Chanodichthys erythropterus (predatory carp): 137013289
Help
Entry
137013289 CDS
T10334
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137013289 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137013289 (nup98)
03036 Chromosome and associated proteins [BR:
cery03036
]
137013289 (nup98)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137013289 (nup98)
Chromosome and associated proteins [BR:
cery03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
137013289 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
137013289
NCBI-ProteinID:
XP_067233072
LinkDB
All DBs
Position
22:29481901..29502055
Genome browser
AA seq
1807 aa
AA seq
DB search
MFNKSFGAPFGGGTGAFGTSSTFGQQNTGFGAAGGFGSSAFGATNNTGGLFGTTQNKPGG
LFGSSTFSQPVTSSTSTGFGFGATSGTSNSLFGSTNTGGGGLFSQQNNAFGANKPATFGT
FGTSTSSGGLFGTTNTTSNPFGGTSGSLFGSSSFTAAPPGTTIKFNPPTGSDTMVKGGVT
TSINTKHQCITAMKEYENKSLEELRFEDYQAGRKGPSNPMAAGTGGLFGPTAAATPSTGT
GLFGSSAPNTGFNFGQNKTSFGTSTGAFGTTTGNLFGQPPQQASSLFKPFGSATTTQNNT
FSFGNTNTMGQPNTSSMQGLFGNTAASQAGGLFGNTNTSTATGFGTGIFGQPNTGFGNVG
TQNLFGNKPAGFGTTTTSAPSFGTGTGLFANKPTLTLGTNTNTSTFGFGATGTGGGLFGN
KTATTGLGTGLGTGFGGAVGTGQTSLFGNNQNKLGSTLGSVGTFGTGGFNTGANTLNFGA
TQQPVALTDPSAAAAQQAVLQQQINALAYSPFGDSPLFRNPLSDPKKKEERLKPTNPAAQ
KALTTPTQYKLTPRPATRVRPKALSSSGSSKSQLFDGLDDDEPSLNNGAFMPRKSIKKLV
LKNLNNSSLYNNSGNREVDDLASPSEYPQNGLSLSMDEGETREVGVERSGEDDLEVSKFY
TNPITKPIPHAQPSPLLQDTISEFNMRGTGSHRNGLEASSEDISLAEDSIQEERDEELEA
QKPPHPAGIVLGRVGYYTIPSMEELGRMLNENGECIVENFTVGRKGYGSVFFTGEVNLTN
MNLDEIVHFRRKEIIVYPDDKDKPPVGEGLNRRAEVTLDGVWPNDKTTCCQIKSLERLTE
MNYEGRLEAASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEEEEVPPAKLDLKKLK
TGVPPGIPQLPLTQQQMAPQAQSTAVLELLSRVSELDSDMADITQEHPADSVLGEEDGER
TSVEEHKLRSETPAEHEPMSASSQIASSMGINPHTLQIMKASLFAEDDECDLFQEHGSSK
LIQDVVSPKVLLSGPGRLSIGALLQTKFTSGGGLFSQFPEAPFGVIPQKISKSLASEAPW
PSLGPSFLLPAPPPEPTLRTIGARRLGGPVPLESSITLGKGRLLMDAALFRGRSFRVGWG
PNWTLVHCGDQVSVTETMKEQAAESMGFGFLPKPTKSKPITESLFKVHMEQVVGLEPKQS
AESLALYHRPLEISLKHSTINTDDPCPFIQPERGVDALHGYAEWIVEVNKDTGGDAGLAH
WRQVWTLCAALWGRLGDRDVETEQYSDYQQQLERRRSFSHWLSESSAECIEEEVGRALQR
NHAEAVFSYLTGHCLSKACKLSQKSGDHRLSLMLSQAVGSQFCRDLLALQLSDWNRMQTD
SFIEEERLRIFALLAGKPVWQSTDYCINVCSELDWKRCVAVHLWYMLPPTASVADALAKY
ESAFQGSEEVKRYACPPLPPYVDELELLGLDEEMDETESKKSLYDICFHLLKLYSDRHYS
LQQLLDPSTVTADHLDYRLCWHLWNVLQALNYNHLSTSCQGLLHTSYAAQLESAGLWEMA
IFVLLHIPDSGRRESAVREMLNLHCPLEETEESMEKEQFLTEKLLIPIQWIHQAKAIRAC
REGDKHREALHLYKAGHWNHCHRLVIQHLASDCIINDNHKYLLEFLEGLAVPERSVQIQS
WDTSGRVYLDYIHVIQTLQDIQQTESPGYELERLHTEVTSLCGRIELLPCSKAKDRLAQS
EMAKRVANILRVVLSLQQGGEGTPDPRHIPLCQLAPHIGRLPMPEDYALEELRSLTQSYL
QEYVISH
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcttttggtgctccctttgggggagggacaggagcatttgggacttca
tcaacatttgggcaacaaaatactggttttggagcagcagggggctttggatcttcagca
tttggtgcgacaaacaacacaggaggactgttcgggaccacccagaacaagcctggtggt
ctctttggctcgagcactttcagtcagcctgtcacctcctccaccagtactgggtttggg
tttggtgccactagtggcacatcaaacagcctttttggaagcaccaacaccggaggtgga
ggactgttttcccagcagaacaatgcctttggtgccaacaaaccagccacttttggcact
tttggtaccagcactagtagcggtggattgtttgggacaaccaacacgacatccaaccct
tttggaggaacgtcaggctctttgtttgggtcatcaagtttcactgctgcaccccctggc
acaacaatcaaattcaatccaccaactggtagtgacacaatggtaaaaggtggtgtgaca
accagcattaacaccaaacaccagtgcatcactgcaatgaaggaatacgagaacaaatcc
ttagaggaattgaggtttgaggattatcaggctggaaggaagggtccttccaatcccatg
gcagccggcacagggggcctctttggaccgacagccgcagctactcccagtactggcact
ggactctttggctcatcagctccgaacactggcttcaacttcggccagaacaagacctca
tttggcacgagcactggggcatttgggacaaccacaggaaatttgtttggccagccgccg
cagcaagcttccagtctcttcaaaccgttcggctcagccaccaccacccaaaacaacact
ttctctttcggcaacaccaataccatgggccagcccaataccagcagcatgcaggggctg
tttggcaacacggctgcctctcaggctggaggactttttggaaacactaacacaagtacc
gccacaggctttggcacaggaattttcggtcaacctaacactggctttgggaatgtgggt
acacagaatctttttggtaataagcctgctggatttggcaccaccaccactagtgcaccg
tcctttggcacaggcactggtctgtttgcaaataagcctacactcactctagggactaac
acgaacacttcaacctttggtttcggtgcaactggtacaggtgggggtctttttgggaac
aaaactgctacgacaggactgggaacaggattgggaactggctttggaggagctgtagga
actggccagacgtcattgtttgggaacaaccagaacaagctgggctccactctggggtca
gtgggcaccttcggaactggaggcttcaacaccggagccaacactctgaattttggtgct
actcaacaacctgtggctctgactgatcccagtgcagcagccgctcagcaggccgtcctc
cagcagcagattaacgcattggcctattctccatttggagactcacccctcttcagaaac
ccactgtcagatcccaaaaagaaggaagagcgtctcaagcccacaaatccagctgcccag
aaagccctgactacccctactcaatacaaactgacccctcgtcctgccacccgtgtgcgt
cccaaagctctctcctcctctggctcatccaaatctcagctcttcgatggacttgatgat
gatgaaccctctcttaacaatggagctttcatgcctaggaagagcataaagaagcttgtg
ttgaagaatctgaataacagcagtctgtataacaactctgggaacagagaggttgatgac
ttggcctccccttcagagtacccacaaaatgggctcagtctgagtatggatgaaggagag
accagagaagttggtgtggagagaagtggggaggatgacctagaggtctcaaagttctac
accaacccgatcaccaaacccattccacacgcccagccgagccccttgctacaggacacc
atctcggagttcaacatgcgaggaactggcagtcatcgcaatggcttggaggccagcagt
gaggacatttctctggctgaggattcaattcaggaggaaagagatgaggagctggaggct
cagaaacctcctcacccagctggtatagttcttggccgtgtaggctactacaccatccca
tccatggaagagctgggaaggatgttgaatgaaaatggggagtgtattgtggagaacttc
actgttggcaggaaaggctatgggtcagttttcttcacaggtgaagtgaatcttaccaac
atgaacctggatgagattgtgcacttcaggcgtaaggagataatcgtgtaccctgatgac
aaagacaagcctcctgttggagaagggctaaacagacgtgctgaagtgactctagatggt
gtgtggcccaatgacaagacaacgtgctgtcagatcaagagtctagagaggctgacagag
atgaactacgagggccgtctcgaggcagcctcgcgcaaacaaggcgcccgcttcttggag
taccgacccgaaactggatcctgggtctttgaggtggcccacttctcaaagtatggcctg
caggattctgatgaagaagaagaagtccccccggccaagctggacctgaagaagctgaag
acgggggttcctcctgggatcccacagcttccactgacccagcagcagatggcgccacag
gctcagagtactgcagtacttgagctgctcagccgtgtgtcggagttggacagtgacatg
gctgacattactcaagagcacccagcggacagtgttttgggagaggaggatggagagaga
acttctgtggaggagcacaagctgagatctgagactcctgccgagcatgagcccatgtcc
gcatccagccagattgcttcctcgatgggcatcaaccctcataccttacagattatgaag
gcatctctctttgcagaggatgatgaatgtgacttgtttcaagagcatggttcttcaaag
ctcatacaagatgtggtttcccccaaagttttgctttctggacctggtcggctatcaatt
ggagccctgttacaaacaaagttcacctcaggtggagggcttttttcccagttcccagag
gctccttttggtgtaatacctcagaagattagcaagtccctagcatctgaagccccatgg
ccatcattgggtccatccttcctgttgccggcccctcctccagaacctacgcttcggacc
attggggcccgtaggttaggtgggccagtacctctggagagctctataactttagggaaa
ggccgtttactgatggacgcggctctgttcagagggcggtctttcagagtgggctggggt
cccaactggacactggtgcactgtggagatcaagttagtgtcacagaaacaatgaaggag
caggcagcagagagcatgggttttggtttcttacccaaaccaaccaagagcaaaccgatc
actgaaagtctgtttaaagtgcatatggagcaggtggtcggcctggagcccaagcagtca
gctgagagccttgctctttaccacaggccactggagatcagtctaaagcacagcacaatc
aacacagatgacccctgtcctttcattcagccagagagaggagtggatgctctgcatggt
tatgcagaatggattgtggaggtcaacaaagatacaggaggggatgctggcctggcccat
tggcggcaagtttggactttgtgtgctgctctgtggggtcgtctgggtgaccgagatgtg
gagactgagcaatactcggactaccagcagcagcttgagaggaggaggagcttctctcac
tggctctctgagagctcggctgagtgcattgaggaggaggtgggccgggcccttcagcgc
aaccatgccgaggctgtattcagttaccttaccggtcactgtttaagcaaggcctgcaaa
ctgtcccagaagagtggggaccatcgcctttcactgatgttgtctcaggctgtggggtct
cagttttgtagagatctattggctctgcagctcagtgactggaacaggatgcagacagac
tccttcatagaggaggagaggctgcgaatctttgctttgcttgcaggcaaaccagtgtgg
cagtcaacagactactgtataaacgtgtgctccgagcttgactggaagcggtgtgttgct
gttcatctctggtacatgctgcctcctactgcatctgtagctgatgctctcgccaaatac
gaatctgcatttcagggttcagaggaagtgaaaaggtatgcttgccctcctttacctccc
tatgtagatgaactcgagttgttgggtttggatgaagagatggatgagacggaatccaaa
aagtcactctatgacatctgcttccacctgcttaaactttacagtgacaggcactacagc
ctacagcagctacttgatcccagcacagtaactgctgatcatctggactaccggctgtgc
tggcacctgtggaacgtgttgcaggctcttaactacaatcacctgtccacctcatgccag
ggcttgctgcacaccagctacgctgcccagctggagagcgcaggattatgggagatggct
atcttcgtgctgctgcacatacctgactctggacgtagagagagtgcagtgcgggagatg
ctcaacttacactgcccccttgaggagacagaagagtcaatggagaaggagcaatttctt
acggaaaagttgctgatccccatccagtggatccatcaagccaaggccatccgtgcctgc
agagagggagataaacatcgtgaagccttgcacctttacaaggccggccactggaatcac
tgtcatcggctggtcatccagcacctggcctcagactgcataattaacgataatcataag
tacctgctggaattcctggaggggttggcagtcccagagcgcagtgttcagattcaaagc
tgggacacatctggacgggtctaccttgattacatccatgtcatccagactttgcaggac
atccaacagacggaaagcccaggttatgagctggagcggctgcatacagaagtgacgtct
ctctgtgggagaatagagctcctcccctgctccaaagctaaagaccgacttgcccaatca
gagatggccaaacgtgtggctaacatcctacgagtggttttgagtctccagcagggtggt
gaaggcaccccagatccccgacacatccctctttgccagcttgctccacacattggacgt
ctacccatgccagaggactatgctttagaggaactccgcagccttactcagtcgtacctg
caagagtatgttatcagtcactga
DBGET
integrated database retrieval system
