Chanodichthys erythropterus (predatory carp): 137014743
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Entry
137014743 CDS
T10334
Symbol
bmal1a
Name
(RefSeq) basic helix-loop-helix ARNT like 1a
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137014743 (bmal1a)
Transcription factors [BR:
cery03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
137014743 (bmal1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
137014743
NCBI-ProteinID:
XP_067235349
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Position
24:complement(13738327..13751414)
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AA seq
625 aa
AA seq
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MADQRMDISSTMNEFISQSSADLISSSIGTTGMDYTRKRKGSTTEYQIDGFFDDSMDTDK
DKTLGRDDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRM
AVQHMKTLRGATNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVY
KILNYTQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPS
RLCSGARRSFFCRMKCNRPSVKMEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMG
LDEDNEPDNEGCNLSCLVAIGRLHPHIVPQPMNGDIRVKPTEYISRHAIDGKFVFVDQRA
TAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKIKDGSFITLR
SRWFSFMNPWTKEVEYIVSTNTVVSGSMLEGADPSYSQSASSPQSMDSVLTSGDGGGKRP
LQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSSCGSSPLNITATPPPDTCSPGG
KKIQNGGTPELPSAGIVPGPDSIGYPYSNNSLMSDNSHLSIDIMEEPGSSSPSNDEAAMA
VIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaagaatggacatctcctccacgatgaatgagttcatatcccagagctcg
gcagatctcatcagcagttccattggcaccacgggcatggactatacccgcaagaggaag
ggcagcaccactgaataccagattgatggcttttttgatgatagcatggacacagacaaa
gataagacactaggaagggatgaccagcagggccggataaaaaacgccagggaggctcac
agtcagatagagaagaggcgcagggataagatgaacagttttatagacgagttggcatcg
ttagtccccacttgcaatgccatgtctcgcaagttagacaaactcactgtactgcgcatg
gctgtccaacacatgaagacattacgaggtgctaccaacccatacacagaagcaaactat
aaaccagcattcttgtcggatgatgaattaaagcacttgattttaagggctgctgatggc
ttcctctttgttgttggttgtgatcgtggaaagattctcttcgtctcggagtcggtttat
aaaattctcaattacactcagaatgatctgattggccagagtttgttcgactacctgcat
ccaaaagacattgccaaagtgaaagagcagctgtcgtcgtcagacacggctccacgggaa
cgactcatcgatgccaaaactggtctaccagtgaagactgacatcactcctggcccatcc
agactgtgttcaggggcccgccgatcgttcttctgtagaatgaaatgcaaccgtccatct
gtcaagatggaggacaaggactttccctcaacgtgctccaaaaagaaagcagaccgcaag
agtttctgtaccatccatagcactggctatctgaaaagctggccgcccaccaagatgggc
ttggatgaggataacgaacctgataatgagggctgcaaccttagctgtctagtagccatc
ggccgccttcatccgcatatcgtcccccagcccatgaatggcgacatccgcgttaaaccc
acagaatacatctctcgccacgctatcgatggcaagttcgttttcgtcgaccagagggcg
accgccatcctggcgtacttgccccaggagcttctaggaacgtcattttatgagtatttt
caccaggatgatatcggtcacctcgccgagtgccacagacaagtgctacagatgagagaa
aagattaatacaaactgttacaagttcaagattaaagacggctctttcatcactctaagg
agccgctggttcagcttcatgaacccctggaccaaagaggtggaatatatagtctctaca
aacactgtggtctcgggcagtatgcttgaaggagcagaccctagttattcccagtcagcc
tcatcccctcagagcatggacagcgtcttaacatcaggagacggtggggggaaacgtcct
cttcagacggttcctggtattccaggagggactagagcgggtgctggcaagattggacgc
atgatcgctgaggaagtgatggagattcagaggattcgaggctcctcaccctccagctgt
ggctcaagtcctttaaatatcactgccacgcccccacctgacacctgctctccagggggc
aagaagatccaaaacggtggaactccagaactgccttcagcaggaattgtgcctggaccc
gattcaataggatacccatattcaaataattcattaatgagtgataactcgcatcttagt
attgacatcatggaagagcccgggtccagcagccccagtaacgacgaggcagccatggcc
gtaatcatgagccttctagaagcggacgctggccttggtggccctgtggatttcagtgac
ctaccctggcctttgtga
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