Chanodichthys erythropterus (predatory carp): 137013810
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Entry
137013810 CDS
T10334
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cery04040
]
137013810 (trpc1)
Ion channels [BR:
cery04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
137013810 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
137013810
NCBI-ProteinID:
XP_067233864
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Position
23:complement(24659100..24686225)
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AA seq
797 aa
AA seq
DB search
MHISALPYSLSVIMAALYQGTDVSSPDKYLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKRLLEEKRHGELNINCVDVLGRDAVTISIENENLDILQLLLDHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKVIQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELST
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSNEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKILYVLSVVLLWP
LLSVCYLLGPRSRVGQVIHTPFVKFIIHSASYFTFLLLLNLYSLVYNGEKKNLMGPPLQL
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALRVVAHSEFKN
KELDRKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKFL
GLFLLVLISFTIGLTQLYGKDQKDPSTTKNETKDCEGIFCRQQSNDTFHTFMGTCYALFW
YIFSLAHVALFVTRISYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIANHE
DKEWKFARAKLWLSYFNDKCTLPPPFNILPSPKTLCYLVISLSKWICSHTSTGKVKRQNS
LKEWRNLKQKRDENYQKIMCCLVHRYLTATRQKMQSMDQATVENLNDLRQDLSKFRNEMR
DLLGFRTSKYAMFYPRS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgctttgccgtattctctctccgttataatggctgctctatatcagggc
acggacgtgtcctcaccggataaatatctggcgttaaaagacgtcagagaggtgaaggag
gagaccactctggacgagaagctctttctgctggcctgcgagaagggagactactacatg
gtaaagagactcctggaggagaaacgacatggtgaattaaacattaactgtgtggatgtg
cttgggagagatgctgtcaccatttcaatcgagaatgagaatctagacatactgcagttg
ctcttggatcatggctgtcaggccacagatgcattattagtggctattgattcagaagtg
gtaggagcagtcgacatcctgctaaaccatcggcccaggcggtcctccaagccttctatt
gcgaaagtgattcagcgcattcaaaacccagagtattccaccaccatggatgttgctccg
gtcattctcgctgcccacaggaacaattatgagattttgaccatgctattaaagcaagac
atctctctgccccgtcctcacgctgtagggtgcgagtgcactctctgtaatgccaagaac
aagaaggacagtcttcgccactcgaggttccgtctagatatctaccgatgcctcgccagc
ccatccttgatcatgctaacagaagaagaccccatcctgagagcatttgagctcagcact
gatctgaaagagctgagcctggtggaagtggagtttcggaatgattatgaagaacttgcc
aagcagtgcaagatgtttgccaaggacctgctggctcaggcccgcaactctcgcgagctg
gaggtcatcctgaaccacacgtccaatgaggaccacgtagacaagagaggcctgctggag
gaacgcatgaacctcagtcgcctcaaactggccatcaaatacaaccaaaaagagtttgtc
gcccagtccaattgtcagcagttcctgaacacggtgtggttcggcgagatggcgagctac
cgccgcaagcacacatgcttaaagatcctgtatgttttgagtgttgttctgctgtggccg
ctgctgtccgtctgctacctgctgggacctcgttctcgcgtgggccaggtcatccacaca
cctttcgtcaagttcatcattcacagtgcatcttacttcaccttcctactgcttctaaac
ctgtattcactggtctacaatggagagaagaagaacttaatgggtccccctttgcagttg
atagactaccttctcattctctggatcataggcatggtgtggtcagatgtgaagcgtcta
tggtatgagggattagaagatttcctggaagagtcacggaaccagctaagtttcgtcatg
aactcactttatttggccacctttgctctaagagtggtggctcacagcgagttcaagaac
aaggaattagataggaaaaactgggatgcattccatcccatcctggttgctgaagggctt
tttgctttcgccaatgttctgagctatctgcgtctcttcttcatgtacaccaccagctcc
atcttggggcctttacagatctcaatgggccagatgctacaggagtttgggaagtttctt
ggcttattcctgctcgtgctcatctctttcaccattggcctgacacagctgtatggaaaa
gaccagaaggatccatccacaaccaaaaatgaaaccaaggactgtgagggcatcttctgt
cggcagcagagcaatgacacctttcacacgttcatggggacatgttatgccctcttctgg
tacattttttctctggcgcacgtggctctgttcgtcacaaggatcagctacacagaggag
ctgcggtcatttgttggtgctcttatcgtcggaacctacaacattgttgtagtcatcgtt
ctcactaaactcctggtggctatgctgcataagagcttcagacagattgctaaccatgaa
gataaggagtggaagtttgctcgggctaagctgtggcttagctactttaatgacaagtgc
acacttcctccacccttcaacatcctcccctcacccaagactttgtgctacctggtgatc
agcctgagcaaatggatctgttctcacacctccacgggcaaggtcaagagacagaatagc
ctcaaggaatggaggaacctgaagcagaaaagagacgagaactaccagaagattatgtgc
tgtctagtgcaccgttacctgaccgccacaaggcagaagatgcagagcatggatcaggcc
acggtagagaacctcaacgatctgcggcaagacctatccaagttccgcaatgaaatgagg
gaccttttgggcttccgcacttccaaatatgctatgttctaccccagaagctaa
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