Chanodichthys erythropterus (predatory carp): 137014475
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Entry
137014475 CDS
T10334
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04510
Focal adhesion
cery04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137014475 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137014475 (lamb1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
137014475
NCBI-ProteinID:
XP_067234898
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All DBs
Position
24:20838332..20880754
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AA seq
1785 aa
AA seq
DB search
MLLQLAALLILGAWALADVPELGDVCTEGSCYPATGDLLIGRAHQLSATSTCGLQKPEPF
CIVSHLQEEKKCFVCDSRETYDERMHQVTSHRIENVVTTFAPNRLKTWWQSENGLENITV
QLNLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGKTWQVYRYFAYDCEASFPFISQGPMT
KVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITNLRVKFTRLHTL
GDNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPIDGVGEAVEGMVHGHCMCNHN
TMGLNCERCQDFYHDLPWRPAEGRNTNACKKCNCNHHSDSCHFDMAVYQASGNVSGGVCD
GCEHNTMGHKCEQCKPFFYQHPEKDIRDPNICEPCNCDPVGSLNGGVCDPLTDVSLGLIT
GQCRCKPNVEGERCDQCKQGHYGLSDDPLGCQPCTCNALGTVPGGSPCDTDSGNCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAINNHCSPETGQCQCREHMFGRRCDQVE
SGFYFIALDHYTYEAEDAKFGPGVTVVPRTHPQDRSPTWTGIGFVNVPEGAYLEFSIDNI
PYSMEYDIIIRYEPQLPEQWEEVLMTVVRPRVITADSRCANTMPDDDNQMVSLHPGSRYV
VLPRPVCFEEGLNYTVRLSLSLYSALSDMQSPYTLIDSIVLMPHCKNLDIFSGSGSEGGD
LVTNSAWETFQRYRCLENSQAVVKTPMTDICRNYIFSVSALLHQGVKACQCDPQGSLSTV
CDPSGGQCQCRPNVVGRNCDKCAPATFLFGPQGCRPCDCSPEGSVHSFCHEATGQCECIP
GAYGRQCDRCLPGHWGFPNCRPCTCNGHAEQCDPHTGQCLTCRDHTTGHNCERCLSGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFSGGCYKNLDSNQVFCVCNQGYKGARCEECAPGYYG
NPHEAGGECRACQCNNNIDMTDPESCDARTGACLKCLYHTEGEGCNRCKLGYYGNALTQS
CRKCVCNKMGTAAETCPSQGNCNCDLNSGQCQCHPNVVGQHCDQCAPDTWNLASGKGCEA
CDCDLNHSFGSSCNEIMGQCSCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIVEQQ
CNKATGHCVCVEGVSGPRCDACARGYTGEFPQCERCHQCFAEWDVIVGDLTNQTHRLVQK
VNTIKATGITGPYQATINNVESSANSIRNILAQNPATEPLTEIQELLEKATDLMAKMNTN
LNLTEENLSEISSDNNSTDTKLNSLKEEAQKLEQTVKDLQEQVEFVKNSDIRGARASVNR
YYEQSQKAEARANASTSDPYNLVNQSATLRTETEDLMNQTKKEFSQKQDEFSTKLDNLAG
QLETLDLSELSEKTCGSPAGSENCADSPCGGLSCVDGEGNRKCGGEGCGGLTTLAHNAWQ
KAKDFDLEIISAMEEVDKLSKMVSEAKVKADEAKLNAQEVLAKTNETKKRVDSSNEELRQ
LIKQIRDFLTQDGADLESIEAVANEVLQMQMPTTPAQLQNLTAEIRERVGSLTDVEDILN
QSADDILKAESLLEQARKARKEATDVKDTAEMVKEALKQAERAQSSVTEALKQATADIKG
TQDLLVSVESETSDSELKLSNATRRLLKLESDVALLKEKALNTSTSANITEKEAESINAL
AAQLKKDLDSELKDKYSTVEELITQKAKGVAEAKKRAEELQQEAKNLLLQASEKLQLLKN
LEKSYDENQKLLEDKANELVDLEKAVKDLLQEISQKVTVYSTCLF
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacagctcgcagcccttctaattctaggggcatgggctcttgcagatgtgcct
gagctgggagatgtttgcactgaggggagctgttatcctgccacaggagatcttctcatt
ggaagagctcaccaactctcggccacctcaacatgcggactccagaaacctgagcccttt
tgtatcgtcagtcatttgcaggaagagaagaagtgctttgtgtgcgattccagggagacc
tacgatgagaggatgcaccaagtaaccagccacagaattgaaaatgttgtgactacattt
gctccaaaccgcctcaagacttggtggcagtcagaaaatggcctggagaacatcaccgtc
cagttgaaccttgaggcagagttccacttcacccacctcatcatgacgtttaaaacattt
cgaccggctgccatggtgatcgagcgttcttcggactttggcaagacttggcaagtgtac
cgttactttgcttatgactgcgaggcctccttccccttcatctctcaaggacccatgacc
aaagtggacgatgttatctgcgattctcgctactctgacattgaaccctcaactgagggc
gaggtcatctttagggttttggatccagccttcaggattgatgatccctacagccccaga
atccaaaacatgttaaagatcactaatctgagggtgaagttcactaggctgcacactctc
ggggacaaccttctggactcacgtatagagatcaaggagaagtactactacgcaatctat
gacatggtggtcagaggaaactgtttttgctatggacacgcatctgaatgcgcccccatt
gatggagttggagaggccgtggagggcatggtccatggccattgtatgtgtaatcataac
accatgggtctgaactgtgagcgctgtcaggacttctaccatgacctgccatggaggccc
gccgaaggacgcaacaccaacgcctgtaaaaagtgtaactgcaatcatcactctgattcc
tgtcatttcgacatggccgtgtatcaggcctcgggtaacgtgagcggtggcgtgtgcgac
ggctgcgagcacaacaccatgggacacaaatgcgagcagtgcaagccgttcttctaccaa
catccggagaaagacatccgcgaccccaacatctgcgagccctgtaactgtgatccggtc
ggctctctcaatggcggagtttgtgatccgctgacagacgtgtctctcgggctgatcacg
ggtcagtgccgctgtaagcctaatgtggagggagagcgctgtgaccagtgcaaacagggc
cattacggactcagcgacgaccctctgggatgtcagccatgcacgtgcaatgctttgggg
acagttccaggtggaagcccatgcgatacggactcaggaaactgctactgtaaacgcctg
gttaccggaaggaattgtgaccagtgtctgcctcagcactggggtctcagtaatgatatg
gatggctgcagaccatgtgactgtgatcatggtggcgcaatcaacaaccattgttctcct
gaaacaggccagtgtcagtgtcgcgagcacatgtttggcaggcgctgtgaccaggtggaa
tctggtttttacttcatcgctctggaccactacacttatgaagcagaggacgccaagttt
ggaccaggtgtgaccgttgtcccgagaacacaccctcaggacagatcccctacttggaca
ggcattggattcgtgaatgtccctgaaggtgcctatcttgaattcagcattgacaacatt
ccctactctatggagtatgacatcatcatccgatatgaaccacagctgccagagcagtgg
gaagaagtgttgatgactgtcgtcaggcctcgtgtcattaccgccgacagccgctgtgcc
aacacaatgcccgatgatgacaaccaaatggtgtctctgcatcctggatccaggtatgtg
gtgctgcccaggcctgtatgttttgaagagggcttgaactacaccgtgcgcttgagtctg
tctctatactcggctctcagcgatatgcagtcgccatacacgctcatcgactcgatcgtc
ctcatgccacactgtaaaaacctggatatattctctggctctggatcagagggtggggat
ctggtgaccaacagcgcctgggaaaccttccagcgttaccgctgtttggagaacagccaa
gctgtggtgaaaacccccatgactgatatctgcagaaattacatcttcagcgtttcggct
cttctgcaccaaggagttaaagcctgccagtgtgacccgcagggttctctcagcactgtt
tgtgacccgagcggtgggcagtgccagtgtcgccccaatgtggttggcaggaactgtgac
aagtgcgccccagctaccttccttttcgggccgcaaggctgcaggccatgtgattgcagt
cccgaggggtctgtccactctttctgccatgaggccacgggtcagtgtgaatgtattccc
ggagcgtatgggcggcagtgtgaccgttgtcttcctggacactggggtttccctaactgt
cgcccttgcacttgtaatggccacgctgagcagtgtgaccctcacaccggacagtgtctg
acctgcagagaccacaccactggccacaactgcgagaggtgtttgagcggctactatggt
gaccctgtcctgggctctggagaccactgccgcccctgcatgtgtcctgacggacccggc
agcggccggcagttttccggcgggtgttataaaaatctcgactccaaccaggtgttctgc
gtctgcaaccagggatataaaggtgccaggtgtgaagagtgcgcccctggttattacgga
aacccacacgaggcgggcggagaatgtagggcttgtcagtgcaataacaacattgacatg
acggacccagagtcctgtgacgcccgcacgggcgcctgtctcaaatgcctgtaccacaca
gagggcgagggctgcaaccgttgtaagcttggttattatggcaatgctctgacccagagt
tgcagaaagtgtgtgtgtaataaaatgggcactgctgcggagacgtgtccctctcaaggt
aactgcaactgtgacttaaacagtggacagtgccagtgtcatcccaacgtggtgggccag
cactgcgatcagtgcgccccggacacttggaacttggccagcgggaaaggctgtgaggcc
tgcgactgcgacctcaaccattcttttggctcttcctgcaatgagattatgggccagtgc
tcttgtaaacctggatttggtggcagaacctgccgagagtgtagagaactgttctggggg
aaccctgaggtcaaatgtcacgcgtgtgactgtgacccaagaggcatcgtggagcagcag
tgcaacaaggccacaggtcactgcgtttgtgtggagggtgtttccggaccccgatgtgac
gcgtgcgctcgaggctacacgggcgagttcccacagtgcgagcgctgccatcagtgcttt
gctgaatgggatgtaattgtaggcgacctcaccaatcagacccatagactggtccagaaa
gtcaataccatcaaagccactggcattactggaccctaccaagccactatcaataatgtt
gaaagcagcgccaactcaatccgtaacatcctggcccagaatccagcgactgagcctcta
acggagatccaggaacttctcgaaaaagctactgatttgatggctaaaatgaacaccaac
cttaacctgacggaggagaacttgtccgagatctcatctgacaacaacagcacagacacc
aaactgaactctctcaaagaagaagctcagaaactggaacagacagtgaaagacctgcag
gaacaggtggagtttgtgaagaattcggatattcgaggggccagagccagcgtgaatcga
tattacgagcagtcccagaaggcggaggcccgtgccaatgcctccaccagtgacccatac
aatctggtcaatcagtctgccaccctgcggacagaaacggaggacttgatgaaccagacc
aaaaaagagttcagtcaaaagcaggatgaattttcaacaaaactggacaacctggcagga
cagctagagactctggacctgtctgaacttagtgagaagacatgtggtagtccagctggc
tctgagaactgtgccgactctccctgtggaggcctgagctgtgtggacggggaaggaaac
aggaagtgtggaggagagggatgtggtgggctcactacgctagcccacaatgcctggcag
aaagccaaggactttgacctggagattatcagcgccatggaggaagtggacaagctgtcc
aaaatggtgtcagaagccaaggtaaaagccgacgaagcaaagctaaatgctcaggaggtg
ttggcgaagaccaatgagaccaaaaaacgtgtggacagcagcaacgaggagcttcgccaa
ctcatcaaacagatccgagacttcctcactcaagatggagcggacctggaaagcatcgag
gctgtggccaatgaagttctgcagatgcagatgcccaccacaccagcccagctgcagaac
ctgacagcggagatcagggagcgtgtgggcagcttgacagatgttgaagacatcctcaac
cagagcgccgatgacatcctgaaagcagaaagcttgctggaacaagcccgcaaggccagg
aaggaggcgacagatgtaaaagacacagctgagatggtgaaggaggccttgaagcaggcc
gaacgcgctcagagctctgtaacagaggcgttgaaacaggccactgctgacatcaaggga
acacaagacttgctggtctcggtggagtcagagacatccgactcagagctaaaactgagt
aacgccacccgaaggctcctgaagttggaaagcgatgtagctctgctgaaagaaaaggct
ctcaatacctccacaagcgccaacatcacagagaaagaggctgaaagcattaatgcactg
gctgcacagctcaaaaaggatctggattcagagctgaaagacaagtacagtactgttgaa
gaactgatcacacagaaagctaaaggagtggcagaggccaagaaaagagcagaggaactc
caacaggaagccaaaaatctgttgctacaggccagcgaaaaacttcagcttctgaaaaat
cttgagaagagctatgatgaaaatcagaagctgctggaggacaaggccaatgagctggtg
gatctggagaaggctgtgaaagacctgctgcaggagatcagtcagaaagttactgtctac
agcacctgtctgttttaa
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integrated database retrieval system
