcaggaggacagcatggagacagacagcccgcatgtccagaaagaccagagagac
tcagtgtgtgtgttagctcttcatctctctaaagagttgtgtcgggctgatgaggatggt
gaacagtggctgcaggtggtcaggaagctgccggttctgccgtcggttctgagcgctcta
gaactcagcctgcgttccaaacagaacctttacttcaccgaggcagcgcttcatctgctg
ctcacactcgccagaaccccgcagggggcagcagcagtggcaggtgccggagtgattcag
agcatctgtcttcctctcctcagtgtgtatgagggtccagctaatggagccaatcaggcg
tttgtgcgtaagtctcaggacgcccccagctggccaggagtatacagattgagtttgtct
ctgatggaaagtctgctgaaaactctccgttacaacttcattaatgaggcgctcgacttt
gtgggcgtgcaccaggagcgcatcctgcagtgtctgaacgcggtgaggacggttcagtct
ctggcgtgtctggatgaggctgatcacacagttggcttcctgctccagctctccaacttc
tgtaaggagtggcagttccacctgccgcagctgctcagagacgtacaggtgaatctgtgc
tatctgtgtcagacgtgtacgtacctcctccacagcaagaaaatgctgcaccattacctg
caggccaagaatggggaggggcttcctcaagggccacacccccagcgtgccgcacagccc
gcctccaaagagcaggtggagggtgagagagaggaggcggagtctaaagcactgcaggcg
gttcagtgcagcctgttaaagatcctcagcaaaacactggccactttacagcacttcaca
cccgactgctgtcagatattactggaccagtctatggaccttgcggagtacaggactctg
tttgtgttgagtttcaccactcctgcatttgactctgacgtggctccgtcgtttggaact
ctgatggccaccattaatgtggcgctgagcatgctgggagagattgagaagaagaaagag
ccggttgtctcctctgaggacacacaagcactgaagtctttgctgatgttctcgatggag
aactgcttctacgtgttgatctctcaggctgtccgttgtctgaaggatccttcagttttg
cccagagacaaacagagactcaaacaggagctcagctcagagctgagtacactattgtcg
acattatttcgatttttccgccgaggttccccttcctccccagccagcgggctgcttccc
tcaccacaaaccaaaccacccacaccaggatccaagggcacgccggagggccaggagccc
ttcatccagctggtccaagccttcgtccggcacgttcaacgctag
DBGET
integrated database retrieval system
