Chanodichthys erythropterus (predatory carp): 137017343
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Entry
137017343 CDS
T10334
Symbol
rfx1a
Name
(RefSeq) MHC class II regulatory factor RFX1a isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cery03000
]
137017343 (rfx1a)
Transcription factors [BR:
cery03000
]
Eukaryotic type
Other basic domains
RF-X
137017343 (rfx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
137017343
NCBI-ProteinID:
XP_067237589
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All DBs
Position
3:complement(25520624..25556735)
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AA seq
945 aa
AA seq
DB search
MTLRLKVKRQRDVASMAFSKCDNTVHCTWNPMATPAYVRELQQTSQPQGGGVTPTSGQAA
TVTAAPQQFLAELQTTGATPSAAPSTGQTTPPPSQAQKSQAIVQAPPAQAPPTQTQYVTA
EIQSSPTQSSNAQNTPQYIVVTVTEGSLHSSDSVSDSSPPAAVVQTGVPTQVVQQVQTAQ
QRSVVQATSQTTKTEPSPQLNVTSLQSVHLTQEVQQQLQQVPVQHVYTNQVQYVEGGDAN
YTTSTIRSSSFPYTETPLYTQTTAGQYYETTPASGSEATSPGTPLTVSVTTGSPGVSMFV
AGTGQIVANPTTAAGGGVTAVVAATGTAANGSGDSGSEANGSSGSYVIQGGYMLAGSGTG
NSGNGHGYPHPTRASPTTVSINEGEDNSVPSADKKLSSGPQVQWLLDNYETAEGVSLPRS
TLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSSL
LRLMEDQQHLAMRQQPFSQKQRLKPVQKVEGITNGMSSGSGQQQQQQQSSGLSDISTQVQ
QYQQFLDASRALPEFPDVDLQGKALPEGIELEHLKSFQLLYREHCEAILDVMVNLQFPLV
ETLWKTFWRFSESQAGDSATLAVHDESEKRLPKSCLVLLCKYEPVLRWSRDCDNTLYQGL
VEMLIPDVLRPIPSALTQAIRNFAKSLESWLTNAMMNIPEEMVRVKVTSASAFAQTLRRY
TSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKLT
LQQQNSLEQWAAWLDGVVSQVLKPYQSSSAFPKAAKLFLLKWSFYSSMVIRDLTLRSAAS
FGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFASLGRSLNPLDPDKEEEEEEEE
DSDDECQELSLQSDVGAIGDESLEPPAKLARTDQRVLFTTGSMDN
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgactctgaggttaaaggttaagagacaaagagatgtagcgagcatggcattttcaaag
tgtgataacacagtccattgcacatggaacccaatggcaactccagcttatgtgagagag
ctgcagcagacctcgcagcctcagggaggaggtgtgactccaacatcagggcaggctgcc
accgtcacggcagctccccaacaattcctggctgaacttcagactacaggggccacacct
tcagcggccccgtccactggccagaccacgccccctccttcacaagcacagaagagccag
gcaatcgtccaggcaccacctgcacaagccccgcccactcagactcaatatgtcacagct
gagattcagagctcacctacacagtccagcaatgctcagaatacacctcagtacattgtt
gtcacagttacagagggttctcttcattccagtgactctgtgtcagattctagtcctcct
gctgctgtagtccagactggagttcctacgcaggtggtgcagcaggttcagaccgcacaa
cagagatcagtagttcaagccacatcacagacaacaaaaactgagccgagcccccagctg
aatgtcaccagcctacagtctgtgcacctgacacaggaggtacaacagcagctccaacag
gtgccagtccagcatgtgtatactaaccaggtgcagtatgtggaaggaggagatgctaac
tacaccaccagcaccattcgttccagcagtttcccctacacagagacccctctgtatacc
cagaccactgctggacagtactatgagacaacccctgcctccggttctgaggccacgtcc
cccggcacccctctcaccgtctctgtgacaacagggtcccctggggtgtccatgtttgtg
gcggggacagggcagatcgtggccaatcccacaacggcggctgggggcggagtcacagct
gtagtggcagccacggggacagcagcgaacggttctggagattccgggagcgaagctaac
gggagcagcgggagctacgtgattcagggcggttatatgctggccggcagcgggaccggc
aacagtggaaacggtcacggttatccgcaccccacccgtgcctctccgaccaccgtgagt
ataaacgaaggcgaggacaatagcgtgccgtcggcagacaaaaagctgtcctctggccct
caggtgcagtggttgttggataattatgagacagcagaaggggtgagtttgccccgctcc
actctctactgccactacctgctgcactgtcaggagcaaaagctggaacctgtcaacgcg
gcatccttcggaaaactcatccgctcggtgttcatggggttgaggaccagacgcctcggc
acacgagggaattccaaatatcactactatggactgcggatcaaagcgagctcatctctg
ctccgactgatggaggaccagcagcacctggctatgaggcagcaacccttctcccagaaa
cagaggttgaagccggtacagaaggtggagggaatcactaacgggatgtcgtcaggatct
ggacagcaacagcagcagcagcagagctcaggtctgtcggacatcagcacccaggtccag
cagtaccagcagtttctagatgcgtccagagctctccccgaattccctgatgttgacctg
cagggtaaagctttaccagagggcattgagctggaacatctcaagagctttcagctgcta
tacagagaacactgcgaagccattcttgatgtaatggtcaaccttcagttccctttggtg
gagactctttggaaaacattttggaggttcagtgaaagtcaggcaggagactcagcaaca
ctagctgtgcatgatgagtcagagaagaggctgcccaagtcatgtttggtgctgctctgt
aaatatgaaccagtgcttcgctggagtcgtgactgcgacaacacgctgtaccagggcctg
gtggagatgctcatcccagacgttctgagacctattcccagtgccttaacacaagccatc
cgaaactttgccaagagtcttgagagctggttgactaacgccatgatgaacattcctgaa
gagatggttcgtgtcaaggtgacgtctgcaagcgcgttcgctcagaccctgcgcaggtac
acctctctaaaccacctggcccaggcagctcgtgctgtcctgcaaaacacagcacagatc
aaccagatgctcagcgacctcaacagagtggactttgccaatgtgcaggaacaggcctct
tgggtgtgccgatgtgaggatcgggtggtgcagcggctggagcaggactttaaactgacc
cttcagcagcagaactctctagagcagtgggcagcctggctggatggtgtggtctcacag
gtcttaaaaccgtaccagtccagctctgcctttccaaaagcagctaaactcttcctgcta
aagtggagtttttacagctcgatggtgatcagagacctgactctccgcagtgctgcaagc
ttcggctcatttcacctaatccgcctgctctatgatgagtacatgtactatctgatagag
cacagagttgcccaggccaagggtgaaactcccattgctgtcatgggagagtttgcaagt
cttggccgaagtctgaacccactcgatcctgataaagaagaggaagaggaggaggaagaa
gacagtgatgatgagtgtcaggagttgtctctgcagtctgatgtgggcgctatcggggat
gaatctctggaaccgcccgccaagctggctcgaaccgaccagagggtgctgttcaccaca
ggaagcatggataactga
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