Chanodichthys erythropterus (predatory carp): 137017767
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Entry
137017767 CDS
T10334
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03440
Homologous recombination
cery03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137017767 (top3a)
03460 Fanconi anemia pathway
137017767 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cery03032
]
137017767 (top3a)
03400 DNA repair and recombination proteins [BR:
cery03400
]
137017767 (top3a)
Enzymes [BR:
cery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
137017767 (top3a)
DNA replication proteins [BR:
cery03032
]
Eukaryotic type
DNA Topoisomerases
137017767 (top3a)
DNA repair and recombination proteins [BR:
cery03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
137017767 (top3a)
FA (Fanconi anemia) pathway
137017767 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
137017767
NCBI-ProteinID:
XP_067238486
LinkDB
All DBs
Position
3:complement(42733534..42742041)
Genome browser
AA seq
1008 aa
AA seq
DB search
MNVLYRSLRVTVHSQFYRQISVNMIRRTQIKKVLCVAEKNDAAKGIAEIMSNGRSRRREG
YSVYNKIYEYEYNLFGQNVTVSMTSVSGHLLGLEFKAPFQKWHSCNPVLLFDAEVEKYCP
ENFIPIKRTLEREVRQCQALVIWTDCDREGENIGFEIIDVCKAVKPNIQVFRARFSEITP
NSIRRACETLTEPNINISDAVDVRQELDLRIGASFTRFQTLRLQKIFPESLSDQLISYGS
CQFPTLGFVVERFKAIQAFVPETFFKIKVVHEPNEEESVEFNWKRHRLFNHTACLVLYQM
CMEDPTAKVISVTSKPKSKWRPLPLDTVELEKLASRKLRISAKETMKTAEKLYTQGFISY
PRTETNMFPQNLNLTLLVEQQTQDNEWGNFAQRILESGGPTPRNGNKSDQAHPPIHPTKY
TNSLQGNEKRLYEFIVRHFLACCSKDAQGQEVTVEIEIAEERFSASGLTIIARNYLEVYP
YDKWYNKVIPLYRPDTTFQPTAIEMVEGQTSPPQLLTEADLISLMEKHGIGTDATHAEHI
ETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLVSEGRKDK
ASVLRYHVAKYKAVFIESVRKAKKLDEALSNYLGPAQEITEQEQGEMEIPLPVRKCPQCN
RDMVLKKKKDSTGMLLSCMGYPACKAAVWFPDTVLEVSRDESICSTCRPHPVHMLKFKFK
RGSLPPMMPLEFVGCIGGCDETLREVLNLKYLRGGEADSASRINNSSSSNQHHVPRISSA
PPSRMENVRPPAPRPRADSNRPPASLPPPRAAQPPASAQGGAIVCNCGQDALLLTVRKEG
PNQGRQFYKCNTGDCKFFLWADQPTEQGAPGGNRGPLSQNFQPPRPSNSFGNMPQQRQNN
RGSGGDEGETMCNCNEPAVTRTVMKDGPNKGRMFHTCGKPRDQQCGFFQWANENVAPATG
FSGGNGGKHPGNKKAGTASNKPPNAKRPRTCGICHEPGHTRVTCPQGQ
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttttgtatagatcactaagagtgacagttcatagtcagttttataggcaaata
tctgtaaacatgatcagacgcactcagattaagaaagtgctttgtgttgctgagaaaaac
gacgcagctaagggcatagcagagatcatgtcaaatgggaggtcgagaagaagagaaggc
tactctgtctacaacaaaatatatgagtatgaatacaacctgtttggccaaaacgtaact
gtaagcatgacatcagtatcagggcatctcttgggtcttgaattcaaagctccttttcag
aaatggcatagttgtaatccagtcctgttgtttgatgctgaggtggaaaagtattgccct
gaaaactttataccgatcaagaggactttggagagagaagtaagacagtgtcaagctctg
gtcatttggactgattgtgaccgagaaggagagaatatcggctttgagatcattgatgtc
tgcaaagcagtgaagccaaacattcaggtcttccgtgcacggttctctgagatcacccca
aactccataagaagagcctgtgagaccctcactgagccgaatatcaacatcagtgatgct
gtggatgtgagacaggagcttgatctccgcattggggcatcgtttaccaggttccagaca
ttacgcttgcagaagatattcccagaatctctctccgatcagctcataagttatggcagt
tgtcagttcccaacccttggctttgtcgtcgagcgttttaaagcaattcaagccttcgtc
cctgaaactttctttaaaatcaaagttgtccatgagcctaatgaagaggaatcggtagaa
ttcaactggaagagacatcgtcttttcaaccacacagcttgccttgtgctgtatcagatg
tgcatggaggatcccacggcgaaagtgatatctgtaacaagtaaaccaaaaagcaaatgg
cgacctttaccccttgacactgtggaacttgaaaaactggcttcaagaaaattgaggata
agtgccaaagaaaccatgaaaacggcagaaaagctgtacactcaagggtttatcagttat
cctcgcactgagaccaacatgtttccacagaacctgaaccttaccctgctggttgagcaa
cagacacaagataatgaatggggaaattttgctcagcgcattttagaaagcggtgggccc
acacctcgaaatggaaacaaatcagatcaggcccatccccctattcaccccaccaaatac
accaacagtttacagggaaatgaaaagcggctatacgaattcattgtacgtcacttcctg
gcctgttgctccaaagatgctcagggtcaagaggtgacggttgaaattgaaatagctgaa
gagagattctctgctagtggattgacaatcatcgcgcgcaattatctggaagtgtaccct
tatgacaagtggtacaataaggtaattccattatatagacctgacaccacgttccagccc
acagcgattgagatggtggaaggacagaccagtccaccacagcttctgacagaggccgat
ttgatatcgctcatggagaagcatggcattggtactgatgcaacacatgctgaacacatt
gagaccataaagagtcgtatgtacgtggggctgacggctgaccagaggttccttcctgga
gagctcggcatgggtcttgttgaagggtataactctatggggtatgagatgtctaaacca
gacctgagagcggagctggaggcggatcttaaacttgtgtcagagggccggaaggacaag
gcttctgtcctcagatatcatgtggcaaaatacaaagctgtttttattgaatccgtgagg
aaggcaaagaaattggatgaagccttgtccaattatctgggcccggctcaggagattacc
gaacaggagcaaggagagatggagataccattacctgtgcgaaagtgtcctcagtgtaac
cgtgacatggtgctgaagaagaagaaagacagcacagggatgcttctttcatgtatggga
tatccagcttgtaaagcagccgtgtggtttccagacacagttctggaggtcagcagagat
gagagcatctgttcgacgtgccgtccacatccggtccatatgctgaagtttaaattcaag
agaggaagtttgccacctatgatgccccttgaatttgttggctgcattggaggatgtgat
gagactctcagagaggtcttgaacttaaaatatctcagaggaggagaagcagattctgcc
tctcggattaataacagctctagttcaaatcagcatcatgtacctagaatcagctcagca
cctccatccaggatggagaacgtgagacctccagcacccagaccccgagccgatagcaac
cgcccccctgccagtctgccacctcctcgggcagcacaaccaccagcttcagcccagggc
ggtgccattgtgtgtaactgtggtcaggatgcccttcttctcactgtacgcaaagagggt
cccaaccaaggccgtcagttttacaagtgtaacacaggggattgtaaattcttcctgtgg
gctgaccagccgactgagcagggagcgcctggaggaaacagagggcccctaagtcagaat
tttcaacctcccaggccttcaaatagctttgggaacatgcctcaacagaggcaaaacaac
agaggatctggaggtgatgaaggtgaaaccatgtgtaactgtaatgagcctgcagttacc
aggactgtcatgaaagatgggccaaacaagggccgaatgttccacacctgtgggaaacca
cgtgatcagcagtgtgggttcttccagtgggcaaacgaaaatgtggctccagccacaggt
ttttctgggggaaatggtggtaaacatcctgggaacaaaaaggccggcactgcctcgaac
aagcctcccaatgccaaaaggccgagaacctgtggaatatgtcatgagccgggtcatacc
cgggtcacctgtcctcagggccagtga
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