Chanodichthys erythropterus (predatory carp): 137017110
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Entry
137017110 CDS
T10334
Symbol
pcdh18b
Name
(RefSeq) protocadherin-18b
KO
K16499
protocadherin delta 2
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cery04515
]
137017110 (pcdh18b)
Cell adhesion molecules [BR:
cery04515
]
Cadherins
Protocadherins
137017110 (pcdh18b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
137017110
NCBI-ProteinID:
XP_067237176
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Position
1:15305912..15311310
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AA seq
1161 aa
AA seq
DB search
MGTTKYPSDRNVLFCKMLLKLILLAVVAHSAWGKTLKYKVLEEQRVGTVIARLKEDVASI
LSKLPSSVSPRFRAMQRGSTPLLSVREEDGEISIATKIDREKLCEKNLNCTIEFDVITLP
TEYLQLFHIQVEVLDINDNAPQFSRAIIPIDISESASVGTRFPLDSALDPDVGENALHTY
SLTRNNFFKIDIRTRTDGAKYADLVVMRELDRETQSSYQLQLTASDSGVPPKSGSTLLKI
SISDSNDNSPVFDEQAYVVNLLENSSLGTLLVDLNATDPDEGNNGKIVYSFSSHVPPKIL
ETFKINPDNGHITLIKKVDYETTSSYEIDVQAQDMGPNSIPGHCKIIIKVVDVNDNKPKI
NINLMTQGKEEVAYISEASPVDTFIALVRVDDSDSGLNGEVVCRLHGHGHFRLQKTYENN
YMILTNVSLDREKRSEYSLTVIAEDHGSPSLSTIKHFTVQVQDENDNPPRFEKSRYEIFK
SENNSPGAYLTSVVATDPDLGSNGQVTYSIVESQVQGSSISTYVTIDPSNGAVYALRSFD
REEVGRLSFTVQARDGGGPASLSSNATVLLTVLDENDNPPIIVAPLLINHTAEVPLWRHA
EPGHLVTIIKATDRDAGANSELTCSIVGGNDEGLFVIDPRRCELRTNGSVEASGHEGFDL
TILVQDRGASIRLSARAVLHISLRDYPESYSLNPSDINNQSTLDVSMIIIISLGAICGVL
LIVMVMFATRCSREQKDPRHSYNCRVAESTYQNHPKKPARQIHKGDITLVPTVNGTLPVR
AHPRSPSASPAPESRQSHHSRQSLNSLVTISSNHVPENFALELAHATPPVEQVSQLLSIL
HQGQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDCEMGRESPLLGEGF
SELFTPDGHHRLHPTMKLCTEECRVLGHSDQCWMPPLPSPASSDYRSNLYIPGEDPQQKA
TPEAPQSGESTLRKKSFSTFGKESEEGEGEAGDGEDLCGTTSLLSEMNSVFQRLLPSSLD
NYTETNETEKATACAAGVGSLERRKGHLPGKPSPATYQQNVAVWAANTHFQNPGHGHAPA
SHMTALVAPLPAPLPAPMATSASSSKWLPAMEEIPENHEEDELESVLGHLHGKRCDSRSE
IMDASELVAEINKLLQDVRQS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaactaaatatcccagcgacaggaatgtactgttttgcaagatgcttctgaaa
cttatacttctggcggtcgtggcgcacagtgcttgggggaagactttaaaatacaaagtt
ttggaggagcagagagttggcacggtgattgccagactgaaagaggatgtagccagtata
ttatctaaactcccgagctcggtgtctccgcgcttccgcgcgatgcagagaggcagcact
cctctactctctgtgcgcgaggaggacggagagatcagcatcgccaccaaaatcgaccgc
gagaagctctgcgagaaaaacttaaattgcactatcgagttcgacgttatcacgcttccc
acggaatacctccagttgtttcacattcaagtggaagtgttggacatcaacgacaacgct
ccgcagttctcgcgcgccataatccccatagacatatcagagagcgcgtctgtgggcacg
cgcttccctttggatagcgcgttggacccggatgtcggcgaaaacgcgctacacacctac
tcgctcacacggaataactttttcaaaatcgatatcaggacgagaacggatggcgcaaag
tatgcagaccttgttgtgatgagagaacttgacagggaaacacagtccagctaccaacta
caactcacagcgtcagactctggcgtaccgccgaaatctggctcaaccctgcttaaaatc
agcatatctgattctaacgataatagcccggtgtttgacgagcaggcttacgtggtcaac
ctcttggaaaattcatcactggggacgctactggtggacctgaatgccacagacccagat
gaaggcaataacggcaaaatagtatactctttcagcagccacgtgcctcccaaaatccta
gagacctttaaaattaatccagataatggccacatcactctaattaagaaagtagactac
gaaactacttcctcgtacgaaatagatgtgcaggctcaggatatgggtcccaactccatt
ccaggccactgtaagataataatcaaagtggttgatgtcaatgacaacaagccaaaaatc
aacatcaaccttatgactcagggcaaagaggaggtggcttacatctcagaggcctcccct
gttgataccttcatcgcattagtgcgcgtggatgacagcgactcaggtctaaatggtgag
gttgtatgccgtcttcatggccacgggcattttcgcttgcagaagacttacgagaacaac
tacatgattctcacaaatgtgtctctggaccgtgagaaacgctctgaatatagcctgacg
gtgatcgctgaagaccacggctcgccaagcctgtccaccatcaaacacttcacagtgcag
gtgcaggatgaaaacgacaaccctcctcgcttcgaaaagagccggtatgaaatcttcaag
tctgagaacaattcgcccggggcatacctgacatcagtggtggccactgacccagatttg
ggctctaacggtcaggtgacctattcaattgtagagagccaggtccaaggtagctctatt
tcaacctatgtgaccattgacccatccaacggggccgtgtatgctctccgaagctttgat
cgggaagaagttggccggctttcgttcaccgtgcaggcgcgggatggcggaggcccagct
tctctgagcagcaatgccactgttttgctcactgtactagatgaaaacgacaacccaccc
atcattgttgctccactactaatcaaccacacagctgaggtgccattatggcggcacgcc
gagcctggtcatctggtgacaatcatcaaggctacagatcgtgatgcaggggccaacagc
gagttgacttgctccattgttggtggtaatgatgaaggactctttgttattgacccacgc
agatgtgagttacgaaccaatggaagcgtagaggcttctgggcatgagggatttgatctc
acaatcctggtacaagacagaggggcatcaattcgactgtcagcaagggcagttctgcac
attagcctgcgggactatccagaaagctactccctgaacccttcagacataaacaaccaa
tcgaccctagacgtgtctatgatcatcatcatctccctcggtgccatctgtggtgtactt
ctcatcgttatggtgatgtttgcaaccaggtgctcgagagagcagaaggacccaagacac
tcctataactgcagagtggctgagtccacctaccaaaaccatcccaaaaaacctgcccgg
cagatccacaagggcgatatcacattggtccccacggttaatggaaccctgcctgtgagg
gcccatcctcgctccccgtcagcctcacctgctccagagagtcgccagagccaccacagc
cgccaatcactcaacagcctggtcaccatctcctccaatcacgtgccagagaatttcgcc
ctagagcttgctcatgctacaccacctgtcgagcaagtctcacagcttctgtccatactt
catcagggccagtaccaacccagacccagtttccgtggcaacaaatacacccggagctac
aggtatgctttgaatgagatggataagttcagcctgaaggacagtggacgaggggatagt
gaggcaggagacagtgattgtgagatgggaagggagtctcctctacttggagaaggcttc
agtgagctcttcactcctgatggacaccacagactgcatccaacgatgaagctgtgcact
gaagagtgtcgtgtcctcggtcactctgaccagtgctggatgcctccattgccttcccct
gcctcctctgattaccgcagcaacctctacatccctggagaagatccccagcagaaagcc
acccctgaagcaccacaatctggtgagtcaacactgaggaaaaagagtttctccacattc
ggaaaggagagcgaggagggagagggggaagcaggtgatggggaagatctttgcggaaca
acttctctgctgtctgaaatgaacagcgtgttccagaggctcctcccctcctcgttggat
aattacacagagactaatgaaactgaaaaggcaacagcctgtgctgcaggggtgggatcg
ttggaaagaaggaagggtcacttacctggtaagccaagccctgccacttatcagcagaat
gtggctgtttgggccgctaatacacacttccaaaatcccggacatggccacgcccctgct
agtcacatgacagccctggtggctccgctccccgcccctctgccagctcccatggcaaca
tcagcgtcctcttcaaaatggctccctgcaatggaagaaattcctgagaatcatgaggaa
gacgagttagagtctgtgctaggtcatttgcacggaaagcgctgcgatagtcgcagcgaa
attatggacgccagcgagctggttgccgaaatcaacaaactccttcaagatgtgaggcaa
agctaa
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