Chanodichthys erythropterus (predatory carp): 137014259
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Entry
137014259 CDS
T10334
Symbol
spidr
Name
(RefSeq) DNA repair-scaffolding protein isoform X1
KO
K22806
DNA repair-scaffolding protein
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cery03400
]
137014259 (spidr)
DNA repair and recombination proteins [BR:
cery03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
137014259 (spidr)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF4503
DUF4502
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-GeneID:
137014259
NCBI-ProteinID:
XP_067234589
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Position
23:complement(16745675..16799088)
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AA seq
861 aa
AA seq
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MFVCMWFQRKKNLDMRCVLFPDDVKDNFRKAGKAPARTSTPAAKCWKRCGDSFLDTSVIQ
KLQSEKKSRNAHKVALKSVTGKRDAGTDDLVHIAWSSSEDEEADNDSHPPPSRLTVTQAP
HRPRAHTQHPVDCYRSLRMFSSGVETDDLPSIDSDSELEEDKSASKEHSDCINPVLSPAE
ISDYSSYDDNDEDTEESRAESSLLDAAETSKQSVSEWVRSAQAILQTPQKQTTKSVKTPE
DSSKKRRRFERGGLAERLNRLHSRQRSAISFWRHQCNSTTSAADRPGVLMLRILGVREEC
GMQAAVCDRLPEGEMCVALFNKDTATQLQPAPGDIVHIYPPWQNLVVEGERYPIILNTHF
SQKVCVETKQDNAAVAVEKCRPPPLTRCLWRSGTSQVSTEKSIPCKQVDELNRREVRKSL
LDAVEHCRSSGSQSGPVEVVVQRVYCIPITQSRHRASLQHRSLSKPPESAPQQHIGRLCA
LVQDGYGMFGEVLLQCVSTESEIQQTSEQLEGRVCLLQALRVVQRLTRDKCSLLFSMIDS
LWPPLVDPKSPDDLPQSPCDRVPPPCFCYRLSIQQDHMVPLSRQTESPLYRPPVFQTLRE
ILQDVSLRCCCSFRATVVHKQLLSSNAGNREMLLFVTDPSLQTEPKAEGNRRTVVVCLNP
SCLIWSSVTQALDTLQQQPVLKFRDAVKEHGQIFCLDQTVIQLEPEDPSFSIPRPIILDR
LGPETLPYSLCTVTGVIVAVDESTAFSWPTCSQCESCRLETRGKLKGFLCLECGAVMDEA
TTKMQLEVFLSCSSLSHCNVKVKLQQKTIKSLLNSTRCPEGHSVENVLGSEIGPLSAFIH
VVNRSHTVWMGLEELSFDCAD
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgtgtatgtggtttcagcgtaagaaaaacctggacatgaggtgtgtgttattc
ccagatgatgtgaaggataattttagaaaggcgggaaaagcccctgccaggacatccaca
cctgccgcaaagtgctggaagagatgcggggacagtttcttggacacatctgtcatccag
aagctgcaatcagagaagaagagcagaaacgcacataaagtggctctgaagtctgtgact
gggaaaagagatgctggcacagatgatctggtgcacattgcctggagctccagtgaagat
gaagaagcagacaatgatagtcatcctcctccttctcgactgactgtcacacaggcaccg
catcggcccagagcacacacacaacatcctgttgactgttacaggagtctgcggatgttc
agctctggtgtagagacagatgacctgccctctattgattcagacagcgagttagaggag
gacaaatcagcttcaaaagagcacagtgactgtataaatcctgttctgtcaccagctgag
atttcagactactcatcttacgatgataatgatgaagatacagaggaaagccgagcagaa
tcttccctcctggacgcagccgaaaccagcaagcagtcggtcagcgagtgggttcgatcc
gctcaggcgattcttcagacacctcagaaacaaaccaccaagagtgtcaaaaccccagag
gactcgagtaagaaaaggaggagatttgaaagaggaggtcttgctgaaaggctcaaccga
ctccacagcagacaaagatcagccatcagcttctggagacatcagtgcaactcaaccaca
tcagctgctgacaggccaggtgtcctaatgctgaggattctgggagttcgagaagaatgt
ggcatgcaggctgcagtgtgtgacaggctgccagagggggaaatgtgtgtggctcttttc
aacaaagacacggccacccagctacagcctgcgcccggagacattgtccacatctaccca
ccatggcagaatctggttgtggaaggggaacgctatcccataattctcaacacccacttc
agtcagaaagtctgcgtggagactaagcaggacaacgctgcagtcgctgtggagaaatgc
cgacctccgccgttaaccaggtgcctgtggcggtcagggacgagccaagtgtcaacagag
aaatccattccctgtaaacaggtcgatgagttgaacagaagggaagttcggaagtctctg
ctggacgcagtggagcattgtaggtcgtctggctctcagagtggtcctgttgaggtggtc
gttcagagggtctactgcatacccatcacccaatcccgtcacagagcttctctccagcac
agatcactgagcaaaccaccagaatcagcaccacagcagcacatcggcaggttgtgtgct
ctcgttcaggacggttatgggatgttcggtgaggttcttctgcagtgtgtgtccacagag
tcagagatccagcagacctctgagcagctggagggccgtgtatgcctcctccaggccctg
agggtcgtccagcgtctcacacgtgacaaatgttctctgctcttcagcatgattgacagt
ttgtggccacctctggttgatccaaaatctcctgacgatctgccacagtctccctgcgat
cgagtcccacctccctgtttctgctataggctgagcatccagcaggatcacatggttccg
ttatcaagacagaccgaatctccgctgtaccgaccacctgtatttcagacgctaagagag
atccttcaggatgtatcattgaggtgttgttgcagcttccgggccactgtggtccataaa
caacttctgagctcaaatgcaggcaatagggagatgctgctgtttgtgacagatcccagt
ctccaaacggagccgaaagcagaaggaaacaggagaaccgtagttgtgtgtctgaacccg
tcctgcctgatctggagctcagtaacacaggccctggacaccctgcagcaacaacccgtt
ctgaagttcagagacgccgtgaaggagcatggtcaaatattctgcttggatcagacggtg
atccaactggaaccagaggacccgtctttctccataccacggcccataatactggaccgc
ctgggtccagaaaccctcccatactctctctgcactgtcacaggtgtgattgttgcagtg
gacgaaagcacagcgttctcctggcccacctgcagccagtgtgagagttgccgtttagag
actcgaggaaaactgaaaggattcctctgtttagaatgtggagcagtgatggatgaagcg
accacaaagatgcagctggaggtgtttctgagctgctcctcactgagccactgtaatgtt
aaagtcaagttgcagcaaaagaccattaagtctctcttgaactcgacaaggtgtccggag
ggtcacagtgtggaaaatgttcttgggtcggagatcggtcctctcagcgccttcatccat
gtggtgaacagaagtcacacagtttggatgggtttggaggagttatcctttgactgcgct
gactaa
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