Chanodichthys erythropterus (predatory carp): 137017520
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Entry
137017520 CDS
T10334
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cery01001
]
137017520 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cery04054
]
137017520 (ciita)
Enzymes [BR:
cery01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
137017520 (ciita)
Protein kinases [BR:
cery01001
]
Serine/threonine kinases: Other
TAF1 family
137017520 (ciita)
Pattern recognition receptors [BR:
cery04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
137017520 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
AAA_25
nSTAND_NTPase5
nSTAND3
NB-ARC
Pox_A32
TsaE
ABC_tran
AAA_24
AAA_16
Motif
Other DBs
NCBI-GeneID:
137017520
NCBI-ProteinID:
XP_067237971
LinkDB
All DBs
Position
3:complement(32646469..32659429)
Genome browser
AA seq
1066 aa
AA seq
DB search
MDYICETDAELQDIVSDPMSELLPDNVLSKYLESILEETEEAIDPNFLDNLSFIIDTDTT
CTQPDQVIGQDKLTNKRSRKRKVDAPSNKTRKDTDGKPLYKRNKKASTCSESPSSEKTPT
ITSQGSVHLSSNTFQNILSIPFSPPPLPSSGGSALQFSICPFTPPLIGTVVPTWPTYVLV
SPQHVSPGTQILPLSPADGTVAPPELTVSVLPVGSSSDRACKSLPSASVDTLSPTKEGNP
QKNIDSPPSKTESKIRPEAPECVKEYIHQIKSRMTDVCCTMRGGLAMGSKYVDVDVTQRK
LLIKSGKNANKCLEKELVVLSDSERKKAKLDRSQLFHNSDSKPKQSVALLGKAGVGKTTF
IQRLCLDWASGSLPQFQFVFLLNCKILDFTQSNYSLKGLLLDLSMSPRCEDSDSVFNHIL
SCPDEVLIIFDSFDHIKDFEGLLQCPAKSPTNTKYTIKQLFSGLFQKEILSGCTILIATR
PKDVLNQVLRKIDSLLELCGFSPEDIELYTSKYFEDASLQESALKKIKNQSYIFSLCSNP
LLCWTTCYLLENQDSCSDDLPSTLTDLYQRVTSKYLQSAMLGNRSLCKRKQPDIPQLCKM
AWEGFKNHNTCVNSANSTELLDCGLKSGILVCYETSERQENHFADLFTQNLLSALHLVQS
KQVNEKMVVANSIVQQKKRKVQGESQDLLQRFVTGLIFQKTPDRVSILDSSVNIKAKRKA
VEAHLKSMKPNNLVPARLLELFHCVYETNGDKFAKLLLKSLPDNLSFCGAQLCPSDVYVI
CHLLQHASAMKRTFSINLQDTCITISGLKELVGLKCIKSFWAHTADTIGLWEDLHQSNDE
LNLKKAIEKFTLNPFKATQGYHIESLPDLVRIHREKKLPMSEFVSALDKGVPALLHLQRL
EFELGVQNGPEVFPKLIEVLPSLHSLQHLDLEKNQIGDSGAEKLSGVLHFLKCLKLLNLS
QNFIGDAGVEKLAKALPSILSLQTLSLYGNAIADSGAEHLALVLPEMKVLQDLDVKFNKF
TDIGATKLSAALKQCTGMKSLELWNDCIPYGVFEHLRLQDSRIRSL
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggactatatctgtgaaacagatgctgaattgcaagatattgtctcagacccaatgtct
gaactcttacctgacaatgtcctctcaaaatatcttgagtccattctggaagaaaccgaa
gaagctattgatcccaacttccttgataacctcagttttataattgacacagacacaact
tgcacacaacctgaccaagtaataggccaagacaaattgacaaacaaaaggtcaagaaag
cgaaaagttgatgcaccttcaaacaaaacccgcaaagatactgatggcaaacccttgtac
aaacgcaacaaaaaagcatcaacgtgctcagaaagcccctcaagtgagaagacgcccacc
attacatcccagggaagtgtccatttgagctcaaacacattccagaatattttaagtatt
ccattcagtccccctcctctgccctctagtggtggttcagcactacagttcagcatctgc
ccttttacgccgcctctgatcggcactgtggtcccgacatggcccacgtatgtgcttgtg
tcgccccaacatgtgagtccaggcactcagatacttcctctttcacctgctgatggcaca
gttgccccaccggagctcacggtttcagtactcccagtcggttcatcctcagaccgtgca
tgcaagagtttaccatcagcatctgtagacacgctctcccctacaaaagaaggaaaccca
caaaagaacattgattccccaccttccaaaaccgaaagtaaaatccgcccagaagcacca
gaatgtgttaaagaatacatacatcagataaagtctcgcatgacagatgtctgctgcact
atgcgtgggggactggcaatgggatcaaaatacgtggatgtggatgtgacccagaggaaa
ctacttatcaaatctggcaagaatgcaaacaagtgtctggagaaagaactggtagtcctc
agtgattcagagcgaaagaaagcaaagctggacaggagtcagttatttcataacagtgat
tcaaaaccaaaacaatctgtcgctctcctcggaaaagctggagtgggaaaaaccacattc
attcagcgtttatgtttggactgggcgagcggcagcctgcctcaatttcagtttgttttt
ttgctgaactgtaaaattttagacttcacacaatctaactacagcttgaaaggtttgctg
ttggatttgtctatgtctcctcgctgtgaggactcagactctgtgttcaatcacattctg
tcctgtcctgatgaagttctcattatctttgacagctttgatcacataaaagactttgaa
gggcttcttcagtgccctgctaaatcacccaccaacactaaatacaccatcaaacagcta
ttttcgggtttgttccaaaaggaaatcctctcggggtgcacaattctcattgccacaagg
cctaaagacgttttaaatcaggtgctgcgaaaaatcgacagccttttggagctatgtggc
ttctctcctgaagacattgagttgtacacatcaaaatattttgaggatgcttccctccaa
gaaagtgcactaaaaaagattaagaatcaaagctacatattcagtttatgctccaacccg
ttactttgttggactacctgctacctgcttgagaaccaagacagctgcagtgatgatttg
ccttcaaccctcacagacttgtaccaaagagtgacctccaagtatctgcaatcggctatg
cttggaaaccgctcattatgtaagaggaaacagccagacatccctcaattgtgcaaaatg
gcatgggagggattcaagaatcacaatacatgtgtaaactctgccaattcaacagagctg
ctggactgcggccttaaaagtggcatacttgtatgctacgaaacatcggagcgacaagaa
aaccactttgcagacctcttcactcagaacctcctgagtgctttgcacttggtgcaatcc
aaacaggtgaatgaaaaaatggtggtggcaaacagcatagtccagcagaagaaacgaaag
gttcagggagagtcgcaggacttgctgcagaggttcgtcacgggattgatcttccagaag
acacctgatagagtcagcatcctggacagcagtgtcaacataaaggccaagagaaaggct
gttgaagcccatctgaagagcatgaagcctaataatttggttcccgccaggttattagaa
ctgtttcattgtgtttatgagaccaacggagacaaatttgccaaactgctgttaaaaagc
ctgcctgacaatctgtcgttctgtggggcacagctttgcccttcagacgtgtacgtcata
tgccatctccttcaacatgccagcgcaatgaagcggaccttctccattaacctgcaagat
acatgtattaccatcagtggcctgaaagagcttgtgggactcaaatgtataaagtcattc
tgggcacatacagcagacaccattggcttatgggaggacttgcatcaaagcaatgatgaa
ttgaatctgaaaaaagccatcgagaaattcaccttgaacccattcaaggcaacacaaggt
tatcacatagagagcctacctgaccttgtccgaattcacagagagaagaagttaccaatg
agtgaatttgtgtctgcgctggataaaggtgtgccagccctcctgcatcttcagagacta
gaatttgagcttggagttcagaacggtccagaagttttccctaaactgatagaggttctg
ccttctctgcattctctccaacatctggatcttgagaaaaaccaaataggagactctgga
gctgagaagctatcaggcgttttacattttttgaaatgtctgaaattgctaaatctgtct
caaaacttcattggagatgctggggtggagaaactggctaaagctctgccatccatcctt
tctctacagaccctcagtctctatggaaatgcgattgctgacagtggagcggaacacctg
gctttggttttaccagaaatgaaagtcctgcaggacttggatgtcaagttcaacaagttc
acagacattggagctacaaagctcagtgctgctctgaaacagtgcactggaatgaagtct
ttggagctgtggaatgactgcattccatatggagtttttgaacaccttcgtcttcaagat
tcacgaataagatcactttga
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