Chanodichthys erythropterus (predatory carp): 137017928
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Entry
137017928 CDS
T10334
Symbol
srsf2b
Name
(RefSeq) serine/arginine-rich splicing factor 2b
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery03040
Spliceosome
cery05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137017928 (srsf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137017928 (srsf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cery03041
]
137017928 (srsf2b)
Spliceosome [BR:
cery03041
]
Common components
Common spliceosomal components
SR proteins
137017928 (srsf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_8
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
137017928
NCBI-ProteinID:
XP_067238805
LinkDB
All DBs
Position
3:51012319..51020521
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AA seq
217 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGAILDGRELRVQMARYGRPPDSYYGGRRGGGAARRHGGHGRRSR
SPRRRRRSRSRSRSRSRSRSRSRYSRSRSRSYSRSRSKSHTPRKRKSKSPSRSRSRSRSK
SRSRSRSRTPASNRGSKSRSRSKSQPKSAGDEGPASS
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggcaggcctccgcccgacgtagagggcatgacatcgttaaaagtggataat
ttaacgtaccgcacgtcgccggagaccctgaggcgcgtctttgaaaagtacggccgagtc
ggggacgtttatattccccgagatcgatacacgaaagaaagccgggggttcgccttcgtg
cgctttcacgacaagagggatgccgaagacgcgatggacgcgatggatggagcaattctg
gacgggcgcgagctccgcgttcagatggcccgctatggcaggccgcccgactcctactac
ggcgggcgtcgcggcggaggagccgccaggagacacggcggacatggccgccgcagccgg
agtccgaggcgtcggagacgcagccgttccagaagcaggagccgctctcgttcccgcagc
cgctcccgttacagcaggtcccggtcccgctcctattcccgctctcgctccaagtctcac
actccccgcaagaggaagtccaagtctccttccaggtctaggtcacgttctcgatccaaa
tccaggtcccgttccagaagccgcacacctgcatcgaacagagggtctaagtccaggtcg
aggtctaaaagccagccaaagtctgctggggatgaaggacctgcatcatcctaa
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