Chanodichthys erythropterus (predatory carp): 137017990
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Entry
137017990 CDS
T10334
Symbol
ush1ga
Name
(RefSeq) pre-mRNA splicing regulator USH1G
KO
K21878
Usher syndrome type-1G protein
Organism
cery Chanodichthys erythropterus (predatory carp)
Pathway
cery04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cery00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
137017990 (ush1ga)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cery03037
]
137017990 (ush1ga)
Cilium and associated proteins [BR:
cery03037
]
Primary cilia and associated proteins
USH complex and associated proteins
137017990 (ush1ga)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_2
SAM_7
Hydro_N_hd
Motif
Other DBs
NCBI-GeneID:
137017990
NCBI-ProteinID:
XP_067238910
LinkDB
All DBs
Position
3:54110610..54124469
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AA seq
473 aa
AA seq
DB search
MNDKYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLDALRLIVGRGGNPDK
CDIWGNTPLHQAASNGHLNCLSFLVSFGANVWCLDNDYHTPLDMAATKNHMDCVRYLDSI
AAKQTALNPKLVSKLKDRAFRDAERRIKECVKLQQKHRRRMERKFHRETTEASVSDAMSF
SSYASSTLSRKLHHFNTATNVPYSQATLHATARGKTKIQKKLEKRKQGDGTFKIYEDGRK
SVRSLSGLQLGNDVMFLKQGTYVNPKDRSRRNIRDMFPSDNEDAVSRAISEPDLHGQDVD
YSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGLFGIGSRDEGSLAGSERVDNVRLHSRMH
RVPSLDDDSIGSAHSLQERNVQELPWDEVELGLDDDDEPDTSPLEVFLAAQNMNEFVPIF
KREKIDLEALLLCSDSDLKSIHIPLGPRKKIIDTCQRRLETIEDPGCIEDTEL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaaataccacaaggcagctcgggatggctaccttgacttgcttaaagaagcg
acgcggaaggatctgaacgctccggatgaggatggcatgacaccgacgctatgggccgcg
taccacggcaacctggacgcgctgcggctgatcgtcgggagaggggggaacccagacaag
tgtgacatatggggaaacacgccactccaccaggctgcctccaatggccatctcaactgc
ctgtccttcctggtgtcgtttggtgccaatgtgtggtgcctggacaacgactaccacacg
cctctggacatggctgccaccaagaaccacatggattgtgtacgctatctggactccatc
gctgccaagcagacagccctcaacccaaagctagtaagcaaactgaaggaccgggctttc
cgtgatgctgaacggcgcatcaaggaatgtgttaaactgcagcagaagcaccgcaggcgc
atggagcgtaaatttcatagagagacaacggaagcatcagtctcggatgccatgagcttc
tccagctacgccagcagcaccctgagtcgcaagttacaccacttcaacactgccactaat
gtgccatactcccaggctactcttcatgccacagccaggggcaaaactaagatccaaaag
aagcttgagaagaggaagcaaggtgatgggacattcaagatttacgaagatggcaggaag
agtgtccgttctttatctggcctacaactaggcaatgacgtcatgtttctgaagcagggt
acgtacgtcaaccctaaggaccgttctcgtcgcaacatacgtgacatgttccccagtgac
aatgaggatgccgtctcacgtgccatcagtgaacccgacctgcatggtcaagatgtggac
tactcagagatcagcacagactcaggccacgactctctcttcaaccgtcctggcctgggt
accatggttttccgccgcaactacgtgagtggtggactttttggcatcggtagcagagat
gaaggcagtctggcaggcagcgaacgggtcgataatgtgcgcctacacagccggatgcat
cgtgtgcccagtctggatgacgacagcattggaagcgcccatagcctacaagagaggaat
gtgcaggagctgccatgggatgaagttgagctggggctggatgacgatgatgagcctgac
actagcccattggaagtgttcctggccgcacaaaacatgaacgagttcgttcctatcttc
aaaagagaaaagattgatctggaggccctgttgctatgctccgatagtgacctcaagagc
attcacatccccttggggccccgcaagaagatcatagacacctgccagcgccgactggag
accattgaggacccaggttgcatagaagatactgagttgtga
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