Chanodichthys erythropterus (predatory carp): 137017610
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Entry
137017610 CDS
T10334
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03013
Nucleocytoplasmic transport
cery03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137017610 (thoc6)
09122 Translation
03013 Nucleocytoplasmic transport
137017610 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cery03019
]
137017610 (thoc6)
03041 Spliceosome [BR:
cery03041
]
137017610 (thoc6)
Messenger RNA biogenesis [BR:
cery03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137017610 (thoc6)
Spliceosome [BR:
cery03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137017610 (thoc6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_TEP1_2nd
Beta-prop_THOC3
WD40_Prp19
Beta-prop_EML
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_NOL10_N
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
WD40_Gbeta
CFAP251_N
TRM82_WD
WD40_MABP1-WDR62_2nd
WDR54
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
DSE1_N
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_IP5PC_F
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_like
Beta-prop_VPS8
Beta-prop_HPS5
ASA1
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
137017610
NCBI-ProteinID:
XP_067238129
LinkDB
All DBs
Position
3
Genome browser
AA seq
323 aa
AA seq
DB search
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIAVFSLSAALSPDASEGSQKPILNFTAHD
GPVFSLLSTDTHLLSAGNGEISAWSWAELIKKSTKAAWTRKPNYETSLEIPEINAMIISP
KDNSLIVGGGDNNIHIMDMETGVFKSVLKGHTDYIHCLCFKEREGEILSGGEDGAVRIWD
SRTNRPVHCIEVFKYEECARPQFGKWISCLATDSDWMLCGGGPSLSLWHLRSMSPTSVFP
LPGCQREAVFYQDLIMSVGEGPYVSHCLHGGTVKAQIPCSPSSLNTLALNLKNTEHRVMT
VGGSSHQIDVFTNFSYRAFSLSF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggtccagttgagctcctgcatatgtccgtgttctcgcagagtttctctccctgcggt
cgcttccttgcagcgggaaataactatggagagatcgcagtgttcagtctttcagctgca
ctgagtccagatgcatcagaggggagtcaaaagcccatccttaacttcactgctcatgac
ggtccggtgttctctctgctctccacggacactcatctcctgagtgctgggaatggagaa
atcagtgcctggagttgggcagagctcatcaaaaaaagcaccaaagccgcatggacgagg
aaacccaattatgagactagtcttgaaataccagagatcaatgcaatgatcattagccca
aaggacaacagcttgatagttggtggaggtgacaataacattcacatcatggacatggag
acaggtgtttttaagtctgtactgaagggccacactgactacatccactgcctgtgcttt
aaagaaagggaaggggagatactctctggtggagaggatggtgccgtgaggatatgggac
tcacggacaaatcggccggttcactgtattgaagttttcaagtatgaagaatgcgcacgc
ccccagtttgggaagtggattagctgtcttgctacagactctgattggatgctctgtggt
ggaggcccatcgctctctttatggcaccttcgatccatgtcccccacctctgttttccct
ttgcctggatgtcaaagagaagctgtcttttaccaggacctgatcatgtcagtaggtgag
ggtccatacgtgtcccactgtttacatggaggtactgtgaaagctcagattccctgctct
ccttcatcactcaacacactggctctcaatctcaaaaacactgaacacagggttatgaca
gtagggggcagcagtcaccaaattgatgtgttcaccaacttcagttacagagccttttct
ctgtcattctga
DBGET
integrated database retrieval system
