Chanodichthys erythropterus (predatory carp): 137015129
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Entry
137015129 CDS
T10334
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
137015129 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cery04121
]
137015129 (rag1)
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137015129 (rag1)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137015129 (rag1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1
RAG1_ZnC2
RAG1_DNA-bd
zf-C3HC4
zf-C3HC4_2
zf-RING_10
zf-C3HC4_3
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
137015129
NCBI-ProteinID:
XP_067235943
LinkDB
All DBs
Position
24:8043705..8048004
Genome browser
AA seq
1063 aa
AA seq
DB search
MEKGRWSSEDAPRASMPDELSHPKFSEWKFKLFRVRSMEKAPLSNETPVEKENQPEVETE
MAGSPGSVMKLCFGGKSKENVENTRGRVDLKLQEIDTHMNLLKSLCRLCGLSIRKAKGPS
HEVQGDLEESSRCALRKMGCKFVTWPEVILKVFKVDVTTDMETVHPSLFCHRCWTAAMRG
GGFCSFTRTHIPDWKPHTSHCNLCFPKKSSFQRVGRKRTKPLKGAHSLPKRIKRDSPETS
GANRLWRQTTENPAGSGGKEWIKLSVQRGQWVKNITQCQKDHLSAKLIPPEVPADLLRAV
ICQVCDHLLSDPVQSPCRHLFCRVCIVRYSRALGPNCPTCNQHLNPSHLTRPAKFFLATL
SSLPLLCPSEGCSDWVRLDSFREHCLNHYHEKESQEEQTPSEQNLNGYLPINKGGRPRQH
LLSLTRRAQKHRLRDLKNQVKMFAEKEEGGDVKSVCLTLFLLALRAGNEHKQADELEAMM
QGRGFGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRNAEKELLPGFH
QFEWQPALKNVSSSWDVGIIDGLSGWTTFVDDVPADTIARRFRYDVALVSALKDLEEDIM
DGLRERGLDDSMCTSGFTVVVKESCDGMGDVSEKHGTGPAVPEKAVRFSFTIMSISIRVE
GEDDGITIFQEQKPNSELSCRPLCLMFVDESDHETLTAILGPVVAERKAMMESRLIVSVG
GLLRSFRFFFRGTGYDEKMVREMEGLEASGSTYICTLCDSTRAEASQNMVLHSITRSHDE
NLERYEIWRTNPFSESADELRDRVKGVSAKPFMETQPTLDALHCDIGNATEFYKIFQDEI
GEVYQRSNPSREERRRWRSTLDKQLRKKMKLKPVMRMNGNYARRLMTREAVEAVCELVPS
EERREALRRLMELYLQMKPVWRSTCPSRDCPDQLCQYSYNSQQFADLLSTTFKYRYDGKI
TNYLHKTLAHVPEIVERDGSIGAWASEGNESGNKLFRRFRKMNARQSKTYELEDVLKHHW
LYTSKYLQKFMEAHKNSAKAMQATFNPEETPDEVDVALEVPDF
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagggaggtggagttctgaagatgctcccagagcctccatgcctgacgaactg
tctcatcctaagttttcggaatggaagtttaagctctttcgggtcagatccatggagaag
gcccctctgtctaatgaaacaccggtggagaaggaaaaccagcctgaggtggagacagag
atggcaggctctccaggcagtgttatgaagctctgttttggagggaagagtaaggaaaac
gtggagaatactagagggagagtggaccttaagctgcaggagattgatacacatatgaat
cttctcaaaagcctgtgtcgcctttgtggcctctcaatacggaaggctaaaggtccgtcg
catgaagtccaaggagacttggaagagtcaagtcggtgcgccttgcgcaagatgggctgc
aagtttgtgacatggccggaagtgatcttgaaggtcttcaaggtggacgtgacaaccgac
atggagacagtacatccgtctttgttttgtcacagatgctggactgctgccatgagggga
gggggtttctgttctttcactaggacccatatcccagactggaagccccacacttcccac
tgcaacctctgcttccctaagaagagctcttttcagcgagtgggaaggaagcggaccaaa
ccacttaaaggtgcacacagccttccaaagagaatcaagagggattccccggaaacttca
ggtgccaatagattgtggagacagaccacagagaatcctgcaggatcaggtgggaaagaa
tggataaaactatcagttcagagaggacaatgggtaaagaatatcacacagtgccagaag
gaccatctgagcgctaagctcatccctcccgaagtcccagcagacttgctacgtgccgtt
atttgccaagtgtgtgatcaccttctttccgaccctgtccagtcaccgtgtcggcacctg
ttctgtcgggtctgcatagtaaggtacagtcgagctttggggccgaactgtcccacctgt
aaccaacacctgaacccatcccacctgaccaggccagccaagttcttccttgccaccctc
agctctctccctctgctctgccccagcgaaggatgcagcgactgggtccgattggactcc
tttagggaacactgcctcaaccactaccatgaaaaagagtcccaggaagaacaaacacct
tcagagcagaatctcaatgggtacttgccaatcaacaaaggtgggcgccctcgacagcac
ctgttgtcgttgacccgtcgggctcaaaagcacaggctgagagacttaaagaaccaggtg
aagatgtttgccgaaaaggaagaaggaggggatgtgaagtctgtctgtttgacgctcttc
cttctggcactgagagccgggaatgaacacaaacaagcagatgaactggaagctatgatg
caaggtaggggatttggtctgcatcctgcagtgtgtttggctataagggtcaacaccttc
cttagctgcagtcagtaccacaagatgtaccgcactgtgaaggccactagtggccgccag
atattccagcccctgcacactctacgtaatgctgagaaagagcttcttcccggattccat
caatttgaatggcaaccagctttaaaaaacgtttccagctcatgggatgtgggtatcatt
gacggcctctctggttggacaacctttgttgatgatgtccctgcggacaccatcgccagg
cgattccgctacgatgtggcactggtttctgcattaaaagacctggaggaggacataatg
gatggactaagagagagggggctagatgacagcatgtgcacctctggctttactgtggtg
gtgaaagagtcatgtgatggtatgggagatgtcagtgagaagcatggaactggtccagca
gttcctgagaaggcagtgaggttttccttcacaatcatgtccatctccatccgagttgag
ggtgaggacgatggcatcaccatcttccaggaacaaaagccaaactctgagctctcttgt
agacctttgtgcctcatgtttgtggatgagtccgaccacgagaccctgacagccatcttg
gggcctgtggtagcagagcggaaagccatgatggaaagtcgacttatcgtatctgttggt
ggtctgctacgctcatttaggttcttcttccggggcacaggctatgatgagaagatggta
cgtgaaatggaagggctagaagcatcaggctccacttatatatgcacactctgcgactca
acccgagctgaagcctctcaaaacatggtgctacattccatcacacgtagccatgatgaa
aatcttgagcgctacgagatctggaggacaaatcctttctctgagtccgctgatgaactc
cgtgaccgggtcaaaggtgtttccgccaagcctttcatggagacccagcctactctggat
gccctgcactgcgacataggcaatgcgaccgaattctacaagatctttcaggatgagatc
ggcgaagtctaccagaggagcaatccgagtcgagaggaacgccgtcgttggcggtcaacc
ctggacaaacagctaagaaagaagatgaaactcaagcctgtgatgaggatgaatggaaac
tatgcccgtcggctgatgacacgtgaggctgtggaggcggtctgtgagctggtcccttct
gaggaacgacgtgaggcactacggagactgatggaactctacctccagatgaagccggtg
tggcgttccacttgtccatcccgagactgccctgaccaactctgtcaatatagctacaac
tctcagcaatttgctgacctcctttccaccacgtttaagtaccgctatgatggaaaaatt
accaactacctccacaagactctggcccatgttcctgagattgttgagagagacgggtct
atcggagcatgggccagtgaaggcaatgagtctgggaacaagctgttcagacgttttcgg
aagatgaatgcaaggcagtccaaaacgtatgaacttgaagatgttctgaaacaccactgg
ctgtacacctccaagtatcttcagaagtttatggaggctcacaagaattcagcaaaagca
atgcaagccacattcaacccagaagagaccccagatgaagttgatgtggctcttgaagtt
ccagatttttga
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integrated database retrieval system
