Chanodichthys erythropterus (predatory carp): 137013533
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Entry
137013533 CDS
T10334
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137013533 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cery01009
]
137013533 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137013533 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
cery03029
]
137013533 (rb1cc1)
Protein phosphatases and associated proteins [BR:
cery01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137013533 (rb1cc1)
Membrane trafficking [BR:
cery04131
]
Autophagy
Autophagosome formation proteins
ULK complex
137013533 (rb1cc1)
Mitochondrial biogenesis [BR:
cery03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
137013533 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
DUF6950
Motif
Other DBs
NCBI-GeneID:
137013533
NCBI-ProteinID:
XP_067233444
LinkDB
All DBs
Position
23:16442522..16462687
Genome browser
AA seq
1624 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQAKYKIAIQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILCDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLLKFDTAYTNYQQ
DFEDIKLKLTKLGTAVSVMAKIPLLECLTRHSYRESLEKSCSPHPRTTDEEDYNEDDEVG
ETSTQSAILCPADGQKNQKTPSPVSASGETSSQTSSSPQDRLKSSCSLKAALQEEEESPE
RGAIPSFNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTECRETITKLDNQ
NMKAIKGLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHA
NQLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLT
ELLERVRVVEALSTVPQMYCLAVVEVVRRKMFIGHYRQWANALVRDGKNLYEAEKAKRET
FGKLFSKLILGKSFLRNRLFRGLDSWPPSSFCTRKPRKFDFELPDISLSDLQYLKSCCPS
EVQPYLRVPTLCDFEPLNHHVEVLHQLVQAAQSVDEMSQTITDLLNEQKISCSQSAQRST
ALTPRSESTTAVTSTSTKTLSTLSLKAPDCQPVALPGPLEDLSPDSIDAQTFDFETIGHP
NMDPVLQQGSLDLDSLAESPESDFMSAVNEFVIEETLMSPNPISDPTSPEMMVESLYSSV
INAIDSKRIQDTTTLQKENSKIAALKLSADRYRSAAEESQNNLRKVKEDLYHFRGLVLKE
QRDFGFSLKTMTIEVRNALNSVRYCHEDEQQSNLQSLKDDYEKQILTLTEELECNRKIVR
DVQRAMLELEGLVERKEKEISQLESDREHSMQELQDHKQTVQDLEKKILKQSEELKAALL
SKDELAGQLDNLHFEIEHGQQKIRQEMENAEKVHLQELETRLNQQHEAELQSFRLEKESA
LEKLVQDNLVKLRDLMDSHSAELKERDGRSKDLEARITELADARCKLEVEMALKEAEMED
MRLQYEEAKSTQEEVLKLEFTTQTTTLQMQIDTLNQQLQKKNEEYEVGLAELRALMRLEK
DHCISELVDRHEKESTLLRREFSALKQKSQDAEKDYEERVQKIQRNHEDQLAALQREKQD
EQRAFQEKEQDLEIVIGDLQAENSLLSGRLEQERVEALQRAEMEKEEAVKAALQEALRDF
QLQKEEIETRLLGQIELLENQLQDRQSTKIVAASVEQTEAGEEAGAALSLDSGQWTEEKA
LLLAKLELLERTKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIINDLTEKLKNVMQQ
QEKDKGLIETLSEDRASILQEKKQMEEELNRLRSTVLVSSSFFPPNPIPVVMEAHGACGP
THTEVLSPSTPDPERLASMAAFKDEERVESAVEASMMTVHDNSMLSEEKQRILILERTLH
MKEEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTL
YFLHSESLTALDLKPATGATRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPW
NKKV
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtatgtgtttcaagtcaacaacggaagcacattaacgtttgacactgaactt
gctgtccaaactgttttggaccttaaacatgccattcaggccaaatataaaattgcaatc
cagcaccaggtgctggtggtcaatggaggggagtgtatggtggcagagaggcgtgtgtgt
agttacagcgccggaacggacaccaacccgatcttcttgttcaacaaagagatgatcctg
tgcgaccgagcgccaaccatccccaaaacgaccttctccattgagaatgagatggagctg
aaggtggaggagtcactcatgatgcctgccgtctttcacaccgtcgcctcccgaactcaa
ctagctgtggaaatgtttgaggttgccaagaagctttgctcgttctgtgagcgtctggtc
catgatgaacaccttcagcaccagggatgggcggccatcatggctaacctggatgactgc
accctgtcctatcaaaaactcctcttgaaattcgacactgcttacacaaattaccaacag
gattttgaagacatcaaattaaaactcaccaagcttggcactgctgtctcggtcatggcg
aagattccactcctagagtgtttaactcggcacagctacagagaaagcttggagaagtcc
tgctcccctcacccaagaaccactgatgaagaggactataatgaggatgatgaagtagga
gaaacatccacccagtccgctatcctctgtcctgctgacggccagaagaatcaaaagaca
ccttcgccggtctccgcttcaggagaaacgtcatcccagacgtcttcctctcctcaggac
agactgaagagcagctgtagtctaaaagcagctctacaggaagaggaggagtctccagag
aggggagccataccctcttttaatgtcacactgttggattggatcaacgttcaggacaga
cctaatgatgtggagtcagtagtgaggaagtgttttgactcgatcaacaggcttgatcca
cgaattatccaaccctttctaactgaatgccgtgagacgattaccaaattggataatcag
aacatgaaggccatcaaaggtcttgaggacagattgtatgcacttgaccagatgatagca
agctgtaaaaagttggttaatgaacagaaggaacttgctcagggatttcttgccaatcag
aagagggctgaaaacctgaaggacacctcggtgctgcctgacctgtgtctgagtcacgcc
aaccagctgatgatcatgctgaccaatcacaggaagctacttgacatcaagcagaagtgt
accactgccaaacaggagctcgccaacaaccttcaagtccgtctcaaatggtgctgctac
gtgatgcttcacgctgatcaggatggagagaagctgcaggctctcctgaggctgctgacg
gagctgctggagcgcgtacgagtggtggaagcgctcagcactgtgccacagatgtactgt
ctcgctgtagtggaggtggtcaggcgcaaaatgttcataggacactacagacaatgggcc
aatgctcttgtcagagatgggaaaaacctctatgaggcagaaaaagcaaaaagggaaacc
ttcgggaagctcttcagtaagttaattttagggaaatcgttcctcagaaatcggttgttt
cgaggactggactcatggccaccctcttcgttttgcactcgaaagcctcgaaagtttgat
tttgagcttccagatatttccctgagtgacctgcagtatctcaagtcctgttgtccttcc
gaggttcagccttacctcagggtccccacattgtgtgactttgagcctcttaaccatcat
gttgaagttctccatcagctggttcaggctgcgcagagtgtggacgagatgtcacaaact
atcacagacctactaaatgaacaaaagatttcctgtagccagagtgctcaaagatccact
gcattaacacccagatctgaaagcacaactgcagtcacctctacctccaccaaaacattg
tccactctcagtttaaaagcaccggactgccaacccgtggcgcttcctggtcccttggag
gacctatcacccgacagcatagatgcccagacctttgactttgaaaccattgggcacccc
aatatggatcctgtattacagcaaggctcgttagacttggactcgttggcagaaagtcca
gagtcagacttcatgtcagctgttaatgagtttgttatcgaggagaccttgatgtcacct
aaccccatcagtgatcctacaagtccagagatgatggtggagtctctctactcctccgtc
attaatgcaatcgatagcaagcgtatccaggacactactacccttcagaaggaaaactca
aagatcgcagctctcaagctatcagcagacaggtaccgttccgctgcggaagaatcccag
aacaatttgaggaaagttaaagaagacctttaccactttcgaggacttgttttgaaggag
caacgagacttcggattctccctaaaaactatgaccattgaggttcgaaacgctctcaac
agtgtcagatactgtcatgaggatgaacaacaatccaatctccagagtttgaaggacgac
tatgaaaaacagatacttactctcacggaagagctggaatgcaatcggaagattgtccga
gacgtccagagagcaatgctggaattggaggggcttgtggagcgcaaggagaaagaaata
tcacagctggagagtgatagggaacattctatgcaagaactgcaagatcacaagcaaact
gtgcaggaccttgagaagaagatcttgaagcaaagtgaagaactgaaagctgctttgctg
tccaaggacgaacttgctgggcagctggataacctgcactttgagatcgagcatggccaa
cagaaaatcagacaggagatggagaatgcagagaaggtgcaccttcaagaactggagaca
cggttgaaccaacaacatgaagcagagctgcaatctttcagattggaaaaagaaagtgca
cttgaaaaacttgtccaggacaacctggtgaagctaagagatctgatggattcccattct
gccgaactcaaggagcgcgacggacgctcaaaagacttggaggctcgcattacagaactt
gcggacgcccgctgcaaactggaagtcgagatggctcttaaagaggccgaaatggaggac
atgaggctccagtatgaggaggccaaaagcacccaggaagaggttttgaaattggagttt
actacccaaacaaccaccttgcagatgcagattgacacgttaaaccagcagctccagaag
aagaacgaagagtacgaggttggcctggccgagctccgagcactcatgaggttggagaag
gaccactgcatctctgaactcgtcgatcggcacgaaaaggagagcaccctgctccgccgc
gagttttcagcgctcaagcagaagtcgcaggatgcggagaaagactacgaggaacgagtc
cagaagatccagcgcaatcatgaggaccagcttgctgccttacagagggaaaagcaggat
gagcagagggctttccaagagaaagaacaagacctagagattgttatcggggacctgcag
gcggaaaactcactactgtcgggaagactggagcaggagagggtggaggccctgcagagg
gcagagatggagaaagaggaggcagtcaaagctgcattacaagaggccttaagagacttt
caactccagaaagaggagattgagacaagactgttaggacaaattgaactacttgaaaat
cagctccaagacagacaatccactaaaatagtggcagcttctgtagagcagacagaggct
ggtgaggaggccggcgctgcattgtcattagacagtggccagtggacagaggagaaggca
ttgctcttggccaaactagagcttctggaacgcacaaagaatgaggagatgcagaacctg
aagacctcacttattgctgaacagcagacgaacttcaatactgttctgactcgggagaaa
ctcaagaaagagcaaatcatcaatgatctcacagagaagctcaaaaacgtgatgcagcaa
caagagaaagataaaggcctgatcgaaacactctctgaggaccgtgcctccatccttcaa
gagaagaaacagatggaggaagaactcaaccgtctgcgaagcaccgtcctcgtctcttca
tctttctttcctccaaatcccatccctgttgtcatggaggctcacggcgcatgtggcccc
acccacacagaagttctgtcaccgtccacccctgacccagaaagattggcgtctatggct
gcattcaaggatgaggagagggtggagtcggccgtggaggccagcatgatgacagtgcat
gacaactctatgctatctgaagagaaacagcgcatactgattttggaaaggaccttacat
atgaaggaggaagagaacaaaagacttagtcaaagattgatgtcacagagtatgtcgtcc
gtgtcgtcacggcactccgagaaaatcgccattcgagattttcaggtgggcgacttggtt
ctcataatcctggacgagaggcacgataattatgttctctttactgttggtcccaccctt
tatttcctgcactcagagtccctcactgcactggacctcaaaccagcgacaggagcaaca
agacggccgtgggttttaggaaaagtcatggagaaggaatattgccaagctaaaaaggcc
caaaaccggttcaaagttcctctcggcaccaaattctacagagtaaaggccgtgccatgg
aacaagaaagtgtaa
DBGET
integrated database retrieval system
