Chanodichthys erythropterus (predatory carp): 137013616
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Entry
137013616 CDS
T10334
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a isoform X1
KO
K05719
integrin beta 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03271
Virion - Rotavirus
cery04145
Phagocytosis
cery04510
Focal adhesion
cery04512
ECM-receptor interaction
cery04514
Cell adhesion molecule (CAM) interaction
cery04517
IgSF CAM signaling
cery04518
Integrin signaling
cery04530
Tight junction
cery04810
Regulation of actin cytoskeleton
cery04820
Cytoskeleton in muscle cells
cery05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
137013616 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137013616 (itgb1a)
04514 Cell adhesion molecule (CAM) interaction
137013616 (itgb1a)
04517 IgSF CAM signaling
137013616 (itgb1a)
04518 Integrin signaling
137013616 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
137013616 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
137013616 (itgb1a)
04530 Tight junction
137013616 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137013616 (itgb1a)
04810 Regulation of actin cytoskeleton
137013616 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
137013616 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cery04131
]
137013616 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cery04147
]
137013616 (itgb1a)
04515 Cell adhesion molecules [BR:
cery04515
]
137013616 (itgb1a)
04090 CD molecules [BR:
cery04090
]
137013616 (itgb1a)
Membrane trafficking [BR:
cery04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
137013616 (itgb1a)
Exosome [BR:
cery04147
]
Exosomal proteins
Proteins found in most exosomes
137013616 (itgb1a)
Cell adhesion molecules [BR:
cery04515
]
Integrins
Integrin beta subunits
137013616 (itgb1a)
CD molecules [BR:
cery04090
]
Proteins
137013616 (itgb1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
RBP_receptor
Motif
Other DBs
NCBI-GeneID:
137013616
NCBI-ProteinID:
XP_067233604
LinkDB
All DBs
Position
23:29084174..29130503
Genome browser
AA seq
802 aa
AA seq
DB search
MDLKLLFISTLLGIICCSRAQQEGNECIKANALSCGECIQVGAKCGWCTDTDFLKQGEPT
SARCDELESLKKRGCSATKIENPHGSQRTLKNKPVTNRKKGADKLRPEDITQIQPQKLSL
NLRSGEPQNIKLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMKEMSKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGQQFNSLVGQQQI
SGNLDSPEGGFDAIMQVAVCGDHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLS
ANSSNVINLIVDAYNSLSSEVILENSKLPEGVTITYQSHCKNGIVNEGENGRRCSNISIG
DEVSFNINITAQGCPKQGKSETIKIKPLGFTEEVEIVLNFICECECHKHGIKNSDLCHNG
NGTFECGACRCNKGRVGRQCECRKDEVSTEDLDKNCRKDNGTDICSNNGECVCGTCECKK
RENPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRVCICDANYTGSACDCSLDTSTCL
ASNKQICNGRGNCECGTCRCTDPKFQGPTCEICPTCPGVCTEHKECVQCRAFGTGEKKDT
CERDCSYFNLIKVKDRDKLPQPVQAFPLMHCKERDANDCWFYYTYAVNNNTEKEVHVVET
LECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTTEN
PIYKSPINKFSNPNYGRKAVAQ
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaagctacttttcatatcaacattattagggatcatttgttgcagccgcgca
cagcaagagggcaacgagtgcatcaaagccaacgctttatcctgtggcgagtgcatacaa
gtgggggctaaatgtggatggtgcactgataccgattttctaaaacagggagaaccgaca
tcagcgcgctgcgatgagctggagtcactcaagaaaagaggctgttcggccaccaagatc
gaaaaccctcacgggagccaaaggaccctcaagaacaaaccagtgaccaaccgcaagaaa
ggagcagataaacttcgacctgaggacataacacagatccagcctcagaaactcagcctc
aaccttagatctggggaacctcaaaatatcaagctaaagttcaagagggctgaagactat
cccatagacctgtactaccttatggacctgtcctactccatgaaggatgacttggagaat
gtcaagaatctagggactagtttgatgaaggaaatgtccaagatcacctcagatttcagg
ataggttttggctcttttgtggagaagactgttatgccgtatatcagcacaactccagcc
aagctcctgaacccctgcacaggggaccaaaactgcacaagccccttcagctacaaaaat
gtgctgaaactcaccagcaatgggcagcagttcaacagtctggtagggcaacagcagata
tctggcaacctcgactcgcctgagggaggatttgatgctatcatgcaggttgctgtctgt
ggagaccacattggctggagaaacgtcacccgtttgttggtgttctctactgatgcaggt
tttcattttgccggagatggcaaactcggtggaattgtgcttcccaatgatgggaaatgc
cacttagaaaacaacatgtacaccatgagccattattatgattacccctccatcgcccac
ttggttcaaaaactgagcgaaaataacatccagaccatctttgcagttacagaggagttt
cagcctgtttacaaagaacttaaaaatttgattccaaagtctgcagtgggaacgctttca
gcaaactccagcaatgttatcaatcttattgttgatgcctacaactctctttcctccgag
gtgatccttgagaacagtaagcttcctgagggagtgactatcacctatcaatcacactgt
aaaaatggaattgtgaatgagggagaaaatgggcggagatgctctaacatctcaattgga
gacgaggtgtcgttcaacattaatatcacagctcaaggctgccccaagcaagggaaatcg
gaaaccattaagatcaagcccttgggctttactgaggaggtcgagatcgtactcaacttt
atttgcgagtgtgaatgtcacaaacacggcatcaagaacagtgacttgtgccataacggc
aatggaacgtttgagtgcggagcctgcaggtgcaataagggacgtgttggcaggcagtgt
gaatgccggaaagatgaggtgtccaccgaggacctggacaagaactgccgcaaggacaac
ggcacagacatctgcagcaataacggcgagtgcgtgtgtggcacttgtgagtgcaagaag
agggaaaatcctgaagaacgctacagcggaaaattctgcgagtgtgacaacttcaactgc
gaccgctccaataataaactctgtggaggacacggccgctgtgaatgtagggtgtgcatc
tgtgacgctaactacaccggaagcgcgtgcgactgctctctggacacctccacctgctta
gcctctaacaagcagatctgtaacggcagagggaattgcgagtgcgggacctgcaggtgc
accgaccccaagttccaggggcccacctgtgagatctgccccacctgccctggagtctgt
actgagcacaaggagtgtgtgcagtgccgggcgtttggcacaggagagaagaaagacacg
tgtgaaagagactgtagctactttaacctcatcaaggtgaaggacagagataaactccct
cagccggtgcaggccttccctctcatgcactgtaaggagagagacgccaacgactgctgg
ttctactacacttacgccgtcaacaacaacacagagaaggaggtccatgtggtggagact
ttagagtgtccggcaggtcctgacatcattcccatcgtggcgggtgtggtcgcaggcatc
gttctgattggtctagccctgctgctgatctggaagctgctcatgatcattcacgaccgc
cgcgagttcgccaagtttgagaaggagaagatgaacgccaagtgggacacgacagagaat
ccaatttacaagagccctattaataaattcagcaacccaaactatggacgtaaagctgtg
gctcaataa
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