Chanodichthys erythropterus (predatory carp): 137015171
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Entry
137015171 CDS
T10334
Symbol
amfra
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04137
Mitophagy - animal
cery04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137015171 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
137015171 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cery04121
]
137015171 (amfra)
Enzymes [BR:
cery01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
137015171 (amfra)
Ubiquitin system [BR:
cery04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137015171 (amfra)
Multi subunit type E3
ERAD complex
137015171 (amfra)
LMBR1L-GP78-UBAC2 complex
137015171 (amfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf-RING_Vps41
RING_XB3-XBAT31
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
137015171
NCBI-ProteinID:
XP_067236030
LinkDB
All DBs
Position
24:complement(27300971..27319132)
Genome browser
AA seq
625 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSTVLLAGTILSAYTTVRDSEYSSALTEDSHSGPDEEIKLD
QLENFGNMATSVLLYLITDTLFVWVMVNTACCILMLIAKVIQCIVFGPLRVSEKQHLKDK
FWNFIFYKFIFIFGVLNVQRVEEVVLWCLWFSLLIFLHLMVQLCKDRFEYLSFSPTTPMS
SHVRVLALLVSVLTCCGGLAVLCALVGHLHGMHTVAFMAAECLLVTVRTGHVIIRYSIHL
WDLNHEGTWENKSSYIYYTDFIMELAILCLDLMHHIHMLLFGNIWLSMASLVIFMQLRYL
FHEVQRRIRRHKNYLRVIDNMESRFAVATPEELMANNDDCAICWDSMTTARKLPCGHLFH
NSCLRSWLEQDTSCPTCRMSLNINEGGREREEGQREPLDDNIAAVPGTEARAHLNQHNHF
FHFDGSRIASWLPSFSVEVMHTTNILGIAHANNSQLNAMAHQIQEMFPQVPYHLILQDLQ
LTRSVEVTTDNILEGRIQVPFPTQSVERTPIQGNTAAEESAGASSSSEVTAPEDFEVRGS
RFSKSADERQRMLMQRKEELLQRARRRYLHKKPDEGDLFSSAAADNDDDAMPAMEDEDSD
SVTLRRRRLAAAAERRMQRQEPSPF
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgtttctggagcgcttcccctggcccagtttacagacgtacacagccctg
agcacagttctgctggctgggaccatattgagtgcctacaccacagtcagagactcagag
tactcgtctgcactgacagaagactcccacagcggacccgatgaggaaatcaagctggac
cagctggagaactttgggaacatggccaccagtgtgctcctgtatctcatcacggacact
ctctttgtctgggtgatggtgaacacagcctgctgcatcctcatgctgatagctaaagtg
atccagtgcattgtgttcggaccgctgagagtcagcgagaaacagcatctgaaagataag
ttctggaacttcatcttctacaagttcatcttcatcttcggcgtgctgaatgtgcagcgg
gtggaggaggtggtgctgtggtgtttgtggttctccctgctcatcttccttcatctgatg
gtgcagctctgcaaagaccgctttgaatatctctcgttttctcccactactccgatgagc
agtcatgtgcgagtcttggctctgctggtctctgttttgacgtgctgtggtggtctagca
gtgctctgcgctctagtcggacatcttcatggcatgcacaccgtcgctttcatggcagct
gagtgtttgctggtgacggtacgcacaggacacgtcatcataaggtactccattcacctg
tgggacctgaaccacgagggcacctgggagaacaagagctcatacatctactacactgac
ttcatcatggagttagccatcctctgcctggacctgatgcatcacatccatatgctgctc
tttggaaacatctggttgtccatggctagtcttgtgatctttatgcagctgcgttatctc
ttccatgaggtgcagagaagaattcgccgccacaaaaactacttgcgtgttattgacaat
atggaatccaggtttgctgtggcaacgcctgaagagctgatggctaataacgacgattgt
gccatctgctgggattcaatgactacagcacgcaagctgccatgtggacatcttttccat
aattcctgtctgcgctcttggctggagcaggacacttcctgtcccacgtgccgtatgtca
ctgaacatcaatgaaggcgggagagagcgagaggagggacagagggagccgctggatgat
aacatagctgctgtgccaggaacagaggcccgagcacacctcaaccagcataatcacttc
ttccactttgatgggtcccgcattgccagctggctgccaagtttctctgtggaggtcatg
cacaccaccaacatcctgggtatcgcacatgccaacaactctcagctcaatgccatggcc
catcagatccaggaaatgtttccacaggtcccctatcatctgatcctgcaggatttgcag
ctcacgcgctctgtggaggtcaccactgataacatactggagggcaggatacaggtgcct
ttcccaacacagtctgtggagcgtacacctatacagggaaacactgctgcggaggagtca
gcgggtgccagcagcagttcagaggtcactgccccagaagactttgaggttcgggggagc
cgcttttccaagtctgcagatgaaagacagaggatgctcatgcagaggaaggaggaacta
ctccaaagagctcgcagacgttatcttcacaaaaaaccagatgaaggagatttgttttct
tctgctgccgctgataatgatgatgatgccatgcccgccatggaggacgaagactccgat
tcggtgaccctgcggcgcagaagactggcggccgcagctgagagacgcatgcagaggcag
gagccttccccgttttga
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