Chanodichthys erythropterus (predatory carp): 137014494
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Entry
137014494 CDS
T10334
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03013
Nucleocytoplasmic transport
cery03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137014494 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
137014494 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137014494 (thoc5)
03041 Spliceosome [BR:
cery03041
]
137014494 (thoc5)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137014494 (thoc5)
Spliceosome [BR:
cery03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137014494 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
137014494
NCBI-ProteinID:
XP_067234934
LinkDB
All DBs
Position
24
Genome browser
AA seq
735 aa
AA seq
DB search
MISSDLFDISVMSSDAVKKRKPKVIRSEGGTPEAKRGRGESDQLSAVSSHVKFRKVRLRQ
VKVTTPAGPRLIGQRKLFTAKNQEVRVYNEEVELEGRDPQQDYMLYKDTCAALAKLMAEI
QELKAGGAKDGNVEIEERRRQSSVHFITLKKLNRLAHMRLKKGRDQTHEAKQRVDVLHLQ
LQNLLYEVMHLQKEIGKCLEFKSQHEEIELVSEEEFFQEAPAEISRPHVTRDDQHQLTLA
RLDWELEQRKRLAEQYKTSLASKEKIQRAIEQKREYLSSLQPGLQNIMQASLPVQEYLSM
PFEHMQKQAEVARHLPPPLYVLLVQVGAYGQACDKNLSVSISGDVDEAKALSRPPDDSQD
DESDSDAEEEQQNTKRRRATVGAQLDDKRKGMLRRHPLSLCVDLKCKDGSVLHLFFYYLM
NLNILTVKTKVSTSADLSGAVSAGELLNTESLLNCLYASDHGKETPNPSNRYQFDKVGIT
TFADYVSDLGHPYVWVQKLGGLQFSSDGSQSGLRGSALSASHMERTIKLLRGRLQARLSL
HKQFSSLEHSIIPVSSECQHLFPAKVISGLTRWTMMSHQEFTELGFVQHVLKAGLVHETD
LFFMAVVERGTARLMAAVVLNPRYPDVSPLFSLSLLWKGERSGRSDDNLRAIESEVNVFR
SELQGPRPGLQLLTNQIQRLCVCLDVYLETESQVCDGSEGPKEFPREKMCLRTARGPSRL
KPFKYNHPQGFFSHR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgatctcttctgatctctttgatatttcagtcatgtcgtcagatgctgtgaagaagcga
aagccgaaggtcatccgaagtgaaggaggaactccagaggccaagcgcggacgaggtgaa
agtgatcagctgagtgcagtcagttcacatgtcaagttcaggaaggtcaggttgaggcag
gtgaaggtcacgactccagccggacctcgtcttatcgggcagaggaagctgtttacagca
aagaatcaggaggtgcgtgtgtataatgaggaggtggagctggagggcagagacccgcag
caggactacatgctgtataaggacacctgtgccgccctcgccaaactcatggcggaaatc
caggagctgaaagccggcggcgcgaaagacggaaatgtagagatcgaggagagacgcaga
cagagcagcgttcatttcattaccctgaagaaactcaaccgcctggcacacatgcgactg
aagaaaggccgagaccagacacatgaggcgaagcagcgagtggatgttctccacctgcag
ctgcagaacctgctctatgaggtcatgcacctgcagaaagagatcggaaaatgtctggag
ttcaaatctcagcatgaggagatcgagctggtcagcgaggaggagttcttccaggaggct
ccggccgagatctcacgccctcacgtcactcgcgacgatcagcaccagctcacgctcgcc
cgcctggactgggagctagagcagaggaagaggttggcggagcagtataagacatctctg
gctagtaaggagaagattcagagagccattgagcagaagagagaatatctgagcagccta
caacctggactgcagaacatcatgcaggcgtctctcccagtgcaggagtatttgtcaatg
ccgttcgagcacatgcagaagcaggcagaggtcgcccgtcacctgccgccccctctgtat
gtgctgttggtccaggtgggcgcgtatggacaggcctgtgacaaaaatctgtctgtgagc
atcagtggagacgtggatgaggccaaagctctgtccagacccccggacgactcgcaagat
gacgaaagtgattcggacgcagaagaggagcaacagaacacgaagcgccggcgggcgact
gttggagctcaactggatgacaagcgtaaagggatgctgagacgccacccgctctccctc
tgcgtggacctcaagtgtaaagacggcagcgtcctgcatctgtttttctattatctcatg
aatctcaacattctgactgtgaagaccaaagtttccacctctgcggatctgtccggggcc
gtcagtgccggggagctgctgaacacagagagtctgctgaactgtctttatgcgtctgat
cacggcaaagagacgcccaacccttccaaccgctaccagtttgacaaagtcggaatcact
acatttgcggattacgtgtcagatctcggacatccgtacgtttgggtgcagaaactgggc
ggcctgcagttctcgtctgatggttcacagtcggggctgagaggaagtgctctgagcgcc
agtcacatggagaggaccataaaactgctgcgaggaagactacaggctcgactgtcctta
cacaagcagttcagctcactggagcacagcatcatcccggtctccagcgaatgccagcat
ctgttccccgctaaagtgatttctggtctcacacgctggaccatgatgagccaccaggaa
ttcactgagctgggcttcgtacagcacgtgttgaaggccggtctggtgcatgagacagat
ctcttctttatggcagttgtggagagaggaacagcacgtctgatggccgctgtggtgttg
aacccccgttatccagatgtctcgcccctcttctcgctctctctgctctggaagggagaa
cgcagcggccgctcggacgataacctgcgggcgattgagagcgaggtgaacgtgttccgg
tccgagctgcaggggccgcgtccgggcctccagctcctgaccaatcagatccagcgtctg
tgtgtgtgtctggatgtgtatctggagacggagagtcaagtgtgtgacggctcagaggga
cccaaggagtttccccgagagaagatgtgcttgcgcactgccaggggtccgagtcgtctg
aagcccttcaagtacaatcatccgcagggcttcttcagtcaccgctga
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