KEGG   Chanodichthys erythropterus (predatory carp): 137015253
Entry
137015253         CDS       T10334                                 
Symbol
skic8
Name
(RefSeq) superkiller complex protein 8
  KO
K12602  WD repeat-containing protein 61
Organism
cery  Chanodichthys erythropterus (predatory carp)
Pathway
cery03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cery00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137015253 (skic8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cery03019]
    137015253 (skic8)
Messenger RNA biogenesis [BR:cery03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     137015253 (skic8)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_EML_2 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N eIF2A Beta-prop_EIPR1 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_NWD2_C Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR41 Tricorn_2nd Ge1_WD40 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_NUP159_NUP214 PROPPIN Cytochrom_D1 Beta-prop_WDR75_2nd Beta-prop_LRRK2 WDR54 WD40_like Beta-prop_RIG_1st Beta-prop_DCAF12 Vgb_lyase Beta-prop_IFT122_2nd Beta-prop_pof12 DUF2415 Nucleoporin_N Chorion_S16
Other DBs
NCBI-GeneID: 137015253
NCBI-ProteinID: XP_067236190
LinkDB
Position
24:5614861..5623403
AA seq 305 aa
MSTQYSILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTL
EGHQLGVVSVDISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWAVAFSPDSKY
IATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKHLATGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
SPDDTHFVSSSSDKSVKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHI
YDCPK
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcacacagtacagtatactattcaagcaggagcatgctcatgaagatgccatctgg
acggcagcatggggtcgcagcgagaaagacgggtcagaaaccattgtgaccggctctttg
gacgacctggtaaaagtgtggaaatggtcggatgaaaagctggagctgcagtggacgctg
gagggtcaccagctgggcgtggtgtcggtggacatcagtcagaacggagcgatcgccgcc
tccagctctcttgatgctcacattcggctctgggacctggagactggtaaacagatcaag
tccatggacgcaggcccagttgatgcctgggcggtcgccttttctccggactccaaatac
atcgccaccggcagccatctagggaaggtcaacatcttcggcgtggaaagcgggaaaaag
gagcattcactggacaccagagggaaattcattctgagcatcgcctatagtccagatgga
aagcacttagccactggtgcaatagatggaatcattaatatctttgatattgcgactggg
aaactcctgcacacgctggaaggtcatgcaatgcctatcaggtctctgaccttttctcca
gactctcagctgctggtaaccgcgtcagacgatggctacatcaagatttatgatgtgcag
cacgctaacctggccgggacactcagcggtcacggatcctgggtgctgaacgtggccttt
tcacccgacgacacacactttgtgtccagttcgtccgataagagtgtgaaggtgtgggac
acgagcagcagatcctgtgtgaacacattctttgatcatcaggaccaggtttggagtgtg
aaatacaaccccacgggctcaaaaatcgtctctgcgggtgatgacagagcgatccacatt
tatgactgtccgaaatga

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